Search claims · PlantClaims

Associationobservedoriginal resultmeasured

Claim · model-written summary

Gene expression changes preceded corresponding enzyme activity changes.

Taxon: Artemisia vulgarisArtemisia vulgarise1
Gene: gene expressione0
Outcome: changes in their corresponding enzyme activitiese0

Not reportedDirection

Verbatim

e0
“The changes in the gene expression were always followed by changes in their corresponding enzyme activities”
✓ located verbatim in the source · abstract, characters 885–992

e1
“Artemisia vulgaris'Variegate'”
✓ located verbatim in the source · abstract, characters 144–173

Title

Studies on the mechanisms involved in resistance of closely related species of chrysanthemum to aphid

Weimin Fang Nanjing Nongye Daxue xuebao 2012

Other claims from this paper (8)

Observation Resistant Variegate had thicker palisade tissue than C. nankingense.
Observation Resistant Variegate had a higher palisade to sponge ratio than C. nankingense.
Observation Variegate had thinner spongy tissue than C. nankingense.
Observation Variegate had fewer spongy tissue layers than C. nankingense.
Intervention effect Aphid inoculation elevated POD, PPO and PAL activities.
Intervention effect Aphid inoculation elevated related gene expression.
Observation Defensive responses in Variegate rose faster and remained higher than in C. nankingense.
Association Anatomy and defensive responses correlated with aphid resistance and were proposed as seedling indicators.

Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in enzyme activity differed from corresponding gene expression changes.

Taxon: cottonGossypium hirsutumt0
Gene: pal,pod and cat gene expressione0
Outcome: changes in PAL,POD and CAT activitye0

Not reportedDirection

Verbatim

e0
“There were differences between changes in PAL,POD and CAT activity and those in pal,pod and cat gene expression.”
✓ located verbatim in the source · abstract, characters 605–717

t0
“cotton”
✓ located verbatim in the source · title, characters 77–83

Title

Changes in defensive enzyme activity and defensive enzyme gene expression in cotton leaves after feeding by Apolygus lucorum

Yang Yu Kunchong zhishi 2012

Other claims from this paper (6)

Intervention effect A. lucorum feeding increased PAL and POD activity in cotton leaves.
Intervention effect A. lucorum feeding decreased CAT activity in cotton leaves.
Intervention effect The two chemical treatments increased PAL and POD activity.
Intervention effect The two chemical treatments decreased CAT activity.
Mechanism Authors infer that A. lucorum feeding activates salicylic and jasmonate signaling pathways.
Mechanism Authors infer that PAL, POD and CAT activity is not completely regulated by corresponding genes.

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Real-time PCR validated microarray gene expression changes.

Taxon: Soybean Sproutst0
Outcome: gene expression changese0
Comparator: microarray analysise0

Verbatim

e0
“gene expression changes indicated by microarray analysis were validated by real-time PCR”
✓ located verbatim in the source · abstract, characters 1338–1426

t0
“Soybean Sprouts”
✓ located verbatim in the source · title, characters 29–44

Title

Gene Expression Profiling in Soybean Sprouts With Elevated Disease Resistance Against Pseudomonas Putida Infection

Radhika Dhakal; Muhammad Fazle Rabbee; Md Sarafat Ali; et al. Bangladesh Journal of Botany 2023. doi:10.3329/bjb.v52i1.65243

Other claims from this paper (6)

Observation The experiment identified 1539 genes with at least threefold up-regulation.
Observation The experiment identified 1301 genes with at least threefold down-regulation.
Observation DI versus DN had 1078 differentially regulated genes.
Observation RI versus RN had 651 differentially regulated genes.
Observation RI versus DI had 68 differentially regulated genes.
Observation RN versus DN had 71 differentially regulated genes.

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

4CL genes showed significant expression changes.

