Paper · 2014 · PLoS ONE

Tomato NAC Transcription Factor SlSRN1 Positively Regulates Defense Response against Biotic Stress but Negatively Regulates Abiotic Stress Response

Bo Liu; Zhigang Ouyang; Yafen Zhang; et al.

16
claims
29
verbatim quotes
122
citations
3
research areas
✓
Open access · cc-by

Abstract

Biotic and abiotic stresses are major unfavorable factors that affect crop productivity worldwide. NAC proteins comprise a large family of transcription factors that play important roles in plant growth and development as well as in responses to biotic and abiotic stresses. In a virus-induced gene silencing-based screening to identify genes that are involved in defense response against Botrytis cinerea, we identified a tomato NAC gene SlSRN1 (Solanum lycopersicum Stress-related NAC1). SlSRN1 is a plasma membrane-localized protein with transactivation activity in yeast. Expression of SlSRN1 was significantly induced by infection with B. cinerea or Pseudomonas syringae pv. tomato (Pst) DC3000, leading to 6-8 folds higher than that in the mock-inoculated plants. Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress. Silencing of SlSRN1 resulted in increased severity of diseases caused by B. cinerea and Pst DC3000. However, silencing of SlSRN1 resulted in increased tolerance against oxidative and drought stresses. Furthermore, silencing of SlSRN1 accelerated accumulation of reactive oxygen species but attenuated expression of defense genes after infection by B. cinerea. Our results demonstrate that SlSRN1 is a positive regulator of defense response against B. cinerea and Pst DC3000 but is a negative regulator for oxidative and drought stress response in tomato.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 16

Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus-induced gene silencing screening for defense against Botrytis cinerea identified the tomato NAC gene SlSRN1.

Interactor
Botrytis cinereaBotrytis cinereae0pathogen
Gene
SlSRN1e0
Outcome
defense response against Botrytis cinereae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In a virus-induced gene silencing-based screening to identify genes that are involved in defense response against Botrytis cinerea, we identified a tomato NAC gene SlSRN1”

✓ located verbatim in the source · abstract, characters 275–445 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SlSRN1 is a plasma membrane-localized protein with transactivation activity in yeast.

Gene
SlSRN1e0
Outcome
plasma membrane-localized protein with transactivation activity in yeaste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“SlSRN1 is a plasma membrane-localized protein with transactivation activity in yeast”

✓ located verbatim in the source · abstract, characters 490–574 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Expression of SlSRN1 was significantly induced 6-8 fold by B. cinerea infection relative to mock-inoculated plants.

Treatment
infection with B. cinereae0
Interactor
B. cinereaBotrytis cinereae0pathogen
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0
Value
6-8 foldse0
Comparator
mock-inoculated plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was significantly induced by infection with B. cinerea or Pseudomonas syringae pv. tomato (Pst) DC3000, leading to 6-8 folds higher than that in the mock-inoculated plants”

✓ located verbatim in the source · abstract, characters 576–768 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Expression of SlSRN1 was significantly induced 6-8 fold by Pseudomonas syringae pv. tomato DC3000 infection relative to mock-inoculated plants.

Treatment
Pseudomonas syringae pv. tomato (Pst) DC3000e0
Interactor
Pseudomonas syringae pv. tomato (Pst) DC3000Pseudomonas syringae pv. tomatoe0pathogen
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0
Value
6-8 foldse0
Comparator
mock-inoculated plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas syringae pv. tomato
Pseudomonas syringae pv. tomato · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was significantly induced by infection with B. cinerea or Pseudomonas syringae pv. tomato (Pst) DC3000, leading to 6-8 folds higher than that in the mock-inoculated plants”

✓ located verbatim in the source · abstract, characters 576–768 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of SlSRN1 was induced by salicylic acid.

Treatment
salicylic acide0
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress”

✓ located verbatim in the source · abstract, characters 770–905 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of SlSRN1 was induced by jasmonic acid.

Treatment
jasmonic acide0
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress”

✓ located verbatim in the source · abstract, characters 770–905 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of SlSRN1 was induced by 1-amino cyclopropane-1-carboxylic acid.

Treatment
1-amino cyclopropane-1-carboxylic acide0
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress”

✓ located verbatim in the source · abstract, characters 770–905 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of SlSRN1 was induced by drought stress.

