By interacting organism › Bacteria › Thermomonosporaceae

Observationobservedoriginal resultmeasured

Claim · model-written summary

The susceptible date palm cultivar was more enriched in Actinomadura.

Taxon: date palmPhoenix dactyliferat0
Interactor: ActinomaduraActinomadurae0other
Outcome: enrichmente0
Direction: highere0

Verbatim

e0
“the susceptible cultivar exhibited a higher enrichment of several beneficial genera, such as Pseudomonas , Lysinibacillus , Actinomadura , Halomonas , Kocuria , Serratia , Phyllobacterium , Bacillus , Streptomyces , and Trichoderma .”
✓ located verbatim in the source · abstract, characters 1374–1607

t0
“date palm”
✓ located verbatim in the source · title, characters 118–127

Title

Comparative metagenomic analysis of bacterial and fungal communities associated with bayoud-resistant and susceptible date palm cultivars in the Zagora oasis-Morocco

Aliou Moussa Diouf; Abdou Lahat Mbaye; Maimouna Deh; et al. BMC Microbiology 2026. doi:10.1186/s12866-026-04837-8

Other claims from this paper (14)

Associationobservedoriginal resultmeasured

Claim · model-written summary

T3 amino acid and nucleotide secretion correlated with Edaphobacter and Actinomadura abundance.

Material: T3e0
Interactor: EdaphobacterEdaphobactere0other
Second interactor: ActinomaduraActinomadurae0other
Outcome: abundance of Edaphobacter and Actinomadurae0

Not reportedTaxonDirection

Verbatim

e0
“T3 secreted high levels of amino acids and nucleotides with metabolic and defensive roles, correlating with the abundance of Edaphobacter and Actinomadura”
✓ located verbatim in the source · abstract, characters 1307–1461

t0
“watermelon”
✓ located verbatim in the source · title, characters 129–139

Title

Rootstock-specific bacterial microbiome and metabolome remodeling enhances glycine substitution efficacy for ammonium nitrate in watermelon

Zehao Chen; Tian Yao; Xingxing Bao; et al. Frontiers in Plant Science 2025. doi:10.3389/fpls.2025.1640174

Other claims from this paper (13)

Intervention effect Glycine raised bacterial alpha diversity to some extent relative to ammonium nitrate, without a significant difference.
Intervention effect Glycine altered bacterial beta diversity relative to ammonium nitrate.
Intervention effect Glycine enhanced microbial network complexity.
Association Rootstock genotype was the main driver of bacterial alpha diversity.
Association Rootstock genotype shaped bacterial network architecture.
Observation T1 rootstocks supported bacterial networks with strong associations enriched in two-component systems.
Observation T3 rootstock networks showed intensified resource competition.
Association Rootstock identity influenced root exudate profiles.
Observation T3 secreted high levels of amino acids and nucleotides.
Association T1 lipid secretion increased Acidibacter abundance.
Mechanism Rootstock, bacterial and metabolite interplay modulated soil enzyme activities.
Mechanism Rootstock, bacterial and metabolite interplay supported photochemical efficiency.
Mechanism Rootstock, bacterial and metabolite interplay promoted biomass accumulation.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SAAS-63 inoculation increased the relative abundances of Streptomyces, Actinoallomurus and Verrucomicrobia in the lettuce rhizosphere.

Taxon: lettuceLactuca sativat1
Treatment: Inoculation with B. velezensis SAAS-63e3
Interactor: Streptomyces, Actinoallomurus, VerrucomicrobiaStreptomyces Verrucomicrobiota Actinoallomuruse3symbiont
Outcome: relative abundances of Streptomyces, Actinoallomurus, Verrucomicrobiae3
Direction: increasede3

Not reportedComparator

Verbatim

t1
“the effect of Bacillus velezensis SAAS-63 on resisting nutrient stress in lettuce”
✓ located verbatim in the source · title, characters 29–110

e3
“Inoculation with B. velezensis SAAS-63 altered the microbial community of the rhizosphere and increased the relative abundances of Streptomyces, Actinoallomurus, Verrucomicrobia, and Chloroflexi”
✓ located verbatim in the source · abstract, characters 830–1024

Title

Using multi-omics to explore the effect of Bacillus velezensis SAAS-63 on resisting nutrient stress in lettuce

Yinshuang Bai; Ke Song; Mengxiang Gao; et al. Applied Microbiology and Biotechnology 2024. doi:10.1007/s00253-024-13153-y

Other claims from this paper (8)

Associationobservedoriginal resultmeasured

Claim · model-written summary

Z plants had higher relative abundance of Actinomadura, Nocardia and Pseudonocardia.

