By organism › Fungi › Tilletiaceae

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The T. horrida genome sequence is 23.2 Mb.

Taxon: T. horridaTilletia horridae0
Outcome: genome sequencee0
Value: 23.2 Mbe0

Verbatim

e0
“genome sequence of T. horrida; it is composed of 23.2 Mb that encode 7,729 predicted genes and 6,973 genes supported by RNA-seq”
✓ located verbatim in the source · abstract, characters 239–366

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The T. horrida genome encodes 7,729 predicted genes.

Taxon: T. horridaTilletia horridae0
Outcome: predicted genese0
Value: 7,729e0

Verbatim

e0
“genome sequence of T. horrida; it is composed of 23.2 Mb that encode 7,729 predicted genes and 6,973 genes supported by RNA-seq”
✓ located verbatim in the source · abstract, characters 239–366

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Of the predicted genes, 6,973 are supported by RNA-seq.

Taxon: T. horridaTilletia horridae0
Outcome: genes supported by RNA-seqe0
Value: 6,973e0

Verbatim

e0
“genome sequence of T. horrida; it is composed of 23.2 Mb that encode 7,729 predicted genes and 6,973 genes supported by RNA-seq”
✓ located verbatim in the source · abstract, characters 239–366

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Repetitive elements account for 8.45% of the T. horrida genome.

Taxon: Tilletia horridaTilletia horridat0
Outcome: repetitive elementse0
Value: 8.45%e0

Verbatim

e0
“The genome contains few repetitive elements that account for 8.45% of the total”
✓ located verbatim in the source · abstract, characters 368–447

t0
“Tilletia horrida”
✓ located verbatim in the source · title, characters 29–45

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation T. horrida lies evolutionarily close to the Ustilago fungi.
Observation No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.
Observation T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.
Observation Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.
Observation The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultmeasured

Claim · model-written summary

T. horrida lies evolutionarily close to the Ustilago fungi.

Taxon: T. horridaTilletia horridae0
Outcome: lies close to the Ustilago fungie0

Verbatim

e0
“Evolutionarily, T. horrida lies close to the Ustilago fungi”
✓ located verbatim in the source · abstract, characters 449–508

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation Repetitive elements account for 8.45% of the T. horrida genome.
Observation No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.
Observation T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.
Observation Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.
Observation The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.

Taxon: T. horridaTilletia horridae0
Outcome: co-linearity was not observede0
Comparator: barley smut Ustilago hordeie0

Verbatim

e0
“co-linearity was not observed between T. horrida and the barley smut Ustilago hordei”
✓ located verbatim in the source · abstract, characters 559–643

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation Repetitive elements account for 8.45% of the T. horrida genome.
Observation T. horrida lies evolutionarily close to the Ustilago fungi.
Observation T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.
Observation Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.
Observation The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultmeasured

Claim · model-written summary

T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.

Taxon: T. horridaTilletia horridae0
Outcome: carbohydrate-active enzymes and secondary metabolitese0
Direction: smallere0

Verbatim

e0
“T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites”
✓ located verbatim in the source · abstract, characters 706–797

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation Repetitive elements account for 8.45% of the T. horrida genome.
Observation T. horrida lies evolutionarily close to the Ustilago fungi.
Observation No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.
Observation Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.
Observation The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.

Taxon: Tilletia horridaTilletia horridat0
Organ / stage: early infectione0
Interactor: Tilletia horridaTilletia horridat0pathogen
Outcome: highly expressede0

Verbatim

e0
“Genes that encode secreted proteins and enzymes of secondary metabolism, and genes that are represented in the pathogen-host interaction gene database genes, are highly expressed during early infection”
✓ located verbatim in the source · abstract, characters 894–1095

t0
“Tilletia horrida”
✓ located verbatim in the source · title, characters 29–45

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation Repetitive elements account for 8.45% of the T. horrida genome.
Observation T. horrida lies evolutionarily close to the Ustilago fungi.
Observation No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.
Observation T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.
Observation The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The authors identified 131 candidate pathogen effectors based on expression patterns and functionality.

Taxon: Tilletia horridaTilletia horridat0
Interactor: Tilletia horridaTilletia horridat0pathogen
Outcome: candidate pathogen effectorse0
Value: 131e0

Verbatim

e0
“131 candidate pathogen effectors identified according to their expression patterns and functionality”
✓ located verbatim in the source · abstract, characters 1184–1284

t0
“Tilletia horrida”
✓ located verbatim in the source · title, characters 29–45

Title

The pathogenic mechanisms of Tilletia horrida as revealed by comparative and functional genomics

Aijun Wang; Linxiu Pang; Na Wang; et al. Scientific Reports 2018. doi:10.1038/s41598-018-33752-w

Other claims from this paper (9)

Method / resource The T. horrida genome sequence is 23.2 Mb.
Method / resource The T. horrida genome encodes 7,729 predicted genes.
Method / resource Of the predicted genes, 6,973 are supported by RNA-seq.
Observation Repetitive elements account for 8.45% of the T. horrida genome.
Observation T. horrida lies evolutionarily close to the Ustilago fungi.
Observation No co-linearity was observed between T. horrida and the barley smut Ustilago hordei.
Observation T. horrida possesses a smaller set of carbohydrate-active enzymes and secondary metabolites.
Observation Genes encoding secreted proteins and secondary metabolism enzymes, and PHI-database genes, are highly expressed during early infection.
Observation Two of the candidate effectors were validated as triggering leaf cell death in Nicotiana benthamiana.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Fifteen pathogenic races were identified, including the listed T. laevis races.

Taxon: T. laevisTilletia laevise0
Outcome: pathogenic racese0
Value: Fifteene0
Qualifier: L-19, L-21, and L-1e0

Verbatim

e0
“Fifteen different pathogenic races were identified in this study; L-19, L-21, and L-1 (for T. laevis) T-11, T-1, T-2 and T-31 (for T. caries).”
✓ located verbatim in the source · abstract, characters 586–728

Title

New races of Tilletia laevis and T. caries, the causal agents of wheat common bunt in Khuzestan province, Iran1

Nahid Albughobeish; S. Ali Moosawi Jorf DOAJ (DOAJ: Directory of Open Access Journals) 2015

Other claims from this paper (6)

Tilletiaceae 24 claims

24 claims