Paper · 2026 · Journal of Experimental Botany

Variance in Calvin–Benson cycle intermediate levels between closely related species in the tomato clade

Vittoria Clapero; Stéphanie Arrivault; Mark Stitt

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claims
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verbatim quotes
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citations
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Open access · cc-by

Abstract

Published studies have reported species-variance between profiles of Calvin-Benson cycle (CBC) intermediates, not only between C4 species and C3 species, but also within C3 species (Arrivault et al., 2019, Borghi et al. 2019). It was proposed that this variance reflects lineage-dependent changes in the balance between different reactions, or poising, of the CBC. These earlier studies investigated phylogenetically-unrelated C3 species. In the current study, CBC intermediates were profiled in five closely-related species from Solanum sect. lycopersicon subsect. Lycopersicum. Levels of individual CBC intermediates showed many significant differences. In a principal component analysis, whilst three species (Solanum lycopersicum, Solanum cheesmaniae, Solanum neorickii) overlapped, Solanum pimpinellifolium and especially Solanum pennellii grouped separately, and were at opposing ends of the distribution. When combined with published data, whilst the separation between Solanum species was retained, they formed a group that was separated from five other C3 species, as well as two C4 species. It is discussed that the observed variation in CBC metabolites profiles within Solanum, together with their separation from other C₃ species, supports the idea that CBC evolution is shaped by phylogenetic relatedness and, by implication, lineage-specific adaptation.

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Claims 6

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Levels of individual Calvin-Benson cycle intermediates differed significantly among five Solanum species.

Taxon
Solanum sect. lycopersicon subsect. Lycopersicume1
Outcome
Levels of individual CBC intermediatese2

Verbatim

e1

“CBC intermediates were profiled in five closely-related species from Solanum sect. lycopersicon subsect. Lycopersicum”

✓ located verbatim in the source · abstract, characters 461–578 · show in text ↑
e2

“Levels of individual CBC intermediates showed many significant differences”

✓ located verbatim in the source · abstract, characters 580–654 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Solanum pennellii grouped separately from the other species in principal component analysis.

Taxon
Solanum pennelliiSolanum pennelliie4
Outcome
grouped separatelye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum pennellii
Solanum pennellii · Taxon(c) Matt Berger, some rights reserved (CC BY) · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e4

“Solanum pimpinellifolium and especially Solanum pennellii grouped separately, and were at opposing ends of the distribution”

✓ located verbatim in the source · abstract, characters 787–910 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Solanum pimpinellifolium grouped separately from the other species in principal component analysis.

Taxon
Solanum pimpinellifoliumSolanum pimpinellifoliume4
Outcome
grouped separatelye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum pimpinellifolium
Solanum pimpinellifolium · TaxonForrest and Kim Star · Public domain · Wikimedia Commons ↗

Verbatim

e4

“Solanum pimpinellifolium and especially Solanum pennellii grouped separately, and were at opposing ends of the distribution”

✓ located verbatim in the source · abstract, characters 787–910 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Solanum lycopersicum, Solanum cheesmaniae and Solanum neorickii overlapped in principal component analysis.

Taxon
Solanum lycopersicum, Solanum cheesmaniae, Solanum neorickiiSolanum lycopersicumSolanum neorickiiSolanum cheesmaniaee3
Outcome
overlappede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Solanum cheesmaniae
Solanum cheesmaniae · TaxonGibsonmatt · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“whilst three species (Solanum lycopersicum, Solanum cheesmaniae, Solanum neorickii) overlapped”

✓ located verbatim in the source · abstract, characters 691–785 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Solanum species formed a group separated from five other C3 species and two C4 species when published data were combined.

Taxon
SolanumSolanume5
Outcome
formed a group that was separated from five other C3 species, as well as two C4 speciese5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum
Solanum · Taxon · picture of the genus (one of its species)Forest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e5

“When combined with published data, whilst the separation between Solanum species was retained, they formed a group that was separated from five other C3 species, as well as two C4 species”

✓ located verbatim in the source · abstract, characters 912–1099 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Calvin-Benson cycle evolution is shaped by phylogenetic relatedness and lineage-specific adaptation.

Taxon
SolanumSolanume6
Outcome
CBC evolutione6
Qualifier
shaped by phylogenetic relatednesse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum
Solanum · Taxon · picture of the genus (one of its species)Forest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e6

“the observed variation in CBC metabolites profiles within Solanum, together with their separation from other C₃ species, supports the idea that CBC evolution is shaped by phylogenetic relatedness and, by implication, lineage-specific adaptation”

✓ located verbatim in the source · abstract, characters 1122–1366 · show in text ↑