Intervention effectmodel-written summary

Xcc infection induced Cs9g12620 transcription in a PthA4-dependent manner.

A claim from Xanthomonas citri subsp. citri type III effector PthA4 directs the dynamical expression of a putative citrus carbohydrate-binding protein gene for canker formation · 2024

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Taxon: citrusCitrust0
Treatment: infection with Xcce0
Interactor: Xcce0pathogen
Gene: Cs9g12620e0
Outcome: transcription of Cs9g12620e0
Direction: inducede0

Not reportedMaterialCompoundOrgan / stageSecond interactorSecond interactor roleComparatorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

*Citrus* · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0
“the transcription of Cs9g12620 was induced by infection with Xcc in a PthA4-dependent manner”
✓ located verbatim in the source · abstract, characters 426–518

t0
“citrus”
✓ located verbatim in the source · title, characters 102–108

Title

Xanthomonas citri subsp. citri type III effector PthA4 directs the dynamical expression of a putative citrus carbohydrate-binding protein gene for canker formation

Xinyu Chen; Huasong Zou; Tao Zhuo; et al. eLife 2024. doi:10.7554/elife.91684

Other claims from this paper (7)

Observation PthA4 bound to a putative effector-binding element in the Cs9g12620 promoter.
Mechanism PthA4 suppressed Cs9g12620 promoter activity.
Mechanism CsLOB1 bound to the Cs9g12620 promoter and activated expression.
Intervention effect CsLOB1 silencing significantly reduced Cs9g12620 expression.
Observation PhtA4 interacted with CsLOB1.
Mechanism PhtA4 feedback suppressed CsLOB1 induction of Cs9g12620 expression.
Mechanism Cs9g12620 was required for optimal development of canker symptoms.

Record rev-da37fac8b81bb31ae42478525074d463c454ae5d8e986fb57739b2b3810e84c4 · schema claims-v0.9 · position 1 in the model’s answer

infection · molecular: expression · CitrusPositive and negative results

6 papers: 4 positive, 2 negative or no effect

1 paper in the same direction as this claim · 4 in the opposite direction

positive
HIPVs released from T. urticae-infested sour orange plants stimulated the oxylipin biosynthetic gene lipoxygenase2 (LOX2) in Cleopatra mandarin plants.
Tetranychus urticae‐triggered responses promote genotype‐dependent conspecific repellence or attractiveness in citrus · 2015
Opposite direction
positive
Infection upregulated CsgabP, CsgabT and CsgabD transcripts in citrus leaves.
Not Just a Cycle: Three gab Genes Enable the Non-Cyclic Flux Toward Succinate via GABA Shunt in ‘Candidatus Liberibacter asiaticus’–Infected Citrus · 2021
Opposite direction
positive
BABA plus psyllid feeding increased PR-2 expression versus BABA alone, feeding alone, or controls.
Induced resistance against the Asian citrus psyllid, Diaphorina citri, by β-aminobutyric acid in citrus · 2013 · compared with plants exposed to BABA, D. citri feeding alone or control plants
Opposite direction
positive
Xac infection stimulated expression of NPR1-like genes.
Genome-wide analysis of NPR1-like genes in citrus species and expression analysis in response to citrus canker (Xanthomonas axonopodis pv. citri) · 2024
Opposite direction
negative
CTV infection significantly lowered CsERF1 expression in roots relative to healthy plants.
Citrus transcription factor CsERF1 is involved in the response to citrus tristeza disease · 2025 · compared with healthy plants
Same direction

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.

Other papers on the same question

infection · molecular: expression · CitrusPositive and negative results