Paper · 2026 · Plants

Integrative Transcriptomic and Biochemical Profiling Reveals Bacillus amyloliquefaciens JL54 Primes Larix olgensis Defenses Against Neofusicoccum laricinum Attack

Xiangyu Zhao; Fengze Yang; Lingyu Kong; et al.

9
claims
20
verbatim quotes
0
citations
4
research areas
✓
Open access · cc-by

Abstract

Larix olgensis, a keystone timber species in Northeast China, is increasingly threatened by Neofusicoccum laricinum-induced shoot blight, a devastating disease that compromises forest health and necessitates sustainable management strategies. Here, we demonstrate that the endophytic bacterium Bacillus amyloliquefaciens JL54 elicits multifaceted defense responses in L. olgensis, enhancing resistance to pathogen infection. Greenhouse assays revealed that JL54 pretreatment reduced disease incidence by 12.5% and achieved 43.75% control efficacy while maintaining host vigor. Histochemical analyses identified JL54-induced rapid hydrogen peroxide (H2O2) accumulation, extensive lignin deposition, and localized programmed cell death (PCD), indicative of a primed immune response. Transcriptomic analyses uncovered distinct temporal defense patterns: early-stage responses (0 h post-inoculation) were characterized by upregulation of cutin, suberin, and wax biosynthesis pathways, reinforcing physical barriers, whereas late-stage responses (12 h post-inoculation) were dominated by ribosome- and proteostasis-related pathways (e.g., heat shock proteins [HSPs], glutathione S-transferases [GSTs]) to mitigate cellular damage. Biochemical assays corroborated these findings, with JL54 colonization reducing membrane lipid peroxidation (27.2% decrease in malondialdehyde content) and significantly elevating the activity of key defense enzymes, including peroxidase (POD), phenylalanine ammonia-lyase (PAL), and GST. Phytohormone profiling implicated jasmonic acid (JA) as the central mediator of induced systemic resistance (ISR), with JL54-potentiated JA signaling preceding pathogen containment. Collectively, these results demonstrate that JL54 contributes to a coordinated defense strategy in L. olgensis, integrating structural reinforcement (cuticle/lignin), oxidative stress management, and JA-mediated immune priming. These insights advance the understanding of endophyte-conferred resistance in conifers and highlight JL54’s potential as a biocontrol agent for sustainable forestry.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JL54 pretreatment reduced shoot blight disease incidence in Larix by 12.5%.

Treatment
JL54 pretreatmente0
Interactor
Neofusicoccum laricinumNeofusicoccum laricinume1pathogen
Second interactor
Bacillus amyloliquefaciens JL54Bacillus amyloliquefaciense2biocontrol_agent
Outcome
disease incidencee0
Direction
reducede0
Value
12.5%e0
Setting
Greenhousee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗
Bacillus amyloliquefaciens
Bacillus amyloliquefaciens · Second interactorAgricultural Research Service (NRRL)Culture Collection · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Greenhouse assays revealed that JL54 pretreatment reduced disease incidence by 12.5% and achieved 43.75% control efficacy while maintaining host vigor”

✓ located verbatim in the source · abstract, characters 425–575 · show in text ↑
e1

“Larix olgensis, a keystone timber species in Northeast China, is increasingly threatened by Neofusicoccum laricinum-induced shoot blight”

✓ located verbatim in the source · abstract, characters 0–136 · show in text ↑
e2

“Bacillus amyloliquefaciens JL54”

✓ located verbatim in the source · abstract, characters 294–325 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JL54 pretreatment achieved 43.75% shoot blight control efficacy in Larix.

