Paper · 2010 · Illinois Digital Environment for Access to Learning and Scholarship (University of Illinois at Urbana-Champaign)

Functional studies of lignin biosynthesis genes and putative flowering gene in Miscanthus x giganteus and studies on indolyl glucosinolate biosynthesis and translocation in Brassica oleracea

Hyoung Seok Kim

12
claims
19
verbatim quotes
5
citations
3
research areas
—
Not open access

Abstract

The first topic area of this thesis involved studies on the accumulation and translocation of glucosinolates (GSs), bioactive secondary plant compounds, in broccoli plants. Changes in GS accumulation and gene expression levels in response to exogeneous methyl jasmonate (MeJA) treatment were analyzed in different tissue types at different developmental stages of broccoli. Greater accumulation of GSs with MeJA treatment was observed in apical leaves of broccoli seedlings and florets of plants at harvest maturity. Increases in indolyl GS in apical leaves of seedlings and florets were coupled with the up-regulation of indolyl GS biosynthesis genes. The accumulation of indolyl GSs appears to be modulated by MeJA treatment in an organ-specific manner for optimal distribution of defense substances in the plant. Metabolic profiling of hydrophilic metabolites using GC-MS demonstrated increased accumulation of various phenolics, ascorbates and amino acids in broccoli tissues after MeJA treatment. Distinct changes in carbohydrate levels observed between different tissues (vegetative leaves and floret tissues) of broccoli plants after treatment suggest that carbon metabolism is differentially modulated by MeJA treatment in different tissue types depending on sink-source relationships. Reduced levels of hexose sugars and tricarboxylic acid intermediates after MeJA treatment may reflect the increased requirement for carbon and energy needed to drive secondary product biosynthesis to accumulate metabolites for defense against insects and other herbivores. Substantial increases of indolyl and aromatic GSs after exogenous treatment with MeJA in stem and petioles of seedlings and the existence of intact indolyl-GS forms in phloem exudates suggest enhanced de novo synthesis in combination with active transport. Indoly GSs share structural similarities with the auxin, IAA, and may interact with components of the auxin transport system for intra- and extra-cellular transport or translocation. Application of the auxin efflux inhibitor, 1-naphthylphthalamic acid (NPA) reduced MeJA-mediated accumulation of indolyl GSs in broccoli florets and seedling tissues. NPA did not inhibit expression of indolyl GS biosynthesis genes shown to be upregulated by MeJA treatment or the accumulation of tryptophan, the amino acid precursor of indolyl GSs. Exogenous application of benzyl GS to Arabidopsis roots induced ectopic expression of the PIN1 protein associated with the auxin transport system similar to treatment with NPA, again suggesting GS interaction with the auxin efflux carrier system. The inhibitory effect of NPA on MeJA-mediated accumulation of GS may be due to competitive binding of NPA to auxin efflux carrier components and that GS transport is mediated by the auxin transport system. The inhibitory effect of NPA on indolyl and aromatic GS accumulation and the bioactivity of exogenous treatment of these GS compounds in PIN1 localization, Arabidopsis root growth, and gravitrophic response suggest that indolyl and aromatic GSs may be antagonistic to IAA transport and biosynthesis. Indolyl and aromatic GSs can also be potentially converted into IAA by hydrolysis. This intrinsic feature of GSs may be the part of a sophisticated regulatory process where the metabolic pathways in the plant shift from active growth to a reversible defense posture in response to biotic or abiotic stress. It seems likely that indolyl and aromatic GSs are important compounds that provide connections between jasmonate and auxin signaling. Further studies are required to reveal the regulatory mechanism for crosstalk between the two hormones. The third part of this research was to investigate effect of selenium fertilization and MeJA treatment on accumulation of GSs in broccoli florets. Increasing dietary intake of the element selenium (Se) has been shown to reduce the risk of cancer. Simultaneous enhancement of both Se and GS concentrations in broccoli floret tissue were conducted through the combined treatment of MeJA with Se fertilization. A low level of Se fertilization (concentration) with MeJA treatment displayed no significant changes in total aliphatic GS concentrations with 90% and 50% increases in indolyl and total GSs concentrations, respectively. This result suggests that Se- and GS-enriched broccoli with improved health-promoting properties can be generated by this combined treatment. The second topic of this thesis was conducted to provide basic information required to improve biomass quality and productivity and develop tools for gene transformation in Miscanthus x giganteus. The perennial rhizomatous grass, Miscanthus x giganteus is an ideal biomass crop due to its rapid vegetative growth and high biomass yield potential. As a naturally occurring sterile hybrid, M. x giganteus must be propagated vegetatively by mechanicalling divided rhizomes or from micropropagated plantlets. The effect of callus type, age and culture methods on regeneration competence was studied to improve regeneration efficiency and shorten the period of tissue culture in M. x giganteus propagation. Seven lignin biosynthesis genes and one putative flowering gene were isolated from M. x giganteus by PCR reactions using maize othologous sequences. Southern hybridization and nuclear DNA content analysis indicated that the genes isolated from M. x giganteus exist in the genome of other Miscanthus species as multiple copies. Analysis of lignin content and histological staining of lignin deposition indicated that higher lignin content is found in mature stem node tissues compared to young leaves and apical stem nodal tissues. Cell wall lignification is associated with increasing tissue maturity in Miscanthus species. RNAi and antisense constructs harboring sequences of these genes were developed to generate Miscanthus transgenic plants with suppressed of lignin biosynthesis and delayed flowering.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MeJA treatment increased glucosinolate accumulation in apical leaves of broccoli seedlings.

