By organism › Green plants › Typhaceae › Sparganium stoloniferum

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.

Taxon: Sparganium stoloniferumSparganium stoloniferume0
Outcome: high-quality chromosome-level genomee0

Not reportedValue

Verbatim

e0
“assembled a high-quality chromosome-level genome of a widespread emergent aquatic plant Sparganium stoloniferum”
✓ located verbatim in the source · abstract, characters 312–423

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Population genomic analysis identified three geographic genetic lineages.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Outcome: three genetic lineagese0
Value: threee0
Setting: northeast (NE), southwest (SW) and northwest (NW)e0

Verbatim

e0
“Population genomic analyses revealed three genetic lineages reflecting the northeast (NE), southwest (SW) and northwest (NW) of its geographical distribution.”
✓ located verbatim in the source · abstract, characters 615–773

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Method / resource A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.
Observation The NE lineage diverged in the middle Pleistocene.
Observation The SW and NW lineages diverged about 2400 years ago.
Observation Nine populations were identified as monoclonal.
Observation Vegetative propagule dispersal was identified among five populations spanning three basins in the NE lineage.
Observation Vegetative propagules dispersed up to 1041 km.
Observation Lineage-specific positively selected genes were identified as potentially involved in adaptation to saline wetlands and high altitude.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The NE lineage diverged in the middle Pleistocene.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Material: NE lineagee0
Outcome: diverged in the middle Pleistocenee0

Verbatim

e0
“The NE lineage diverged in the middle Pleistocene”
✓ located verbatim in the source · abstract, characters 774–823

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Method / resource A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.
Observation Population genomic analysis identified three geographic genetic lineages.
Observation The SW and NW lineages diverged about 2400 years ago.
Observation Nine populations were identified as monoclonal.
Observation Vegetative propagule dispersal was identified among five populations spanning three basins in the NE lineage.
Observation Vegetative propagules dispersed up to 1041 km.
Observation Lineage-specific positively selected genes were identified as potentially involved in adaptation to saline wetlands and high altitude.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The SW and NW lineages diverged about 2400 years ago.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Material: SW and NW lineagese0
Outcome: divergede0
Value: about 2400 years agoe0

Verbatim

e0
“the SW and NW lineages diverged until about 2400 years ago”
✓ located verbatim in the source · abstract, characters 830–888

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Method / resource A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.
Observation Population genomic analysis identified three geographic genetic lineages.
Observation The NE lineage diverged in the middle Pleistocene.
Observation Nine populations were identified as monoclonal.
Observation Vegetative propagule dispersal was identified among five populations spanning three basins in the NE lineage.
Observation Vegetative propagules dispersed up to 1041 km.
Observation Lineage-specific positively selected genes were identified as potentially involved in adaptation to saline wetlands and high altitude.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Nine populations were identified as monoclonal.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Outcome: monoclonal populatione0
Value: nine populationse0

Verbatim

e0
“Clonal relationship analyses identified nine populations as monoclonal population.”
✓ located verbatim in the source · abstract, characters 890–972

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Vegetative propagule dispersal was identified among five populations spanning three basins in the NE lineage.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Material: NE lineagee0
Outcome: Dispersal of vegetative propagulese0
Value: five populationse0
Setting: three basinse0

Verbatim

e0
“Dispersal of vegetative propagules was identified between five populations covering three basins in the NE lineage”
✓ located verbatim in the source · abstract, characters 973–1087

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Method / resource A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.
Observation Population genomic analysis identified three geographic genetic lineages.
Observation The NE lineage diverged in the middle Pleistocene.
Observation The SW and NW lineages diverged about 2400 years ago.
Observation Nine populations were identified as monoclonal.
Observation Vegetative propagules dispersed up to 1041 km.
Observation Lineage-specific positively selected genes were identified as potentially involved in adaptation to saline wetlands and high altitude.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Vegetative propagules dispersed up to 1041 km.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Outcome: dispersal distancee0
Direction: up toe0
Value: up to 1041 kme0

Verbatim

e0
“dispersal distance was up to 1041 km”
✓ located verbatim in the source · abstract, characters 1093–1129

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Lineage-specific positively selected genes were identified as potentially involved in adaptation to saline wetlands and high altitude.

