Search claims · PlantClaims

Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose TaCOPT3D as a genetic engineering candidate to decrease Cd accumulation in wheat.

Taxon: wheatTriticum aestivume0
Gene: TaCOPT3De0
Outcome: decreasing Cd accumulatione0

Verbatim

e0
“TaCOPT3D is a potential candidate for decreasing Cd accumulation in wheat through genetic engineering”
✓ located verbatim in the source · abstract, characters 1208–1309

Title

The TaWRKY22–TaCOPT3D Pathway Governs Cadmium Uptake in Wheat

Xiaojuan Liu; Hongcheng Wang; Fang He; et al. International Journal of Molecular Sciences 2022. doi:10.3390/ijms231810379

Other claims from this paper (6)

Observation TaCOPT3D transcripts accumulated significantly in wheat roots under Cd stress.
Intervention effect TaCOPT3D overexpression yielded more wheat biomass than wild type under 20 mM Cd.
Intervention effect TaCOPT3D overexpression lowered Cd accumulation in wheat roots, shoots and grain versus wild type under 20 mM Cd.
Intervention effect TaCOPT3D overexpression decreased reactive oxygen species under Cd conditions.
Intervention effect TaCOPT3D overexpression increased active antioxidant enzymes under Cd conditions.
Mechanism TaWRKY22 targets the TaCOPT3D promoter in the Cd stress regulatory pathway.

Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Small-effect QTL can potentially decrease disease levels and are useful in breeding programs.

Taxon: WheatTriticum aestivumt0
Outcome: useful in breeding programse4

Verbatim

t0
“GWAS for Fusarium Head Blight Traits in a Soft Red Winter Wheat Mapping Panel”
✓ located verbatim in the source · title, characters 0–77

e4
“can potentially decrease disease levels and thus be useful in breeding programs”
✓ located verbatim in the source · abstract, characters 1538–1617

Title

GWAS for Fusarium Head Blight Traits in a Soft Red Winter Wheat Mapping Panel

Elisane W. Tessmann; Yanhong Dong; David A. Van Sanford Crop Science 2019. doi:10.2135/cropsci2018.08.0492

Other claims from this paper (5)

Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors suggest the identified QTLs, especially qSTGL8.0, can increase out-crossing rate and seed production and decrease seed cost.

Taxon: Rice, O. sativa L.Oryza sativat0
Gene: qSTGL8.0e0
Outcome: increasing out-crossing ratee0

Verbatim

t0
“Rice, O. sativa L.”
✓ located verbatim in the source · title, characters 147–165

e0
“The newly identified QTLs especially qSTGL8.0, will be quite useful for increasing out-crossing rate and this will contribute to increase seed production and decrease seed cost”
✓ located verbatim in the source · abstract, characters 1584–1760

Title

QTL Mapping of a Novel Genomic Region Associated with High Out-Crossing Rate Derived from Oryza longistaminata and Development of New CMS Lines in Rice, O. sativa L.

G. D. Prahalada; Balram Marathi; Ricky Vinarao; et al. Rice 2021. doi:10.1186/s12284-021-00521-9

Other claims from this paper (6)

Observation Fourteen QTLs from Oryza longistaminata were identified for five rice floral traits.
Association The stigma traits were positively correlated and pleiotropic to stigma length.
Observation The qSTGL8.0 interval was narrowed from about 3.9 Mb to about 2.9 Mb.
Method / resource Flanking markers were validated in segregating progeny and different genetic backgrounds.
Association PA08-03 and PA08-18 had the highest co-segregation with stigma traits.
Intervention effect qSTGL8.0 introgression increased seed setting in the two CMS backgrounds by 2.5-3.0-fold against original lines.

Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The model recommends combining QTLs reducing maximum colonization with QTLs reducing spore production per lesion or infection efficiency, or increasing latent period, to slow adaptation.

Taxon: cropst0
Gene: QTL se0
Outcome: decelerate the progressive pathogen adaptatione0

Verbatim

e0
“In order to decelerate the progressive pathogen adaptation, QTL s that decrease the pathogen's maximum capacity to colonize must be combined with QTL s that decrease the spore production per lesion or the infection efficiency or that increase the latent period”
✓ located verbatim in the source · abstract, characters 1076–1336

t0
“crops”
✓ located verbatim in the source · title, characters 69–74

Title

Sustainable deployment of QTLs conferring quantitative resistance to crops: first lessons from a stochastic model

Romain Bourget; Loïc Chaumont; Charles‐Eric Durel; et al. New Phytologist 2015. doi:10.1111/nph.13295

Other claims from this paper (2)

Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Authors propose lowering undesirable tomato flavor by targeting SlMES conversion.