Organ / stage
apical leavese0
Treatment
MeJA treatmente0
Outcome
accumulation of GSse0
Direction
Greatere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Greater accumulation of GSs with MeJA treatment was observed in apical leaves of broccoli seedlings and florets of plants at harvest maturity”

✓ located verbatim in the source · abstract, characters 374–515 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Indolyl glucosinolate increases in broccoli apical leaves and florets are associated with up-regulation of indolyl GS biosynthesis genes.

Gene
indolyl GS biosynthesis genese0
Outcome
indolyl GSe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Increases in indolyl GS in apical leaves of seedlings and florets were coupled with the up-regulation of indolyl GS biosynthesis genes”

✓ located verbatim in the source · abstract, characters 517–651 · show in text ↑
e1

“Changes in GS accumulation and gene expression levels in response to exogeneous methyl jasmonate (MeJA) treatment were analyzed in different tissue types at different developmental stages of broccoli”

✓ located verbatim in the source · abstract, characters 173–372 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MeJA treatment increased phenolics, ascorbates and amino acids in broccoli tissues.

Treatment
MeJA treatmente0
Outcome
phenolics, ascorbates and amino acidse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Metabolic profiling of hydrophilic metabolites using GC-MS demonstrated increased accumulation of various phenolics, ascorbates and amino acids in broccoli tissues after MeJA treatment”

✓ located verbatim in the source · abstract, characters 816–1000 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MeJA treatment reduced hexose sugars and tricarboxylic acid intermediates in broccoli.

Treatment
MeJA treatmente0
Outcome
hexose sugars and tricarboxylic acid intermediatese0
Direction
Reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Reduced levels of hexose sugars and tricarboxylic acid intermediates after MeJA treatment”

✓ located verbatim in the source · abstract, characters 1294–1383 · show in text ↑
e1

“Changes in GS accumulation and gene expression levels in response to exogeneous methyl jasmonate (MeJA) treatment were analyzed in different tissue types at different developmental stages of broccoli”

✓ located verbatim in the source · abstract, characters 173–372 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The auxin efflux inhibitor NPA reduced MeJA-mediated accumulation of indolyl GSs in broccoli florets and seedling tissues.

Treatment
1-naphthylphthalamic acid (NPA)e0
Outcome
accumulation of indolyl GSse0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Application of the auxin efflux inhibitor, 1-naphthylphthalamic acid (NPA) reduced MeJA-mediated accumulation of indolyl GSs in broccoli florets and seedling tissues”

✓ located verbatim in the source · abstract, characters 2007–2172 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Seven lignin biosynthesis genes and one putative flowering gene were isolated from Miscanthus x giganteus.

Taxon
Miscanthus x giganteusMiscanthus ×giganteust0
Gene
lignin biosynthesis genese0
Outcome
isolatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Miscanthus x giganteus
Miscanthus ×giganteus · Taxon · picture from its Wikimedia Commons categoryDavid Brinicombe · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“lignin biosynthesis genes and putative flowering gene in Miscanthus x giganteus”

✓ located verbatim in the source · title, characters 22–101 · show in text ↑
e0

“Seven lignin biosynthesis genes and one putative flowering gene were isolated from M. x giganteus by PCR reactions”

✓ located verbatim in the source · abstract, characters 5126–5240 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Lignin content is higher in mature stem node tissues than in young leaves of Miscanthus x giganteus.

