Paper · 2002 · Proceedings of the National Academy of Sciences

Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis

Chang-Jun Liu; Jack W. Blount; Christopher L. Steele; et al.

8
claims
44
verbatim quotes
181
citations
2
research areas
—
Not open access

Abstract

In view of their perceived chemopreventive activities against hormone-dependent cancers, cardiovascular disease, and postmenopausal ailments, there is considerable interest in engineering plants to contain isoflavone phytoestrogens. However, attempts to date have only resulted in low levels of isoflavone accumulation in non-legumes. Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides. Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol, which could be increased by threefold on introduction of an alfalfa chalcone isomerase transgene. Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase, but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone. Introduction of IFS into the tt6/tt3 double mutant blocked in flavonol, and anthocyanin synthesis resulted in high levels of genistein. The bottleneck for constitutive isoflavone production in Arabidopsis is, therefore, competition for flavanone between IFS and endogenous flavonol synthesis, and the flavonol pathway is reciprocally but disproportionately affected by IFS.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Soybean IFS introduced into Arabidopsis produced low genistein glycoside levels.

Taxon
Arabidopsis thalianaArabidopsis thalianae0t0e2e3e4
Treatment
Introducing soybean isoflavone synthase (IFS)e0t0e2e3e4
Gene
soybean isoflavone synthase (IFS)e0t0e2e3e4
Outcome
genistein glycosidese0t0e2e3e4
Value
low levelse0t0e2e3e4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Wild type Arabidopsis leaves had high quercetin and kaempferol conjugate levels.

Material
wild-type A. thalianae0t0e1e3e4
Organ / stage
Leavese0t0e1e3e4
Outcome
conjugates of the flavonols quercetin and kaempferole0t0e1e3e4
Value
high levelse0t0e1e3e4

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

An alfalfa chalcone isomerase transgene increased flavonol conjugates threefold.

Treatment
introduction of an alfalfa chalcone isomerase transgenee0t0e1e2e3e4
Gene
alfalfa chalcone isomerasee0t0e1e2e3e4
Outcome
flavonol conjugatese0t0e1e2e3e4
Direction
increasede0t0e1e2e3e4
Value
threefolde0t0e1e2e3e4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“which could be increased by threefold on introduction of an alfalfa chalcone isomerase transgene.”

✓ located verbatim in the source · abstract, characters 585–682 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Coexpression of IFS and alfalfa chalcone isomerase did not raise genistein levels.

Taxon
ArabidopsisArabidopsise0t0e1e2e4
Treatment
expressing both IFS and alfalfa chalcone isomerasee0t0e1e2e4
Outcome
Levels of genisteine0t0e1e2e4
Direction
not increasede0t0e1e2e4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Coexpression reduced flavonol conjugates beyond the amount explained by isoflavone flux.

Taxon
ArabidopsisArabidopsise0t0e1e2e3
Treatment
expressing both IFS and alfalfa chalcone isomerasee0t0e1e2e3
Outcome
levels of flavonol conjugatese0t0e1e2e3
Direction
reducede0t0e1e2e3
Qualifier
greater extent than could be accounted for by flux into isoflavonee0t0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IFS introduction into the tt6/tt3 double mutant produced high genistein levels.

Taxon
ArabidopsisArabidopsise0t0e1e2e3e4
Material
tt6/tt3 double mutante0t0e1e2e3e4
Treatment
Introduction of IFSe0t0e1e2e3e4
Outcome
levels of genisteine0t0e1e2e3e4
Value
high levelse0t0e1e2e3e4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Introduction of IFS into the tt6/tt3 double mutant blocked in flavonol, and anthocyanin synthesis resulted in high levels of genistein.”

✓ located verbatim in the source · abstract, characters 897–1032 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativebasis n/a

Claim · model-written summary

Competition for flavanone with endogenous flavonol synthesis was identified as the bottleneck for constitutive isoflavone production.

Taxon
ArabidopsisArabidopsise0t0e1e2e3e4
Compound
flavanonee0t0e1e2e3e4
Outcome
constitutive isoflavone productione0t0e1e2e3e4
Qualifier
competition for flavanone between IFS and endogenous flavonol synthesise0t0e1e2e3e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The bottleneck for constitutive isoflavone production in Arabidopsis is, therefore, competition for flavanone between IFS and endogenous flavonol synthesis”

✓ located verbatim in the source · abstract, characters 1033–1188 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

IFS reciprocally and disproportionately affects the flavonol pathway.

Taxon
ArabidopsisArabidopsise0t0e1e2e3e4
Outcome
flavonol pathwaye0t0e1e2e3e4
Qualifier
reciprocally but disproportionately affectede0t0e1e2e3e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the flavonol pathway is reciprocally but disproportionately affected by IFS.”

✓ located verbatim in the source · abstract, characters 1194–1270 · show in text ↑
t0

“Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis”

✓ located verbatim in the source · title, characters 0–82 · show in text ↑
e1

“Introducing soybean isoflavone synthase (IFS) into Arabidopsis thaliana leads to accumulation of low levels of genistein glycosides.”

✓ located verbatim in the source · abstract, characters 335–467 · show in text ↑
e2

“Leaves of wild-type A. thaliana contain high levels of similar conjugates of the flavonols quercetin and kaempferol”

✓ located verbatim in the source · abstract, characters 468–583 · show in text ↑
e3

“Levels of genistein were not increased by expressing both IFS and alfalfa chalcone isomerase”

✓ located verbatim in the source · abstract, characters 683–775 · show in text ↑
e4

“but levels of flavonol conjugates were reduced to a greater extent than could be accounted for by flux into isoflavone.”

✓ located verbatim in the source · abstract, characters 777–896 · show in text ↑

Medicago sativa · molecular: metabolites · ArabidopsisPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

transgenic · molecular: metabolites · Arabidopsis thaliana (thale cress)Positive and negative results

15 papers: 10 positive, 5 negative or no effect

9 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

11 papers more in this group

See all 15 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.