Capsicum 11,206 claims

Claim · model-written summary

RNA libraries of C. annuum and C. frutescens revealed cryptic viruses (BPEV, PCV1, PCV2).

Taxon

Capsicum spp.Capsicumt0

Interactor

cryptic virusese0other

Outcome

presence of cryptic virusese0

Verbatim

t0

“Capsicum spp.”

e0

“revealed the presence of cryptic viruses”

Claim · model-written summary

RNA libraries also revealed vector-transmitted symptomatic viruses (CMV, PeVYV, PepSMoV).

Taxon

Capsicum spp.Capsicumt0

Interactor

symptomatic virusese0pathogen

Outcome

symptomatic viruses transmitted by vectorse0

Verbatim

t0

“Capsicum spp.”

e0

“symptomatic viruses transmitted by vectors”

Claim · model-written summary

Pepper mild mottle virus, a symptomatic mechanically transmitted virus, was detected.

Taxon

Capsicum spp.Capsicumt0

Interactor

pepper mild mottle virusPepper mild mottle viruse0pathogen

Outcome

mechanically transmitted pepper mild mottle viruse0

Verbatim

t0

“Capsicum spp.”

e0

“mechanically transmitted pepper mild mottle virus”

Claim · model-written summary

This is the first report of mechanically transmitted symptomatic viruses from Colombia.

Taxon

Capsicum spp.Capsicumt0

Interactor

mechanically transmitted symptomatic virusese0pathogen

Outcome

first reporte0

Setting

Colombiae0

Verbatim

t0

“Capsicum spp.”

e0

“the first report of mechanically transmitted symptomatic viruses from Colombia”

Claim · model-written summary

RNA-seq identified 149,531 differentially expressed genes across 39 resistant vs susceptible, time vs time and tissue vs tissue comparisons in chili pepper infected by P. capsici.

Taxon

chili pepperCapsicumt0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

differentially expressed genes (DEGs)e0

Value

149,531e0

Not reportedDirection

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“There were 149,531 differentially expressed genes (DEGs) from 39 different R vs. S, time vs. time, and tissue vs. tissue comparisons”

Claim · model-written summary

Of the DEGs, 75,520 (51%) showed higher expression across all tissues and post-inoculation times.

Taxon

chili pepperCapsicumt0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

DEGse0

Direction

higher expressione0

Value

75,520e0

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“A total of 75,520 DEGs (51%) showed higher expression”

Claim · model-written summary

Of the DEGs, 74,011 (49%) showed lower expression across all tissues and post-inoculation times.

Taxon

chili pepperCapsicumt0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

DEGse0

Direction

lower expressione0

Value

74,011e0

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“A total of 75,520 DEGs (51%) showed higher expression, whereas 74,011 (49%) demonstrated lower expression across all tissues and times of post-inoculation”

Claim · model-written summary

The number of DEGs with higher expression decreased across post-inoculation times in the tissue samples, with the fewest at 72 h post-inoculation.

Taxon

chili pepperCapsicumt0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

number of DEGs with higher expressione0

Direction

decreasede0

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“The total number of DEGs with higher expression for the different tissue samples decreased across times of post-inoculation, where the 72h post-inoculation showed the least number of genes”

Claim · model-written summary

Roots generally showed a higher number of DEGs than stems and leaves.

Taxon

chili pepperCapsicumt0

Organ / stage

rootse0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

number of DEGse0

Direction

highere0

Comparator

the stems and the leavese0

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“The roots generally showed a higher number of DEGs compared to the stems and the leaves”

Claim · model-written summary

Network analysis showed that genes functioning in defense response to fungal infection were also involved in carbohydrate metabolism and ADP binding.

Taxon

chili pepperCapsicumt0

Interactor

Phytophthora capsiciPhytophthora capsicit0pathogen

Outcome

genes with functions related to defense response to fungal infection were also involved with carbohydrate metabolism and ADP bindinge0

Not reportedDirection

Verbatim

t0

“chili pepper (Capsicum annuum L.) under infection by Phytophthora capsici”

e0

“Network analyses of DEGs demonstrated that genes with functions related to defense response to fungal infection were also involved with carbohydrate metabolism and ADP binding”