Taxon
Miscanthus x giganteusMiscanthus ×giganteust0
Organ / stage
mature stem node tissuese0
Outcome
lignin contente0
Direction
highere0
Comparator
young leavese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Miscanthus x giganteus
Miscanthus ×giganteus · Taxon · picture from its Wikimedia Commons categoryDavid Brinicombe · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“lignin biosynthesis genes and putative flowering gene in Miscanthus x giganteus”

✓ located verbatim in the source · title, characters 22–101 · show in text ↑
e0

“higher lignin content is found in mature stem node tissues compared to young leaves and apical stem nodal tissues”

✓ located verbatim in the source · abstract, characters 5542–5655 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Low-level selenium fertilization with MeJA caused no significant change in total aliphatic glucosinolate concentrations in broccoli.

Treatment
low level of Se fertilization (concentration) with MeJA treatmente0
Outcome
total aliphatic GS concentrationse0
Direction
no significant changese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A low level of Se fertilization (concentration) with MeJA treatment displayed no significant changes in total aliphatic GS concentrations with 90% and 50% increases in indolyl and total GSs concentrations, respectively”

✓ located verbatim in the source · abstract, characters 4062–4280 · show in text ↑
e1

“Simultaneous enhancement of both Se and GS concentrations in broccoli floret tissue were conducted through the combined treatment of MeJA with Se fertilization”

✓ located verbatim in the source · abstract, characters 3901–4060 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low-level selenium fertilization with MeJA increased indolyl glucosinolate concentration by 90% in broccoli.

Treatment
low level of Se fertilization (concentration) with MeJA treatmente0
Outcome
indolyl and total GSs concentrationse0
Direction
increasese0
Value
90%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A low level of Se fertilization (concentration) with MeJA treatment displayed no significant changes in total aliphatic GS concentrations with 90% and 50% increases in indolyl and total GSs concentrations, respectively”

✓ located verbatim in the source · abstract, characters 4062–4280 · show in text ↑
e1

“Simultaneous enhancement of both Se and GS concentrations in broccoli floret tissue were conducted through the combined treatment of MeJA with Se fertilization”

✓ located verbatim in the source · abstract, characters 3901–4060 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low-level selenium fertilization with MeJA increased total glucosinolate concentration by 50% in broccoli.

Treatment
low level of Se fertilization (concentration) with MeJA treatmente0
Outcome
total GSs concentrationse0
Direction
increasese0
Value
50%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A low level of Se fertilization (concentration) with MeJA treatment displayed no significant changes in total aliphatic GS concentrations with 90% and 50% increases in indolyl and total GSs concentrations, respectively”

✓ located verbatim in the source · abstract, characters 4062–4280 · show in text ↑
e1

“Simultaneous enhancement of both Se and GS concentrations in broccoli floret tissue were conducted through the combined treatment of MeJA with Se fertilization”

✓ located verbatim in the source · abstract, characters 3901–4060 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The combined selenium and MeJA treatment can generate Se- and GS-enriched broccoli with improved health-promoting properties.

Treatment
combined treatmente0
Outcome
Se- and GS-enriched broccolie0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This result suggests that Se- and GS-enriched broccoli with improved health-promoting properties can be generated by this combined treatment”

✓ located verbatim in the source · abstract, characters 4282–4422 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Exogenous benzyl GS induced ectopic expression of the PIN1 protein in Arabidopsis roots, similar to NPA treatment.

Taxon
ArabidopsisArabidopsise0
Treatment
benzyl GSe0
Outcome
expression of the PIN1 proteine0
Direction
inducede0
Comparator
treatment with NPAe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Exogenous application of benzyl GS to Arabidopsis roots induced ectopic expression of the PIN1 protein associated with the auxin transport system similar to treatment with NPA”

✓ located verbatim in the source · abstract, characters 2356–2531 · show in text ↑

selenium atom · quality: phytochemicals · Brassica oleracea (wild cabbage)Results differ

11 papers: 8 positive, 3 negative or no effect

7 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. no effect
  3. negative

7 papers more in this group

See all 11 papers →

(-)-methyl jasmonate · quality: phytochemicals · Brassica oleracea (wild cabbage)Positive and negative results

12 papers: 8 positive, 4 negative or no effect

7 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. negative
  3. negative

8 papers more in this group

See all 12 papers →

fertilization · quality: phytochemicals · Brassica oleracea (wild cabbage)Results differ

66 papers: 57 positive, 9 negative or no effect

56 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. no effect
  3. no effect

62 papers more in this group

See all 66 papers →

fertilization · physiology: gas exchange · Brassica oleracea (wild cabbage)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.