Paper · 2026 · Industrial Crops and Products

Physiological, biochemical, and multi-omics analyses reveal the mechanism underlying strigolactone-mediated waterlogging response in rapeseed

Ximin Zhi; Xiaohua Bian; Yuexia Zhang; et al.

13
claims
34
verbatim quotes
1
citations
4
research areas
✓
Open access · cc-by-nc-nd

Abstract

Global climate change has caused an increasing frequency of extreme rainfall events, which aggravates the waterlogging risk to pose serious threats to the production of rapeseed. Strigolactones (SLs) have been demonstrated to enhance crop stress resistance by modulating physiochemical processes and gene expression. However, little is known about the molecular mechanisms through which SLs alleviate waterlogging damage in rapeseed. Here, we comprehensively analyzed the regulatory effects of SLs on the phenotypic and physiochemical characteristics of waterlogged rapeseed and the underlying molecular mechanisms. The results indicated that waterlogging substantially inhibited the aboveground growth and root development, as well as reduced the net photosynthetic rate, stomatal conductance, mesophyll and spongy tissue thickness, APX activity, and N, P, and K contents in seedlings. Conversely, SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways, upregulated GPX , GSH , and 4CL genes, increased amino acids and secondary metabolites, enhanced antioxidant enzyme system and absorption efficiency of N, P, and K elements, promoted photosynthesis and biomass accumulation, thereby effectively alleviating waterlogging damage. At the flowering stage, SLs activated alanine, aspartate, and glutamate metabolism and phenylpropanoid biosynthesis pathways, regulated the GLN1 , ASP and PAL genes, increased amino acid and phenolic compounds, which together effectively mitigated the waterlogging-induced yield and quality loss. Overall, this study demonstrates that SLs can effectively mitigate waterlogging damage to the phenotypic traits, physiochemical indicators, transcriptomics, and metabolomics in rapeseed. The findings provide practical guidance for improving waterlogging tolerance in cultivation management, and also an important theoretical basis for genetic improvement in rapeseed. • Waterlogging substantially inhibited the aboveground growth and root development in seedlings. • Waterlogging reduced the photosynthesis, mesophyll and spongy tissue thickness, and element content in seedlings. • Strigolactones activated the glutathione metabolism, phenylpropanoid biosynthesis pathways in seedlings. • Strigolactones activated alanine, aspartate, and glutamate metabolism and phenylpropanoid biosynthesis at flowering.

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Claims 13

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Waterlogging inhibited aboveground growth and root development in rapeseed seedlings.

Taxon
rapeseedt0
Treatment
waterlogginge0
Outcome
aboveground growth and root developmente0
Direction
inhibitede0

Not reportedComparator

Verbatim

e0

“waterlogging substantially inhibited the aboveground growth and root development”

✓ located verbatim in the source · abstract, characters 643–723 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Waterlogging reduced net photosynthetic rate and stomatal conductance.

Taxon
rapeseedt0
Treatment
waterlogginge1
Outcome
net photosynthetic rate, stomatal conductancee0
Direction
reducede0

Not reportedComparator

Verbatim

e0

“reduced the net photosynthetic rate, stomatal conductance”

✓ located verbatim in the source · abstract, characters 736–793 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“waterlogging substantially inhibited the aboveground growth and root development”

✓ located verbatim in the source · abstract, characters 643–723 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Waterlogging reduced mesophyll and spongy tissue thickness.

Taxon
rapeseedt0
Treatment
waterlogginge1
Outcome
mesophyll and spongy tissue thicknesse0
Direction
reducede0

Not reportedComparator

Verbatim

e0

“reduced the net photosynthetic rate, stomatal conductance, mesophyll and spongy tissue thickness”

✓ located verbatim in the source · abstract, characters 736–832 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“waterlogging substantially inhibited the aboveground growth and root development”

✓ located verbatim in the source · abstract, characters 643–723 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Waterlogging reduced APX activity and N, P, and K contents.

Taxon
rapeseedt0
Treatment
waterlogginge1
Outcome
APX activity, and N, P, and K contentse0
Direction
reducede0

Not reportedComparator

Verbatim

e0

“reduced the net photosynthetic rate, stomatal conductance, mesophyll and spongy tissue thickness, APX activity, and N, P, and K contents in seedlings”

✓ located verbatim in the source · abstract, characters 736–885 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“waterlogging substantially inhibited the aboveground growth and root development”

✓ located verbatim in the source · abstract, characters 643–723 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones activated glutathione metabolism and phenylpropanoid biosynthesis in waterlogged seedlings.