Taxon: Sparganium stoloniferumSparganium stoloniferumt0
Outcome: lineage-specific positively selected genese0
Qualifier: likely to be involved in adaptations to saline wetlands and high-altitude environmentse0

Verbatim

e0
“identified lineage-specific positively selected genes that are likely to be involved in adaptations to saline wetlands and high-altitude environments”
✓ located verbatim in the source · abstract, characters 1205–1354

t0
“Sparganium stoloniferum”
✓ located verbatim in the source · title, characters 47–70

Title

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality, local adaptation and demographic history

Yang Zou; Zijie Wei; Keyan Xiao; et al. Molecular Ecology Resources 2023. doi:10.1111/1755-0998.13850

Other claims from this paper (7)

Method / resource A high-quality chromosome-level genome of Sparganium stoloniferum was assembled.
Observation Population genomic analysis identified three geographic genetic lineages.
Observation The NE lineage diverged in the middle Pleistocene.
Observation The SW and NW lineages diverged about 2400 years ago.
Observation Nine populations were identified as monoclonal.
Observation Vegetative propagule dispersal was identified among five populations spanning three basins in the NE lineage.
Observation Vegetative propagules dispersed up to 1041 km.

Observationobservedoriginal resultmeasured

Claim · model-written summary

S. stoloniferum was non-monophyletic.

Taxon: S. stoloniferumSparganium stoloniferume0
Outcome: Non-monophylye0

Not reportedDirection

Verbatim

e0
“Non-monophyly was revealed in three species: S. erectum, S. eurycarpum, and S. stoloniferum.”
✓ located verbatim in the source · abstract, characters 864–956

Title

A reappraisal of the phylogeny and historical biogeography of Sparganium (Typhaceae) using complete chloroplast genomes

Qiaoyu Zhang; Eugeny A. Belyakov; Alexander G. Lapirov; et al. BMC Plant Biology 2022. doi:10.1186/s12870-022-03981-3

Other claims from this paper (15)

Observation Nineteen Sparganium chloroplast genomes shared conserved structure, gene content and order.
Method / resource Phylogenomic analysis gave a well-resolved phylogeny with robust support for most clades.
Observation S. erectum was non-monophyletic.
Observation S. eurycarpum was non-monophyletic.
Observation The Sparganium subgenera split around 30.67 Ma in the middle Oligocene.
Observation Xanthosparganium diversified in the late Oligocene and Miocene.
Observation The subgenus Sparganium diversified in the late Pliocene and Pleistocene.
Observation The two Sparganium subgenera may have originated in East Eurasia and North America.
Recommendation S. stoloniferum subsp. choui may merit recognition as S. choui.
Recommendation Subspecies of S. erectum may be distinct species.
Association Diversification time estimates for the two subgenera corresponded to species and nucleotide diversity.
Observation Most Xanthosparganium likely originated in East Eurasia and North America.
Observation Xanthosparganium dispersed into West Eurasia and Australia.
Observation Most of subgenus Sparganium likely originated in North America.
Observation Subgenus Sparganium then dispersed into Eurasia.

Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

S. stoloniferum subsp. choui may merit recognition as S. choui.

Taxon: S. stoloniferum subsp. chouiSparganium stoloniferum subsp. chouie0
Outcome: may be more appropriately identified as S. chouie0

Verbatim

e0
“S. stoloniferum subsp. choui may be more appropriately identified as S. choui”
✓ located verbatim in the source · abstract, characters 1493–1570

Title

A reappraisal of the phylogeny and historical biogeography of Sparganium (Typhaceae) using complete chloroplast genomes

Qiaoyu Zhang; Eugeny A. Belyakov; Alexander G. Lapirov; et al. BMC Plant Biology 2022. doi:10.1186/s12870-022-03981-3

Other claims from this paper (15)

Observation Nineteen Sparganium chloroplast genomes shared conserved structure, gene content and order.
Method / resource Phylogenomic analysis gave a well-resolved phylogeny with robust support for most clades.
Observation S. erectum was non-monophyletic.
Observation S. eurycarpum was non-monophyletic.
Observation S. stoloniferum was non-monophyletic.
Observation The Sparganium subgenera split around 30.67 Ma in the middle Oligocene.
Observation Xanthosparganium diversified in the late Oligocene and Miocene.
Observation The subgenus Sparganium diversified in the late Pliocene and Pleistocene.
Observation The two Sparganium subgenera may have originated in East Eurasia and North America.
Recommendation Subspecies of S. erectum may be distinct species.
Association Diversification time estimates for the two subgenera corresponded to species and nucleotide diversity.
Observation Most Xanthosparganium likely originated in East Eurasia and North America.
Observation Xanthosparganium dispersed into West Eurasia and Australia.
Observation Most of subgenus Sparganium likely originated in North America.
Observation Subgenus Sparganium then dispersed into Eurasia.

Sparganium stoloniferum 36 claims

36 claims