Taxon: Z-plantse0
Interactor: ActinomaduraActinomadurae0symbiont
Outcome: relative abundance of the representatives of genera Actinomadura, Nocardia and Pseudonocardiae0
Direction: highere0

Not reportedComparator

Verbatim

e0
“the Z-plants had a higher relative abundance of the representatives of genera Actinomadura, Nocardia and Pseudonocardia”
✓ located verbatim in the source · abstract, characters 900–1019

e1
“Unidentified representatives of the family Rhizobiaceae were present in some of R and Z plants, being most abundant in soil samples”
✓ located verbatim in the source · abstract, characters 1021–1152

Title

Root microbiomes of Zygophyllaceae in the Kazakhstan desert: a weak evidence for rhizobial nitrogen fixation

Vladimir G. Onipchenko; Alexandra A. Klyukina; Ilya V. Kublanov; et al. Botanica Pacifica 2024. doi:10.17581/bp.2024.13212

Other claims from this paper (8)

Observation One Zygophyllum fabago root sample had a nodule.
Observation The nodulated sample microbiome resembled nonnodulated root samples.
Association R plants had higher relative abundance of Glycomyces, Massilia and Streptomyces.
Observation Rhizobiaceae occurred in some R and Z plants.
Observation Rhizobiaceae were most abundant in soil samples.
Association Z and R plants had similar average δ13С.
Association Z and R plants had similar average δ15N.
Observation The studied Zygophyllaceae do not show effective atmospheric nitrogen fixation due to rhizobial symbiosis.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

B. subtilis K424 reduced relative abundance of Actinomadura.

Taxon: CucumberCucumis sativust0
Treatment: B. subtilis K424e0
Interactor: ActinomaduraActinomadurae0other
Second interactor: B. subtilis K424Bacillus subtilise0symbiont
Outcome: relative abundance of Actinomadurae0
Direction: reducede0

Not reportedComparator

Verbatim

e0
“B. subtilis K424 reduced the relative abundance of Actinomadura and promoted that of the Rhodanobacter, Bacillus, Pseudomonas, Devosiaceae, and Blastobotrys genera”
✓ located verbatim in the source · abstract, characters 1020–1183

t0
“Cucumber”
✓ located verbatim in the source · title, characters 27–35

Title

Bacillus subtilis Promotes Cucumber Growth and Quality under Higher Nutrient Solution by Altering the Rhizospheric Microbial Community

Bin Li; Lixiang Zhao; Dongxu Liu; et al. Plants 2023. doi:10.3390/plants12020298

Other claims from this paper (17)

Intervention effect Higher nutrient solution improved cucumber fruit flavor quality.
Intervention effect Higher nutrient solution increased cucumber fruit (E,Z)-2,6-nonadienal content.
Intervention effect Higher nutrient solution increased cucumber fruit (E)-2-Nonenal content.
Intervention effect B. subtilis K424 improved growth performance in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 improved photosynthetic capacity in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 improved vitamin C content in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 improved soluble sugars in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 improved soluble protein in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 improved total pectin in cucumber under higher nutrition solution conditions.
Intervention effect B. subtilis K424 increased rhizospheric bacterial diversity relative to higher solution alone.
Intervention effect B. subtilis K424 did not significantly change fungal presence relative to higher solution alone.
Intervention effect B. subtilis K424 promoted relative abundance of Rhodanobacter.
Intervention effect B. subtilis K424 promoted relative abundance of Bacillus.
Intervention effect B. subtilis K424 promoted relative abundance of Pseudomonas.
Intervention effect B. subtilis K424 promoted relative abundance of Devosiaceae.
Intervention effect B. subtilis K424 promoted relative abundance of Blastobotrys.
Association Bacillus, Rhodanobacter, and Blastobotrys were positively correlated with substrate sucrase, catalase, and urease.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Ten characteristic microorganisms were associated with continuously planted Casuarina trees.