Taxon
rapeseedt0
Treatment
SLse0
Outcome
glutathione metabolism and phenylpropanoid biosynthesis pathwayse0
Direction
activatede0

Not reportedComparator

Verbatim

e0

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones upregulated GPX, GSH, and 4CL genes.

Taxon
rapeseedt0
Treatment
SLse0
Outcome
GPX , GSH , and 4CL genese0
Direction
upregulatede0

Not reportedComparator

Verbatim

e0

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways, upregulated GPX , GSH , and 4CL genes”

✓ located verbatim in the source · abstract, characters 899–1020 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones increased amino acids and secondary metabolites.

Taxon
rapeseedt0
Treatment
SLse1
Outcome
amino acids and secondary metabolitese0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“increased amino acids and secondary metabolites”

✓ located verbatim in the source · abstract, characters 1022–1069 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones enhanced the antioxidant enzyme system and N, P, and K absorption efficiency.

Taxon
rapeseedt0
Treatment
SLse1
Outcome
antioxidant enzyme system and absorption efficiency of N, P, and K elementse0
Direction
enhancede0

Not reportedComparator

Verbatim

e0

“enhanced antioxidant enzyme system and absorption efficiency of N, P, and K elements”

✓ located verbatim in the source · abstract, characters 1071–1155 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones promoted photosynthesis and biomass accumulation.

Taxon
rapeseedt0
Treatment
SLse1
Outcome
photosynthesis and biomass accumulatione0
Direction
promotede0

Not reportedComparator

Verbatim

e0

“promoted photosynthesis and biomass accumulation”

✓ located verbatim in the source · abstract, characters 1157–1205 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At flowering, strigolactones activated amino acid metabolism and phenylpropanoid biosynthesis.

Taxon
rapeseedt0
Organ / stage
flowering stagee0
Treatment
SLse0
Outcome
alanine, aspartate, and glutamate metabolism and phenylpropanoid biosynthesis pathwayse0
Direction
activatede0

Not reportedComparator

Verbatim

e0

“At the flowering stage, SLs activated alanine, aspartate, and glutamate metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 1260–1384 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At flowering, strigolactones regulated GLN1, ASP, and PAL genes.

Taxon
rapeseedt0
Treatment
SLse0
Outcome
GLN1 , ASP and PAL genese0
Direction
regulatede0

Not reportedComparator

Verbatim

e0

“SLs activated alanine, aspartate, and glutamate metabolism and phenylpropanoid biosynthesis pathways, regulated the GLN1 , ASP and PAL genes”

✓ located verbatim in the source · abstract, characters 1284–1424 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At flowering, strigolactones increased amino acids and phenolic compounds.

Taxon
rapeseedt0
Treatment
SLse1
Outcome
amino acid and phenolic compoundse0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“increased amino acid and phenolic compounds”

✓ located verbatim in the source · abstract, characters 1426–1469 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Strigolactones mitigated waterlogging-induced yield and quality loss.

Taxon
rapeseedt0
Treatment
SLse1
Outcome
waterlogging-induced yield and quality losse0
Direction
mitigatede0

Not reportedComparator

Verbatim

e0

“effectively mitigated the waterlogging-induced yield and quality loss”

✓ located verbatim in the source · abstract, characters 1486–1555 · show in text ↑
t0

“rapeseed”

✓ located verbatim in the source · title, characters 133–141 · show in text ↑
e1

“SLs activated the glutathione metabolism and phenylpropanoid biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 899–981 · show in text ↑

class · quality: phytochemicals · Brassica napus (oilseed rape)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. no effect
See all 2 papers →

class · molecular: expression · Brassica napus (oilseed rape)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive
See all 4 papers →

flooding · physiology: antioxidant enzymes · Brassica napus (oilseed rape)Positive and negative results

7 papers: 1 positive, 6 negative or no effect

5 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. no effect

3 papers more in this group

See all 7 papers →

flooding · physiology: photosynthesis · Brassica napus (oilseed rape)Positive and negative results

9 papers: 1 positive, 8 negative or no effect

7 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative

5 papers more in this group

See all 9 papers →

flooding · growth · Brassica napus (oilseed rape)Positive and negative results

30 papers: 6 positive, 24 negative or no effect

23 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. negative
  3. positive

26 papers more in this group

See all 30 papers →

class · molecular: metabolites · Brassica napus (oilseed rape)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

class · physiology: photosynthesis · Brassica napus (oilseed rape)Results agree

4 papers: 4 positive, 0 negative or no effect

3 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.