Paper · 2026 · Agronomy

Improved Water Use Efficiency in Rice During Drought–Rewatering Cycles: Insights from Transcriptomics and Metabolomics

Han Qiao; Xianzhi Deng; Xin Wang; et al.

6
claims
12
verbatim quotes
0
citations
3
research areas
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Open access · cc-by

Abstract

Alternate wetting and drying (AWD) is a crucial water-saving irrigation strategy in rice production, yet its regulatory mechanisms during drought–rewatering cycles remain unclear, particularly across recovery stages. Using a polyethylene glycol (PEG-6000) hydroponic system, we analyzed physiological, metabolomic, and transcriptomic responses of Oryza sativa L. ssp. japonica under control, continuous drought, and rewatering treatments. The net photosynthetic rate (Pn) recovered within one day after rewatering, and subsequently exceeded control levels, indicating a photosynthetic compensatory effect. In contrast, instantaneous water-use efficiency (WUE) showed only a transient increase before declining thereafter and remaining lower than under continuous drought, revealing an asynchronous recovery in which carbon assimilation precedes the recovery of transpiration. Metabolomic analysis indicated a shift from drought-induced accumulation to recovery-driven metabolic reprogramming, with coordinated up-regulation of central carbon metabolism and chlorophyll biosynthesis. Decreases in citrate, malate, and glutamate suggested their sustained utilization to support nitrogen assimilation and chlorophyll synthesis. Transcriptomic data further revealed large-scale reprogramming during late recovery, including up-regulation of nitrogen assimilation genes (e.g., NIA, NiR), linking carbon–nitrogen coordination with photosynthetic compensation. Overall, these results demonstrate that stage-specific integration of physiological recovery, metabolic restructuring, and transcriptional regulation underlies AWD-induced efficiency and identify early rewatering as a critical window for optimizing WUE.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

In rice under PEG-induced drought, net photosynthetic rate recovered within one day after rewatering and subsequently exceeded control levels, indicating a photosynthetic compensatory effect.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Treatment
rewateringe1
Outcome
net photosynthetic rate (Pn)e1
Direction
exceedede1
Comparator
control levelse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“The net photosynthetic rate (Pn) recovered within one day after rewatering, and subsequently exceeded control levels”

✓ located verbatim in the source · abstract, characters 439–555 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Instantaneous water-use efficiency (WUE) of rice showed only a transient increase before declining and remaining lower than under continuous drought.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Outcome
instantaneous water-use efficiency (WUE)e1
Qualifier
transient increase before declining thereaftere1
Comparator
continuous droughte1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“instantaneous water-use efficiency (WUE) showed only a transient increase before declining thereafter and remaining lower than under continuous drought”

✓ located verbatim in the source · abstract, characters 619–770 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Metabolomic analysis of rice showed coordinated up-regulation of central carbon metabolism and chlorophyll biosynthesis during recovery.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Outcome
central carbon metabolism and chlorophyll biosynthesise1
Direction
up-regulatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“coordinated up-regulation of central carbon metabolism and chlorophyll biosynthesis”

✓ located verbatim in the source · abstract, characters 998–1081 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Citrate, malate and glutamate decreased in rice during recovery.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Outcome
citrate, malate, and glutamatee1
Direction
Decreasese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“Decreases in citrate, malate, and glutamate”

✓ located verbatim in the source · abstract, characters 1083–1126 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Transcriptomic data showed up-regulation of nitrogen assimilation genes such as NIA and NiR in rice during late recovery.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Gene
NIA, NiRe1
Outcome
nitrogen assimilation genese1
Direction
up-regulatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“up-regulation of nitrogen assimilation genes (e.g., NIA, NiR)”

✓ located verbatim in the source · abstract, characters 1320–1381 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors identify early rewatering as a critical window for optimizing water-use efficiency in rice.

Taxon
Oryza sativa L. ssp. japonicaOryza sativa Japonica Groupe0
Outcome
early rewatering as a critical window for optimizing WUEe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oryza sativa L. ssp. japonica”

✓ located verbatim in the source · abstract, characters 347–376 · show in text ↑
e1

“identify early rewatering as a critical window for optimizing WUE”

✓ located verbatim in the source · abstract, characters 1641–1706 · show in text ↑

rewatering · physiology: photosynthesis · Oryza sativa (rice)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive

4 papers more in this group

See all 8 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.