Taxon: cabbageBrassica oleracea var. capitatae1
Gene: 4CL genese0
Outcome: expression changese0

Verbatim

e0
“significant expression changes of 4CL genes”
✓ located verbatim in the source · abstract, characters 672–715

e1
“cabbage (Brassica oleracea var. capitata)”
✓ located verbatim in the source · abstract, characters 309–350

Title

Multi-Time Point Transcriptome Analysis and Functional Validation Revealed Bol4CL41 Negatively Regulates Black Rot Resistance in Cabbage

Hongxue Ma; Siping Deng; Congcong Kong; et al. International Journal of Molecular Sciences 2025. doi:10.3390/ijms26136179

Other claims from this paper (7)

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AC2 expression induced clear leaf and flower phenotypic changes in tobacco.

Taxon: tobaccoNicotiana tabacume0
Organ / stage: leavese0
Treatment: Expression of AC2 RSSe0
Gene: AC2 RSSe0
Outcome: clear phenotypic changese0

Not reportedComparatorDirection

Verbatim

e0
“Expression of AC2 RSS in transgenic tobacco plants induced clear phenotypic changes both in leaves and in flowers.”
✓ located verbatim in the source · abstract, characters 760–874

Title

Expression of geminiviral AC2 RNA silencing suppressor changes sugar and jasmonate responsive gene expression in transgenic tobacco plants

Arto J Soitamo; Balaji Jada; Kirsi Lehto BMC Plant Biology 2012. doi:10.1186/1471-2229-12-204

Other claims from this paper (11)

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MSBP1 expression changes affected arbuscular morphology.

Taxon: tobaccoNicotiana tabacume1
Treatment: changes in MSBP1 expressione0
Gene: MSBP1e0
Outcome: arbuscular morphologye0

Not reportedComparatorDirection

Verbatim

e0
“arbuscular morphology is affected by changes in MSBP1 expression”
✓ located verbatim in the source · abstract, characters 1553–1617

e1
“transgenic tobacco plants with increased and decreased MSBP1 expression levels”
✓ located verbatim in the source · abstract, characters 605–683

Title

Brassinosteroids Affect the Symbiosis Between the AM Fungus Rhizoglomus irregularis and Solanaceous Host Plants

Lea von Sivers; Hannah Jaspar; Bettina Johst; et al. Frontiers in Plant Science 2019. doi:10.3389/fpls.2019.00571

Other claims from this paper (10)

Mechanism Changing MSBP1 expression produced a tobacco phenotype consistent with inhibition of brassinosteroid signaling.
Intervention effect Brassinazole treatment mimicked MSBP1 overexpression.
Intervention effect Manipulating MSBP1 expression affected tobacco growth and development.
Intervention effect Manipulating MSBP1 expression affected host plant responses to AM fungi.
Intervention effect Manipulating MSBP1 expression affected arbuscular architecture.
Intervention effect Brassinosteroids directly affected nutrient exchange in AM symbiosis.
Intervention effect Brassinosteroids directly affected biomass production of colonized host plants.
Intervention effect Brassinolide treatment affected arbuscular morphology.
Intervention effect Brassinazole treatment affected arbuscular morphology.
Mechanism The authors conclude that brassinosteroids control host growth responses and nutrient exchange in AM symbiosis, potentially impeded by MSBP1.

Associationobservedoriginal resultmeasured

Claim · model-written summary

Phenotypic changes corresponded to expression changes in related functional genes.

Taxon: Theobroma cacaoTheobroma cacaoe1
Interactor: Colletotrichum tropicaleColletotrichum tropicalee1symbiont
Gene: specific functional genese0
Outcome: phenotypic changese0

Not reportedDirection

Verbatim

e0
“These phenotypic changes observed in E+ plants correspond to changes in expression of specific functional genes in related pathways”
✓ located verbatim in the source · abstract, characters 1255–1386

e1
“Theobroma cacao leaves with Colletotrichum tropicale (E+)”
✓ located verbatim in the source · abstract, characters 860–917

Title

Pervasive effects of a dominant foliar endophytic fungus on host genetic and phenotypic expression in a tropical tree