Taxon: C. equisetifoliaCasuarina equisetifoliae0
Interactor: ActinoallomurusActinoallomuruse0symbiont
Outcome: key characteristic microorganismse0
Value: 10e0

Verbatim

e0
“10 key characteristic microorganisms, mainly Actinoallomurus , Actinomadura , and Mycobacterium , were responsible for continuously planted C. equisetifolia trees.”
✓ located verbatim in the source · abstract, characters 659–822

Title

Metagenomics-based exploration of key soil microorganisms contributing to continuously planted Casuarina equisetifolia growth inhibition and their interactions with soil nutrient transformation

Yuhua Wang; Shaoxiong Lin; Jianjuan Li; et al. Frontiers in Plant Science 2023. doi:10.3389/fpls.2023.1324184

Other claims from this paper (13)

Intervention effect Continuous planting caused Casuarina dwarfing.
Intervention effect Continuous planting shortened Casuarina roots.
Intervention effect Continuous planting reduced the Casuarina seedling root system.
Association Actinoallomurus numbers decreased significantly with more continuous planting.
Mechanism Continuous planting weakened microbial signal transduction and Casuarina stress defense.
Mechanism Reduced microbial metabolism and replication were linked to reduced microbial propagation and quantity.
Observation Several microbial metabolic pathways were significantly reduced.
Mechanism Soil capacity to synthesize and metabolize carbon and nitrogen decreased.
Mechanism Reduced microbial capacity lowered soil microbes, microbial carbon and nitrogen, and respiration.
Mechanism Reduced microbial capacity lowered soil enzyme nutrient cycling and resistance activities.
Observation Rhizosphere available nutrients were significantly reduced.
Observation Rhizosphere ion exchange capacity fell.
Mechanism Soil changes impeded Casuarina growth.

Associationobservedoriginal resultmeasured

Claim · model-written summary

Actinomadura abundance was associated with the root metabolite profile.

Taxon: Tetrastigma hemsleyanumTetrastigma hemsleyanumt0
Interactor: ActinomaduraActinomadurae0other
Outcome: metabolites profile of SYQ rootse0

Not reportedDirection

Verbatim

e0
“The high abundance of Actinomadura , Streptomyces and other bacteria was found to be associated with the metabolites profile of SYQ roots.”
✓ located verbatim in the source · abstract, characters 679–817

t0
“Tetrastigma hemsleyanum”
✓ located verbatim in the source · title, characters 90–113

Title

Role of plant metabolites in the formation of bacterial communities in the rhizosphere of Tetrastigma hemsleyanum

Yuqing Huang; Hongliang Hu; Erkui Yue; et al. Frontiers in Microbiology 2023. doi:10.3389/fmicb.2023.1292896

Other claims from this paper (4)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Actinomadura cremea had one exophytic isolate.

Taxon: PapayaCarica papayat0
Interactor: Actinomadura cremeaActinomadura cremeae0other
Outcome: isolatee0
Value: one isolatee0

Verbatim

e0
“Actinomadura cremea, Streptomeces sp., and Micromonospora sp.) each had one isolate”
✓ located verbatim in the source · abstract, characters 485–568

t0
“Papaya”
✓ located verbatim in the source · title, characters 11–17

Title

Control of Papaya Rot Disease by Using Exophytic and Endophytic Fungi Which is Environmentally Friendly

I Made Sudarma Ni Nengah Darmiati; dan Ni Wayan Suniti International Journal of Current Microbiology and Applied Sciences 2021. doi:10.20546/ijcmas.2021.1009.069

Other claims from this paper (18)

