Paper · 2026 · Plants

Genome-Wide Identification and Expression Profiling of the SPL Gene Family in Musa acuminata: Insights into Their Response to Drought Stress and Serendipita indica Inoculation

Muniba Shafiq; Fengjie Yang; Zilu Yang; et al.

12
claims
23
verbatim quotes
0
citations
3
research areas
✓
Open access · cc-by

Abstract

Banana productivity is severely limited by drought, yet the molecular basis of drought adaptation and endophyte-mediated stress alleviation remains poorly understood. Here, we performed a genome-wide analysis of the SQUAMOSA promoter-binding protein-like (SPL) transcription factor family in Musa acuminata and examined their transcriptional responses to drought stress and Serendipita indica inoculation. We identified 38 MaSPL genes, all encoding proteins with the conserved SBP domain and predicted nuclear localization. Phylogenetic, motif, gene structure, and collinearity analyses indicated that MaSPL genes are evolutionarily conserved, unevenly distributed across chromosomes, and expanded primarily through segmental duplication under purifying selection. Promoter analysis showed several cis-acting elements and transcription factor binding sites related to light, phytohormone, and stress signaling. Ten MaSPL genes were predicted as putative targets of miR156. qRT-PCR analysis showed that drought stress markedly downregulated the tested MaSPL genes, whereas miR156a expression increased, supporting an inverse regulatory relationship. Under drought, S. indica inoculation enhanced expression of most tested MaSPLs, restoring transcript accumulation while reducing miR156a to near-basal levels. Notable responses were observed in members of the MaSPL2, MaSPL9, and MaSPL13, respectively. S. indica improves drought tolerance by enhancing antioxidant defenses, reducing oxidative stress, and preserving photosynthetic and osmotic stability. Taken together, our results demonstrate that S. indica confers drought resilience in banana by counteracting drought-induced repression of MaSPL genes via the miR156–SPL module and by strengthening key physiological defense mechanisms.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

Thirty-eight MaSPL genes encode conserved SBP-domain proteins with predicted nuclear localization.

Taxon
Musa acuminataMusa acuminatat0
Gene
MaSPL genese0
Outcome
38 MaSPL genese0
Value
38e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We identified 38 MaSPL genes, all encoding proteins with the conserved SBP domain and predicted nuclear localization.”

✓ located verbatim in the source · abstract, characters 406–523 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MaSPL genes are evolutionarily conserved, unevenly distributed across chromosomes, and expanded mainly through segmental duplication under purifying selection.

Taxon
Musa acuminataMusa acuminatat0
Gene
MaSPL genese0
Outcome
evolutionarily conserved, unevenly distributed across chromosomes, and expanded primarily through segmental duplication under purifying selectione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“MaSPL genes are evolutionarily conserved, unevenly distributed across chromosomes, and expanded primarily through segmental duplication under purifying selection.”

✓ located verbatim in the source · abstract, characters 602–764 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MaSPL promoters have cis-acting elements and transcription factor binding sites related to light, phytohormone, and stress signaling.

Taxon
Musa acuminataMusa acuminatat0
Outcome
cis-acting elements and transcription factor binding sitese0
Qualifier
light, phytohormone, and stress signalinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Promoter analysis showed several cis-acting elements and transcription factor binding sites related to light, phytohormone, and stress signaling.”

✓ located verbatim in the source · abstract, characters 765–910 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

Ten MaSPL genes are predicted targets of miR156.

Taxon
Musa acuminataMusa acuminatat0
Gene
MaSPL genese0
Outcome
putative targets of miR156e0
Value
Tene0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Ten MaSPL genes were predicted as putative targets of miR156.”

✓ located verbatim in the source · abstract, characters 911–972 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Drought markedly downregulated tested MaSPL genes.

Taxon
Musa acuminataMusa acuminatat0
Treatment
drought stresse0
Outcome
tested MaSPL genese0
Direction
downregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“drought stress markedly downregulated the tested MaSPL genes”

✓ located verbatim in the source · abstract, characters 1002–1062 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Drought increased miR156a expression.

Taxon
Musa acuminataMusa acuminatat0
Treatment
drought stresse0
Outcome
miR156a expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“qRT-PCR analysis showed that drought stress markedly downregulated the tested MaSPL genes, whereas miR156a expression increased”

✓ located verbatim in the source · abstract, characters 973–1100 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under drought, S. indica inoculation enhanced expression of most tested MaSPLs.

Taxon
Musa acuminataMusa acuminatat0
Treatment
S. indica inoculatione0
Interactor
S. indicaSerendipita indicae0symbiont
Outcome
expression of most tested MaSPLse0
Direction
enhancede0
Qualifier
Under droughte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Under drought, S. indica inoculation enhanced expression of most tested MaSPLs, restoring transcript accumulation while reducing miR156a to near-basal levels.”

✓ located verbatim in the source · abstract, characters 1149–1307 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under drought, S. indica inoculation reduced miR156a to near-basal levels.

Taxon
Musa acuminataMusa acuminatat0
Treatment
S. indica inoculatione0
Interactor
S. indicaSerendipita indicae0symbiont
Outcome
miR156ae0
Direction
reducinge0
Qualifier
Under droughte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Under drought, S. indica inoculation enhanced expression of most tested MaSPLs, restoring transcript accumulation while reducing miR156a to near-basal levels.”

✓ located verbatim in the source · abstract, characters 1149–1307 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

S. indica improves drought tolerance by enhancing antioxidant defenses.

Taxon
Musa acuminataMusa acuminatat0
Interactor
S. indicaSerendipita indicae0symbiont
Outcome
drought tolerancee0
Qualifier
enhancing antioxidant defensese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“S. indica improves drought tolerance by enhancing antioxidant defenses, reducing oxidative stress, and preserving photosynthetic and osmotic stability.”

✓ located verbatim in the source · abstract, characters 1401–1552 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Intervention effectauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

S. indica reduces oxidative stress in drought-stressed banana.

Taxon
Musa acuminataMusa acuminatat0
Treatment
S. indicae0
Interactor
S. indicaSerendipita indicae0symbiont
Outcome
oxidative stresse0
Direction
reducinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“S. indica improves drought tolerance by enhancing antioxidant defenses, reducing oxidative stress, and preserving photosynthetic and osmotic stability.”

✓ located verbatim in the source · abstract, characters 1401–1552 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

S. indica preserves photosynthetic and osmotic stability under drought.

Taxon
Musa acuminataMusa acuminatat0
Interactor
S. indicaSerendipita indicae0symbiont
Outcome
photosynthetic and osmotic stabilitye0
Qualifier
preservinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa acuminata
Musa acuminata · TaxonJorgemach7 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“S. indica improves drought tolerance by enhancing antioxidant defenses, reducing oxidative stress, and preserving photosynthetic and osmotic stability.”

✓ located verbatim in the source · abstract, characters 1401–1552 · show in text ↑
t0

“Musa acuminata”

✓ located verbatim in the source · title, characters 78–92 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors attribute S. indica-induced drought resilience to counteraction of MaSPL repression through the miR156–SPL module.

Taxon
bananae0
Interactor
S. indicaSerendipita indicae0symbiont
Gene
MaSPL genese0
Outcome
drought resiliencee0
Qualifier
miR156–SPL modulee0

Verbatim

e0

“S. indica confers drought resilience in banana by counteracting drought-induced repression of MaSPL genes via the miR156–SPL module”

✓ located verbatim in the source · abstract, characters 1598–1729 · show in text ↑

inoculation · molecular: expression · Musa acuminata (banana)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.