Luis C. Mejía; Edward A. Herre; Jed P. Sparks; et al. Frontiers in Microbiology 2014. doi:10.3389/fmicb.2014.00479

Other claims from this paper (6)

Intervention effect Endophyte inoculation changed expression of hundreds of cacao genes, including defensive genes.
Intervention effect Endophyte positive cacao plants had increased lignin and cellulose content.
Intervention effect Endophyte positive cacao plants had reduced maximum photosynthesis.
Intervention effect Endophyte positive cacao plants were enriched in nitrogen-15 and carbon-13 isotopes.
Mechanism Cacao gene Tc00g04254 conferred resistance to pathogen damage without endophytes or their products.
Mechanism Authors attribute increased pathogen resistance partly to intrinsic defense upregulation.

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Hormone changes were interpreted as driving signaling expression changes that aided ZYM1288 under infection.

Taxon: hulless barleyt0
Material: ZYM1288e0
Interactor: Bghe0pathogen
Outcome: downstream expression changes in plant-hormone signalinge0
Qualifier: Changes in hormone levelse0

Verbatim

e0
“Changes in hormone levels drove downstream expression changes in plant-hormone signaling that helped ZYM1288 to perform better under Bgh infection.”
✓ located verbatim in the source · abstract, characters 1101–1248

t0
“Hulless Barley Leaf”
✓ located verbatim in the source · title, characters 45–64

Title

Phytohormonal and Transcriptomic Response of Hulless Barley Leaf in Response to Powdery Mildew Infection

Zha Sang; Minjuan Zhang; Wang Mu; et al. Agronomy 2021. doi:10.3390/agronomy11061248

Other claims from this paper (8)

Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

PR1 expression showed no significant changes.

Taxon: tomatoesSolanum lycopersicumt0
Gene: PR1e0
Outcome: PR1 expression levelse0
Direction: no significant changese0

Verbatim

e0
“PR1 expression levels showed no significant changes”
✓ located verbatim in the source · abstract, characters 1206–1257

t0
“tomatoes”
✓ located verbatim in the source · title, characters 170–178

Title

Nesidiocoris tenuis, Macrolophus pygmaeus (Hemiptera: Miridae) and (Z)-3-hexenyl propanoate induce systemic resistance against the root-knot nematode Meloidogyne spp. in tomatoes

Aïda Magdalena Fullana; Ariadna Giné; Alberto Urbaneja; et al. BioControl 2025. doi:10.1007/s10526-025-10305-5

Other claims from this paper (7)

Intervention effect Exposure to N. tenuis reduced nematode infectivity and reproduction.
Intervention effect Exposure to (Z) -3-hexenyl propanoate reduced nematode infectivity and reproduction.
Intervention effect N. tenuis upregulated leaf PIN2 expression nine-fold at zero days after nematode inoculation.
Intervention effect M. pygmaeus upregulated leaf PIN2 expression 14-fold at zero days after nematode inoculation.
Intervention effect Nematode inoculation repressed PIN2 expression seven days later by nine-fold.
Intervention effect Mirid exposure prevented the seven-day repression of PIN2 expression by nematodes.
Recommendation The authors propose mirids and the volatile as a promising nematode management strategy.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Expression changes before broad bean necrosis were confirmed in 20 genes.

Taxon: broad beanVicia fabat0
Outcome: Expression changese0
Value: 20 genese0

Verbatim

e0
“Expression changes were confirmed in 20 genes”
✓ located verbatim in the source · abstract, characters 442–487

t0
“broad bean”
✓ located verbatim in the source · title, characters 60–70

Title

Screening and analysis of genes expressed upon infection of broad bean with Clover yellow vein virus causing lethal necrosis

Kenji S Nakahara; Hiroaki Kitazawa; Go Atsumi; et al. Virology Journal 2011. doi:10.1186/1743-422x-8-355

Other claims from this paper (6)

“expression changes”

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