Treatment
JL54 pretreatmente0
Interactor
Neofusicoccum laricinumNeofusicoccum laricinume1pathogen
Second interactor
Bacillus amyloliquefaciens JL54Bacillus amyloliquefaciense2biocontrol_agent
Outcome
control efficacye0
Direction
achievede0
Value
43.75%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗
Bacillus amyloliquefaciens
Bacillus amyloliquefaciens · Second interactorAgricultural Research Service (NRRL)Culture Collection · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Greenhouse assays revealed that JL54 pretreatment reduced disease incidence by 12.5% and achieved 43.75% control efficacy while maintaining host vigor”

✓ located verbatim in the source · abstract, characters 425–575 · show in text ↑
e1

“Larix olgensis, a keystone timber species in Northeast China, is increasingly threatened by Neofusicoccum laricinum-induced shoot blight”

✓ located verbatim in the source · abstract, characters 0–136 · show in text ↑
e2

“Bacillus amyloliquefaciens JL54”

✓ located verbatim in the source · abstract, characters 294–325 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JL54 pretreatment maintained Larix host vigor.

Treatment
JL54 pretreatmente0
Outcome
host vigore0
Direction
maintaininge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“JL54 pretreatment reduced disease incidence by 12.5% and achieved 43.75% control efficacy while maintaining host vigor”

✓ located verbatim in the source · abstract, characters 457–575 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JL54 induced rapid H2O2 accumulation, lignin deposition and localized programmed cell death in Larix.

Treatment
JL54e0
Outcome
hydrogen peroxide (H2O2) accumulation, extensive lignin deposition, and localized programmed cell death (PCD)e0
Direction
accumulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“JL54-induced rapid hydrogen peroxide (H2O2) accumulation, extensive lignin deposition, and localized programmed cell death (PCD)”

✓ located verbatim in the source · abstract, characters 611–739 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

At 0 h post-inoculation, Larix defense showed upregulation of cutin, suberin and wax biosynthesis pathways.

Outcome
cutin, suberin, and wax biosynthesis pathwayse0
Direction
upregulatione0
Qualifier
0 h post-inoculatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“early-stage responses (0 h post-inoculation) were characterized by upregulation of cutin, suberin, and wax biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 851–979 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

At 12 h post-inoculation, Larix responses were dominated by ribosome and proteostasis related pathways.

Outcome
ribosome- and proteostasis-related pathwayse0
Direction
dominatede0
Qualifier
12 h post-inoculatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“late-stage responses (12 h post-inoculation) were dominated by ribosome- and proteostasis-related pathways (e.g., heat shock proteins [HSPs], glutathione S-transferases [GSTs])”

✓ located verbatim in the source · abstract, characters 1020–1196 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JL54 colonization reduced Larix malondialdehyde content by 27.2%.

Treatment
JL54 colonizatione0
Outcome
malondialdehyde contente0
Direction
decreasee0
Value
27.2%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“JL54 colonization reducing membrane lipid peroxidation (27.2% decrease in malondialdehyde content)”

✓ located verbatim in the source · abstract, characters 1279–1377 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

JL54 colonization significantly increased POD, PAL and GST defense enzyme activities in Larix.

Treatment
JL54 colonizatione0
Outcome
activity of key defense enzymes, including peroxidase (POD), phenylalanine ammonia-lyase (PAL), and GSTe0
Direction
elevatinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“JL54 colonization reducing membrane lipid peroxidation (27.2% decrease in malondialdehyde content) and significantly elevating the activity of key defense enzymes, including peroxidase (POD), phenylalanine ammonia-lyase (PAL), and GST”

✓ located verbatim in the source · abstract, characters 1279–1513 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Phytohormone profiling implicated JA signaling as central to JL54-induced systemic resistance and preceding pathogen containment.

Compound
jasmonic acid (JA)e0
Outcome
induced systemic resistance (ISR)e0
Qualifier
JL54-potentiated JA signaling preceding pathogen containmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Larix gmelinii var. olgensis
Larix gmelinii var. olgensis · Taxon · picture of the speciesTrevbus · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Phytohormone profiling implicated jasmonic acid (JA) as the central mediator of induced systemic resistance (ISR), with JL54-potentiated JA signaling preceding pathogen containment”

✓ located verbatim in the source · abstract, characters 1515–1695 · show in text ↑
e1

“Larix olgensis”

✓ located verbatim in the source · abstract, characters 0–14 · show in text ↑