Taxon: tomatoSolanum lycopersicumt0
Outcome: lower the level of a negative contributor to flavore0

Verbatim

e0
“Their ability to decrease methyl salicylate levels by conversion to salicylic acid is an attractive breeding target to lower the level of a negative contributor to flavor”
✓ located verbatim in the source · abstract, characters 1844–2014

t0
“tomato fruit”
✓ located verbatim in the source · title, characters 86–98

Title

A family of methyl esterases converts methyl salicylate to salicylic acid in ripening tomato fruit

Elizabeth M Frick; Manoj Sapkota; Lara Pereira; et al. PLANT PHYSIOLOGY 2022. doi:10.1093/plphys/kiac509

Other claims from this paper (10)

Observation A tomato methyl esterase subclade was identified as responsible for methyl salicylate demethylation.
Observation GWAS located a significant methyl salicylate locus on chromosome 2.
Observation Biparental mapping confirmed a major methyl salicylate locus on chromosome 2.
Intervention effect SlMES1 knockout fruit emitted significantly more methyl salicylate than wild type.
Intervention effect SlMES2/3/4 multiple mutants emitted more methyl salicylate than SlMES1 knockout, without a distinguishable difference.
Observation Expressed SlMES1 and SlMES3 acted on methyl salicylate in vitro.
Observation SlMES1 had higher methyl salicylate affinity than SlMES3.
Observation The SlMES locus had undergone major rearrangement.
Association SlMES1 and SlMES3 expression was highest in low methyl salicylate accessions.
Association MES genes were not appreciably expressed in high methyl salicylate lines.

Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors recommend combining Bayesian multi-trait methods with a realized relationship matrix for accurate selection indices.

Outcome: integrate the Bayesian multi-trait methods with realized relationship matrixe0

Not reportedTaxon

Verbatim

e0
“Future researches must integrate the Bayesian multi-trait methods with realized relationship matrix, aiming to build accurate selection indices models.”
✓ located verbatim in the source · abstract, characters 1054–1205

Title

Bayesian Multi-Trait Analysis Reveals a Useful Tool to Increase Oil Concentration and to Decrease Toxicity in Jatropha curcas L.

Vinícius Silva Junqueira; Leonardo de Azevedo Peixoto; Bruno Galvêas Laviola; et al. PLoS ONE 2016. doi:10.1371/journal.pone.0157038

Other claims from this paper (3)

Recommendationauthor interpretationreview summarybasis n/a

Claim · model-written summary

The authors recommend reducing ethylene production and CN− accumulation and suppressing unfavorable miRNAs in spikelets or seeds to enhance rice production.

Taxon: riceOryza sativat0
Outcome: enhance rice productione1

Verbatim

e0
“decrease ethylene production and CN − accumulation”
✓ located verbatim in the source · abstract, characters 1225–1275

e1
“downregulate/knockdown the expression of miRNAs unfavorable to grain filling in a spikelet/seed‐specific manner to enhance rice production.”
✓ located verbatim in the source · abstract, characters 1284–1423

t0
“rice”
✓ located verbatim in the source · title, characters 17–21

Title

Grain filling in rice vis‐a‐vis ethylene production in the spikelets

Birendra Prasad Shaw; Sudhanshu Sekhar; Binay Bhushan Panda; et al. Crop Science 2023. doi:10.1002/csc2.20910

Other claims from this paper (4)

Recommendationobservedoriginal resultpositivemeasured

Claim · model-written summary

The authors suggest SacBAHD01 silencing to improve suitability of sugarcane residues for cellulosic ethanol production.

Taxon: sugarcanee0
Gene: SacBAHD01e0
Outcome: improving the suitability of sugarcane residues for cellulosic ethanol productione0

Verbatim

e0
“The silencing of SacBAHD01 gene and subsequent decrease of cell-wall ferulate contents indicate a promising novel biotechnological approach for improving the suitability of sugarcane residues for cellulosic ethanol production”
✓ located verbatim in the source · abstract, characters 1244–1469

Title

Silencing of a BAHD acyltransferase in sugarcane increases biomass digestibility

Wagner Rodrigo de Souza; Thályta Fraga Pacheco; Karoline Estefani Duarte; et al. Biotechnology for Biofuels 2019. doi:10.1186/s13068-019-1450-7

Other claims from this paper (7)

Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors recommend introgressing both QTL into potato cultivars to reduce nematode density and resistance breakdown.

Taxon: potatoSolanum tuberosume0
Interactor: G. pallidaGlobodera pallidae0pathogen
Gene: GpaV(s)sple0
Outcome: introgress together GpaV(s)spl and GpaXI(s)spl into potato cultivarse0

Verbatim

e0
“introgress together GpaV(s)spl and GpaXI(s)spl into potato cultivars, in order to reduce the density of this quarantine pest in soil and to decrease the risk of selecting overcoming G. pallida subpopulations”
✓ located verbatim in the source · abstract, characters 1122–1329

Title

Resistance Quantitative Trait Loci Originating from Solanum sparsipilum Act Independently on the Sex Ratio of Globodera pallida and Together for Developing a Necrotic Reaction

Bernard Caromel; Didier Mugniéry; Marie-Claire Kerlan; et al. Molecular Plant-Microbe Interactions 2005. doi:10.1094/mpmi-18-1186

Other claims from this paper (8)

“decrease in A”

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