Paper · 2007 · The Plant Journal

Molecular cloning and function analysis of the stay green gene in rice

Huawu Jiang; Meiru Li; Naiting Liang; et al.

14
claims
26
verbatim quotes
272
citations
2
research areas
—
Not open access

Abstract

Chloroplasts undergo drastic morphological and physiological changes during senescence with a visible symptom of chlorophyll (Chl) degradation. A stay green mutant was identified and then isolated from the japonica rice (Oryza sativa) cv. Huazhiwu by gamma-ray irradiation. The stay green mutant was characterized by Chl retention, stable Chl-protein complexes, and stable thylakoid membrane structures, but lost its photosynthetic competence during senescence. The gene, designated Stay Green Rice (SGR), was cloned by a positional cloning strategy encoding an ancient protein containing a putative chloroplast transit peptide. SGR protein was found in both soluble and thylakoid membranes in rice. SGR, like the gene for pheophorbide a oxygenase (PaO), was constitutively expressed, but was upregulated by dark-induced senescence in rice leaves. Senescence-induced expression of SGR and PaO was enhanced by ABA, but inhibited by cytokinin. Overexpression of SGR reduced the number of lamellae in the grana thylakoids and reduced the Chl content of normally growing leaves. This indicates that upregulation of SGR increases Chl breakdown during senescence in rice. A small quantity of chlorophyllide a accumulated in sgr leaves, but this also accumulated in wild-type rice leaves during senescence. Some pheophorbide a was detected in sgr leaves in the dark. According to these observations, we propose that SGR may be involved in regulating or taking part in the activity of PaO, and then may influence Chl breakdown and degradation of pigment-protein complex.

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Claims 14

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

A stay-green rice mutant was isolated by irradiation.

Material
stay green mutante0
Treatment
gamma-ray irradiatione0
Outcome
stay green mutant was identified and then isolatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“A stay green mutant was identified and then isolated from the japonica rice (Oryza sativa) cv. Huazhiwu by gamma-ray irradiation”

✓ located verbatim in the source · abstract, characters 144–272 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The mutant retained chlorophyll, chlorophyll-protein complexes and thylakoid structures.

Material
stay green mutante0
Outcome
Chl retention, stable Chl-protein complexes, and stable thylakoid membrane structurese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The stay green mutant was characterized by Chl retention, stable Chl-protein complexes, and stable thylakoid membrane structures”

✓ located verbatim in the source · abstract, characters 274–402 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The mutant lost photosynthetic competence during senescence.

Material
stay green mutante1
Outcome
lost its photosynthetic competence during senescencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“lost its photosynthetic competence during senescence”

✓ located verbatim in the source · abstract, characters 408–460 · show in text ↑
e1

“A stay green mutant was identified and then isolated from the japonica rice (Oryza sativa) cv. Huazhiwu by gamma-ray irradiation”

✓ located verbatim in the source · abstract, characters 144–272 · show in text ↑
t0

“stay green gene in rice”

✓ located verbatim in the source · title, characters 47–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SGR was cloned and encoded a protein with a putative chloroplast transit peptide.

Gene
Stay Green Rice (SGR)e0
Outcome
cloned by a positional cloning strategy encoding an ancient protein containing a putative chloroplast transit peptidee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The gene, designated Stay Green Rice (SGR), was cloned by a positional cloning strategy encoding an ancient protein containing a putative chloroplast transit peptide”

✓ located verbatim in the source · abstract, characters 462–627 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SGR protein occurred in soluble and thylakoid membranes.

Gene
SGR proteine0
Outcome
found in both soluble and thylakoid membranese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“SGR protein was found in both soluble and thylakoid membranes in rice”

✓ located verbatim in the source · abstract, characters 629–698 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SGR and PaO were constitutively expressed and upregulated in dark-induced senescence.

Organ / stage
rice leavese0
Gene
SGRe0
Outcome
constitutively expressed, but was upregulated by dark-induced senescencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“SGR, like the gene for pheophorbide a oxygenase (PaO), was constitutively expressed, but was upregulated by dark-induced senescence in rice leaves”

✓ located verbatim in the source · abstract, characters 700–846 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABA enhanced senescence-induced expression of SGR and PaO.

Treatment
ABAe0
Gene
SGR and PaOe0
Outcome
Senescence-induced expression of SGR and PaOe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Senescence-induced expression of SGR and PaO was enhanced by ABA”

✓ located verbatim in the source · abstract, characters 848–912 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Cytokinin inhibited senescence-induced expression of SGR and PaO.

Treatment
cytokinine0
Gene
SGR and PaOe1
Outcome
Senescence-induced expression of SGR and PaOe1
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“inhibited by cytokinin”

✓ located verbatim in the source · abstract, characters 918–940 · show in text ↑
e1

“Senescence-induced expression of SGR and PaO was enhanced by ABA”

✓ located verbatim in the source · abstract, characters 848–912 · show in text ↑
t0

“Molecular cloning and function analysis of the stay green gene in rice”

✓ located verbatim in the source · title, characters 0–70 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SGR overexpression reduced grana thylakoid lamellae.

Treatment
Overexpression of SGRe0
Gene
SGRe0
Outcome
number of lamellae in the grana thylakoidse0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of SGR reduced the number of lamellae in the grana thylakoids”

✓ located verbatim in the source · abstract, characters 942–1018 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SGR overexpression reduced chlorophyll content in normal leaves.

Treatment
Overexpression of SGRe0
Gene
SGRe0
Outcome
Chl content of normally growing leavese0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of SGR reduced the number of lamellae in the grana thylakoids and reduced the Chl content of normally growing leaves”

✓ located verbatim in the source · abstract, characters 942–1073 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A small amount of chlorophyllide a accumulated in mutant leaves.

Material
sgre0
Organ / stage
leavese0
Outcome
A small quantity of chlorophyllide a accumulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“A small quantity of chlorophyllide a accumulated in sgr leaves”

✓ located verbatim in the source · abstract, characters 1166–1228 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Chlorophyllide a also accumulated in wild-type rice leaves during senescence.

Material
wild-type ricee0
Organ / stage
leavese0
Outcome
this also accumulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“this also accumulated in wild-type rice leaves during senescence”

✓ located verbatim in the source · abstract, characters 1234–1298 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pheophorbide a was detected in sgr leaves in darkness.

Material
sgre0
Organ / stage
leavese0
Outcome
pheophorbide a was detectede0
Qualifier
in the darke0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Some pheophorbide a was detected in sgr leaves in the dark”

✓ located verbatim in the source · abstract, characters 1300–1358 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The authors proposed that SGR may affect PaO activity and chlorophyll breakdown.

Gene
SGRe0
Outcome
Chl breakdown and degradation of pigment-protein complexe0
Qualifier
activity of PaOe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“SGR may be involved in regulating or taking part in the activity of PaO, and then may influence Chl breakdown and degradation of pigment-protein complex”

✓ located verbatim in the source · abstract, characters 1409–1561 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 66–70 · show in text ↑

(+)-abscisic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

69 papers: 54 positive, 15 negative or no effect

53 papers in the same direction as this paper · 15 in the opposite direction

  1. positive
  2. negative
  3. negative

65 papers more in this group

See all 69 papers →

class · molecular: expression · Oryza sativa (rice)Positive and negative results

45 papers: 29 positive, 16 negative or no effect

15 papers in the same direction as this paper · 29 in the opposite direction

  1. positive
  2. positive
  3. positive

41 papers more in this group

See all 45 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.