Intervention effectmodel-written summary

PAP6-like silencing reduced relative water content under freezing stress.

A claim from Identification of Winter-Responsive Proteins in Bread Wheat Using Proteomics Analysis and Virus-Induced Gene Silencing (VIGS) · 2016

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

PAP6-like silencing reduced relative water content under freezing stress.

Treatment
VIGS (virus-induced gene silencing)e0
Gene
PAP6-likee0
Outcome
relative water content (RWC)e0
Direction
reducede0
Qualifier
freezing stresse0
Comparator
viral control plantse0

Not reportedMaterialCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleSettingValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“VIGS (virus-induced gene silencing)-treated plants generated for PAP6-like were subjected to freezing stress, these plants had more serious droop and wilt, an increased rate of relative electrolyte leakage, reduced relative water content (RWC) and decreased tocopherol levels when compared with viral control plants.”

✓ located verbatim in the source · abstract, characters 1390–1706
e1

“cold responses in wheat”

✓ located verbatim in the source · abstract, characters 72–95

Title

Identification of Winter-Responsive Proteins in Bread Wheat Using Proteomics Analysis and Virus-Induced Gene Silencing (VIGS)

Ning Zhang; Wang Huo; Lingran Zhang; et al. Molecular & Cellular Proteomics 2016. doi:10.1074/mcp.m115.057232

Other claims from this paper (13)

Record rev-56f0d62a5ebbdfbd317ba75eeffadbf9a58ceba543651799e9c67f2b4a6c49d4 · schema claims-v0.9 · position 11 in the model’s answer

loss of function · physiology: water · Triticum aestivum (wheat)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this claim · 3 in the opposite direction

  1. positive
  2. positive
  3. positive
  4. negative
See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.

Functional evidence on PAP6-like

Claims that state a gain or loss of function of this gene and what it did to a trait, compared with wild type or a control.

PAP6-like

Triticum aestivum (wheat)1 paper · 1 traitTested in one paper only

Only one paper in the store tests this gene's function in Triticum aestivum (wheat).

Cold tolerance1 paper

  1. Promotes
  2. Promotes
  3. Promotes
  4. Promotes

The program reads each claim's manipulation and the direction of the trait, and from them the gene's role (gain and more, or loss and less, means it promotes the trait). Roles are read by program from each claim's wording. Pairs of papers on the same host, gene and trait were checked claim by claim by two model readers; a pair is marked checked only when both accept it. Gene layer v0.8, 21 trait classes.