Paper · 2026 · PeerJ

A cellular view of drought adaptation in sugarcane: multi-omics integration reveals a quadruple module network linking water regulation, oxidative defense, cell wall remodeling, and cell cycle regulation

Jiahui Lu; Keyang Dai; Zhigang Li; et al.

11
claims
22
verbatim quotes
0
citations
3
research areas
✓
Open access · cc-by

Abstract

Saccharum spp., a globally important crop for sugar and bioenergy production, suffers substantial yield losses due to drought. Whole-plant studies are complicated by inherent tissue heterogeneity and organ-level interactions. To dissect this complexity, we established a homogeneous suspension cell line from the drought-tolerant cultivar ‘Roc22’. A gradient of polyethylene glycol 6000 (PEG-6000)-induced drought stress (0%, 5%, 10%, 20%) was applied, enabling integrated cytological, physiological, and transcriptomic analysis. Cytological analysis revealed a concentration-dependent decline in cell viability under drought stress, with survival rates dropping to 45.5% after 8 h of 20% PEG treatment. Cells exhibited browning, shrinkage, and ultrastructural damage (affecting the plasma membrane, mitochondria, and nucleus), with severe stress triggering programmed cell death (PCD). Physiological analysis showed that malondialdehyde (MDA) content peaked under 10% PEG treatment (17.16 μmol g −1 FW, representing a 68.55% increase over the control), soluble sugar content accumulated progressively with stress intensity (increasing by 45.64% at 20% PEG), while soluble protein content decreased significantly (a reduction of 82.9% at 20% PEG). Antioxidant enzyme activities responded differentially. Transcriptome profiling identified 9,923 differentially expressed genes (DEGs). Protein-protein interaction (PPI) network analysis pinpointed 21 core candidates, including aquaporins ( e.g. , TIP3-1 , NIP1-1 ), cell wall modifiers ( e.g., XTH23 , CESA1 ), peroxidases ( e.g. , PER25 ), and antioxidant enzymes ( e.g. , APX1 , which was strikingly up-regulated 6.22-fold).This study provides a systematic dissection of th e multi-dimensional drought response network in sugarcane at the cellular level, integrating water regulation, oxidative defense, cell wall remodeling, and cell cycleregulation. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) validation of nine candidate genes confirmed the reliability of the transcriptomic data. Our findings offer deep mechanistic insights and establish a novel “cell model + multi-omics” paradigm for crop stress biology research.

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Claims 11

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Cell viability declined with PEG stress, reaching 45.5% survival after 8 h at 20% PEG.

Taxon
sugarcanet0
Treatment
20% PEG treatmente0
Outcome
cell viabilitye0
Direction
declinee0
Value
45.5%e0
Qualifier
after 8 he0

Not reportedComparator

Verbatim

e0

“Cytological analysis revealed a concentration-dependent decline in cell viability under drought stress, with survival rates dropping to 45.5% after 8 h of 20% PEG treatment”

✓ located verbatim in the source · abstract, characters 530–702 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Stressed cells showed browning, shrinkage and ultrastructural damage.

Taxon
sugarcanet0
Outcome
browning, shrinkage, and ultrastructural damagee0

Verbatim

e0

“Cells exhibited browning, shrinkage, and ultrastructural damage (affecting the plasma membrane, mitochondria, and nucleus)”

✓ located verbatim in the source · abstract, characters 704–826 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Severe stress triggered programmed cell death.

Taxon
sugarcanet0
Treatment
severe stresse0
Outcome
programmed cell deathe0

Not reportedComparatorDirection

Verbatim

e0

“severe stress triggering programmed cell death (PCD)”

✓ located verbatim in the source · abstract, characters 833–885 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Malondialdehyde content peaked at 17.16 μmol g −1 FW under 10% PEG, 68.55% above control.

Taxon
sugarcanet0
Treatment
10% PEG treatmente0
Outcome
malondialdehyde (MDA) contente0
Direction
peakede0
Value
17.16 μmol g −1 FWe0
Qualifier
68.55% increasee0
Comparator
the controle0

Verbatim

e0

“malondialdehyde (MDA) content peaked under 10% PEG treatment (17.16 μmol g −1 FW, representing a 68.55% increase over the control)”

✓ located verbatim in the source · abstract, characters 922–1052 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Soluble sugar content rose progressively with stress intensity, by 45.64% at 20% PEG.

Taxon
sugarcanet0
Treatment
20% PEGe0
Outcome
soluble sugar contente0
Direction
increasinge0
Value
45.64%e0

Not reportedComparator

Verbatim

e0

“soluble sugar content accumulated progressively with stress intensity (increasing by 45.64% at 20% PEG)”

✓ located verbatim in the source · abstract, characters 1054–1157 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Soluble protein content fell significantly by 82.9% at 20% PEG.

Taxon
sugarcanet0
Treatment
20% PEGe0
Outcome
soluble protein contente0
Direction
decreasede0
Value
82.9%e0

Not reportedComparator

Verbatim

e0

“soluble protein content decreased significantly (a reduction of 82.9% at 20% PEG)”

✓ located verbatim in the source · abstract, characters 1165–1246 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Antioxidant enzyme activities responded differentially to stress.

Taxon
sugarcanet0
Outcome
Antioxidant enzyme activitiese0
Direction
differentiallye0

Verbatim

e0

“Antioxidant enzyme activities responded differentially”

✓ located verbatim in the source · abstract, characters 1248–1302 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptome profiling found 9,923 differentially expressed genes.

Taxon
sugarcanet0
Outcome
differentially expressed genese0
Value
9,923e0

Verbatim

e0

“Transcriptome profiling identified 9,923 differentially expressed genes (DEGs)”

✓ located verbatim in the source · abstract, characters 1304–1382 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PPI analysis identified 21 core candidate genes or proteins.

Taxon
sugarcanet0
Outcome
core candidatese0
Value
21e0

Verbatim

e0

“Protein-protein interaction (PPI) network analysis pinpointed 21 core candidates, including aquaporins ( e.g. , TIP3-1 , NIP1-1 ), cell wall modifiers ( e.g., XTH23 , CESA1 ), peroxidases ( e.g. , PER25 ), and antioxidant enzymes ( e.g. , APX1 , which was strikingly up-regulated 6.22-fold)”

✓ located verbatim in the source · abstract, characters 1384–1674 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

APX1 was up-regulated 6.22-fold.

Taxon
sugarcanet0
Gene
APX1e0
Outcome
APX1e0
Direction
up-regulatede0
Value
6.22-folde0

Verbatim

e0

“APX1 , which was strikingly up-regulated 6.22-fold”

✓ located verbatim in the source · abstract, characters 1623–1673 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

qRT-PCR validation of nine candidate genes supported the transcriptomic data.

Taxon
sugarcanet0
Outcome
reliability of the transcriptomic datae0
Value
nine candidate genese0

Verbatim

e0

“Quantitative reverse transcription polymerase chain reaction (qRT-PCR) validation of nine candidate genes confirmed the reliability of the transcriptomic data”

✓ located verbatim in the source · abstract, characters 1903–2061 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 41–50 · show in text ↑

drought · physiology: osmolytes · Saccharum officinarum (sugarcane)Positive and negative results

9 papers: 7 positive, 2 negative or no effect

1 paper in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

drought · physiology: oxidative · Saccharum officinarum (sugarcane)Positive and negative results

10 papers: 3 positive, 7 negative or no effect

6 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

drought · cytology · Saccharum officinarum (sugarcane)Results agree

4 papers: 0 positive, 4 negative or no effect

3 papers in the same direction as this paper

  1. negative
  2. negative
  3. negative
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.