Observation Microscopic identification attributed papaya fruit rot to Lasiodiplodia theobromae.
Observation Rhizopus sp. was the most frequent exophytic fungus, with 69 isolates.
Observation Aspergillus niger had six exophytic isolates.
Observation Actinomyces israelii had six exophytic isolates.
Observation Streptomeces sp. had one exophytic isolate.
Observation Micromonospora sp. had one exophytic isolate.
Observation Rhizopus sp. had 30 endophytic isolates.
Observation A. niger had 18 endophytic isolates.
Observation Agromyces ramosus had three endophytic isolates.
Observation Trichoderma sp had three endophytic isolates.
Observation Exophytic microbes had diversity index 2.45.
Observation Exophytic microbes had dominance index 0.4078.
Observation Endophytic microbes had diversity index 1.876.
Observation Endophytic microbes had dominance index 0.58.
Observation Nearly all exophytic and endophytic microbes competitively inhibited the rot pathogen in vitro.
Observation Trichoderma sp. produced an inhibition zone and showed antibiotic and competitive activity.
Observation Most Actinomycetes did not inhibit L.theobromae.
Intervention effect Treatment E using Trichoderma sp. had the highest in vivo inhibitory power.

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Co-inoculation of cowpea with Bradyrhizobium and Actinomadura lowered hydrogen peroxide content in nodules under salt stress.

Taxon: cowpeaVigna unguiculatat0
Treatment: co-inoculated with Bradyrhizobium and Actinomadurae1
Interactor: ActinomaduraActinomadurae1symbiont
Second interactor: BradyrhizobiumBradyrhizobiume1symbiont
Outcome: hydrogen peroxide contente1
Direction: lowere1

Verbatim

t0
“Antioxidant response of cowpea co-inoculated with plant growth-promoting bacteria under salt stress”
✓ located verbatim in the source · title, characters 0–99

e1
“plants co-inoculated with Bradyrhizobium and Actinomadura or co-inoculated with Bradyrhizobium and Paenibacillus graminis showed lower hydrogen peroxide content in their nodules”
✓ located verbatim in the source · abstract, characters 1144–1321

Title

Antioxidant response of cowpea co-inoculated with plant growth-promoting bacteria under salt stress

Alexandra de Andrade Santos; Joaquim Albenísio Gomes da Silveira; Aurenivia Bonifacio; et al. Brazilian Journal of Microbiology 2018. doi:10.1016/j.bjm.2017.12.003

Other claims from this paper (7)

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Potentially beneficial microorganisms increased in relative proportion on spider plants after biostimulant treatment.

Taxon: spider plantse0
Interactor: Brevibacillus, Actinoallomurus, Paenibacillus, SphaerisporangiumPaenibacillusBrevibacillusSphaerisporangiumActinoallomuruse4other
Outcome: proportion of potentially beneficial microorganismse4
Direction: increasede4

Verbatim

e0
“Here, we investigated shifts of the microbiome on leaves of spider plants (Chlorophytum comosum) and its surrounding abiotic surfaces in the built environment after irrigation with a vermicompost-based biostimulant for 12 weeks”
✓ located verbatim in the source · abstract, characters 295–522

e4
“The proportion of potentially beneficial microorganisms like Brevibacillus, Actinoallomurus, Paenibacillus, Sphaerisporangium increased relatively”
✓ located verbatim in the source · abstract, characters 987–1133

Title

Enriching Beneficial Microbial Diversity of Indoor Plants and Their Surrounding Built Environment With Biostimulants

Alexander Mahnert; Marika Haratani; Maria Schmuck; et al. Frontiers in Microbiology 2018. doi:10.3389/fmicb.2018.02985

Other claims from this paper (9)

Intervention effect The vermicompost-based biostimulant promoted growth of spider plants.
Intervention effect The biostimulant changed the composition of the leaf microbiome and abundance of intact microbial cells on spider plant leaves.
Intervention effect The biostimulant changed the microbiome on abiotic surfaces near spider plants even more strongly than on leaves.
Intervention effect Biostimulant treatment stabilized microbial diversity on spider plants.
Intervention effect Biostimulant treatment increased the relative abundance of Bacteroidetes on spider plants.
Observation Verrucomicrobia, Acidobacteria and Thaumarchaeota transiently emerged as new phyla on spider plants after biostimulant treatment.
Association The built environment became more plant-like after biostimulant treatment.
Mechanism Indole-3-acetic acid in the biostimulant was potentially contributed by Pseudomonas species.
Method / resource Effects of the biostimulant on microbiome composition on spider plants could be predicted with 87% accuracy.

Thermomonosporaceae 10 claims

10 claims