Paper · 2025 · BMC Plant Biology

Rootstock-mediated salinity resilience in cucumber (Cucumis sativus L.): integrating physiological traits, genomic stability and machine learning

Ömer Faruk Coşkun; Alim Aydın; Seher Toprak; et al.

8
claims
16
verbatim quotes
7
citations
4
research areas
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Open access · cc-by-nc-nd

Abstract

BACKGROUND: Salt stress is a major abiotic constraint in cucumber (Cucumis sativus L.), reducing biomass, photosynthesis, and genomic stability. Grafting onto salt-tolerant Cucurbita rootstocks is a promising strategy to enhance plant resilience. Recently, machine learning (ML) has provided new opportunities to capture complex trait interactions and identify key predictors of stress tolerance. RESULTS: We evaluated two cucumber cultivars (Cagla F1, Minimix F1) grafted onto four interspecific Cucurbita maxima × Cucurbita moschata rootstocks (TZ148, Devrim, Cremna, Kublai) under 0 vs. 100 mM NaCl for 30 days in a soilless fertigation system. Morphological, physiological, and molecular traits were evaluated, including biomass accumulation, chlorophyll content (SPAD) and incident photosynthetically active radiation (PAR), and genomic template stability (GTS) using ISSR markers. Salt stress reduced growth and biomass (leaf FW - 56%, root DW - 74%) and lowered SPAD and relative water content (RWC); grafting-especially with TZ148 (and to a lesser extent Kublai)-mitigated these losses by maintaining chlorophyll content (SPAD) and biomass under salinity. Grafted combinations, especially TZ148/Cagla, maintained higher stability (GTS: 88%, GC: 0.07), confirming the protective role of grafting. ML approaches, including Principal Component Analysis (PCA) and Random Forest (RF), clearly separated control vs. salinity and, while grafting types showed only partial separation, RF consistently ranked root/stem fresh weight, SPAD, leaf area, and fruit weight as top predictors. CONCLUSION: Grafting significantly improved cucumber tolerance to salinity by sustaining biomass, photosynthetic capacity proxies (SPAD), and genomic integrity. ML-based analyses added predictive power and biological interpretation, confirming grafting with appropriate rootstocks as a sustainable strategy for cucumber production in saline nutrient solution conditions.

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Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt stress reduced cucumber leaf fresh weight by 56%.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Treatment
Salt stresse0
Outcome
leaf FWe0
Direction
reducede0
Value
56%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Salt stress reduced growth and biomass (leaf FW - 56%, root DW - 74%)”

✓ located verbatim in the source · abstract, characters 887–956 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt stress reduced cucumber root dry weight by 74%.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Treatment
Salt stresse0
Outcome
root DWe0
Direction
reducede0
Value
74%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Salt stress reduced growth and biomass (leaf FW - 56%, root DW - 74%)”

✓ located verbatim in the source · abstract, characters 887–956 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt stress lowered cucumber SPAD and relative water content.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Treatment
Salt stresse0
Outcome
SPAD and relative water content (RWC)e0
Direction
lowerede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Salt stress reduced growth and biomass (leaf FW - 56%, root DW - 74%) and lowered SPAD and relative water content (RWC)”

✓ located verbatim in the source · abstract, characters 887–1006 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Grafting, especially with TZ148, maintained cucumber chlorophyll content and biomass under salinity.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Treatment
grafting-especially with TZ148e0
Outcome
chlorophyll content (SPAD) and biomasse0
Direction
maintaininge0
Qualifier
under salinitye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“grafting-especially with TZ148 (and to a lesser extent Kublai)-mitigated these losses by maintaining chlorophyll content (SPAD) and biomass under salinity”

✓ located verbatim in the source · abstract, characters 1008–1162 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Grafted combinations, especially TZ148/Cagla, maintained higher genomic template stability of 88%.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Treatment
TZ148/Caglae0
Outcome
stabilitye0
Direction
highere0
Value
88%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Grafted combinations, especially TZ148/Cagla, maintained higher stability (GTS: 88%, GC: 0.07)”

✓ located verbatim in the source · abstract, characters 1164–1258 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

PCA and RF separated control and salinity conditions.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Outcome
separated control vs. salinitye0
Comparator
control vs. salinitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ML approaches, including Principal Component Analysis (PCA) and Random Forest (RF), clearly separated control vs. salinity”

✓ located verbatim in the source · abstract, characters 1304–1426 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Grafting types showed only partial separation in ML analyses.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Outcome
partial separatione0
Comparator
grafting typese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“grafting types showed only partial separation”

✓ located verbatim in the source · abstract, characters 1438–1483 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

RF ranked root and stem fresh weight, SPAD, leaf area, and fruit weight as top predictors.

Taxon
cucumber (Cucumis sativus L.)Cucumis sativuse1
Outcome
top predictorse0
Comparator
root/stem fresh weight, SPAD, leaf area, and fruit weighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“RF consistently ranked root/stem fresh weight, SPAD, leaf area, and fruit weight as top predictors”

✓ located verbatim in the source · abstract, characters 1485–1583 · show in text ↑
e1

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 57–86 · show in text ↑

salinity · physiology: water · Cucumis sativus (cucumber)Positive and negative results

10 papers: 1 positive, 9 negative or no effect

8 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative

6 papers more in this group

See all 10 papers →

grafting · physiology: pigments · Cucumis sativus (cucumber)Results agree

11 papers: 11 positive, 0 negative or no effect

10 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.