Treatment
drought stresse0
Gene
SlSRN1e0
Outcome
Expression of SlSRN1e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress”

✓ located verbatim in the source · abstract, characters 770–905 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing of SlSRN1 increased the severity of disease caused by B. cinerea.

Treatment
Silencing of SlSRN1e0
Interactor
B. cinereaBotrytis cinereae0pathogen
Gene
SlSRN1e0
Outcome
severity of diseasese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Silencing of SlSRN1 resulted in increased severity of diseases caused by B. cinerea and Pst DC3000”

✓ located verbatim in the source · abstract, characters 907–1005 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing of SlSRN1 increased the severity of disease caused by Pst DC3000.

Treatment
Silencing of SlSRN1e0
Interactor
Pst DC3000e0pathogen
Gene
SlSRN1e0
Outcome
severity of diseasese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“Silencing of SlSRN1 resulted in increased severity of diseases caused by B. cinerea and Pst DC3000”

✓ located verbatim in the source · abstract, characters 907–1005 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silencing of SlSRN1 increased tolerance against oxidative stress.

Treatment
silencing of SlSRN1e0
Gene
SlSRN1e0
Outcome
tolerance against oxidative and drought stressese0
Direction
increasede0
Qualifier
oxidativee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“silencing of SlSRN1 resulted in increased tolerance against oxidative and drought stresses”

✓ located verbatim in the source · abstract, characters 1016–1106 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silencing of SlSRN1 increased tolerance against drought stress.

Treatment
silencing of SlSRN1e0
Gene
SlSRN1e0
Outcome
tolerance against oxidative and drought stressese0
Direction
increasede0
Qualifier
drought stressese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“silencing of SlSRN1 resulted in increased tolerance against oxidative and drought stresses”

✓ located verbatim in the source · abstract, characters 1016–1106 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Silencing of SlSRN1 accelerated accumulation of reactive oxygen species after infection by B. cinerea.

Treatment
silencing of SlSRN1e0
Interactor
B. cinereaBotrytis cinereae0pathogen
Gene
SlSRN1e0
Outcome
accumulation of reactive oxygen speciese0
Direction
acceleratede0
Qualifier
after infection by B. cinereae0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“silencing of SlSRN1 accelerated accumulation of reactive oxygen species but attenuated expression of defense genes after infection by B. cinerea”

✓ located verbatim in the source · abstract, characters 1121–1265 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing of SlSRN1 attenuated expression of defense genes after infection by B. cinerea.

Treatment
silencing of SlSRN1e0
Interactor
B. cinereaBotrytis cinereae0pathogen
Gene
SlSRN1e0
Outcome
expression of defense genese0
Direction
attenuatede0
Qualifier
after infection by B. cinereae0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato”

✓ located verbatim in the source · title, characters 0–6 · show in text ↑
e0

“silencing of SlSRN1 accelerated accumulation of reactive oxygen species but attenuated expression of defense genes after infection by B. cinerea”

✓ located verbatim in the source · abstract, characters 1121–1265 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors conclude that SlSRN1 is a positive regulator of defense response against B. cinerea and Pst DC3000.

Interactor
B. cinereaBotrytis cinereae0pathogen
Second interactor
Pst DC3000e0pathogen
Gene
SlSRN1e0
Outcome
defense response against B. cinerea and Pst DC3000e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Botrytis cinerea
Botrytis cinerea · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“SlSRN1 is a positive regulator of defense response against B. cinerea and Pst DC3000 but is a negative regulator for oxidative and drought stress response in tomato”

✓ located verbatim in the source · abstract, characters 1296–1460 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativebasis n/a

Claim · model-written summary

The authors conclude that SlSRN1 is a negative regulator of oxidative and drought stress response in tomato.

Gene
SlSRN1e0
Outcome
oxidative and drought stress responsee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“SlSRN1 is a positive regulator of defense response against B. cinerea and Pst DC3000 but is a negative regulator for oxidative and drought stress response in tomato”

✓ located verbatim in the source · abstract, characters 1296–1460 · show in text ↑

loss of function · Botrytis cinerea · Solanum lycopersicum (tomato)Positive and negative results

26 papers: 8 positive, 18 negative or no effect

17 papers in the same direction as this paper · 8 in the opposite direction

  1. negative
  2. negative
  3. positive

22 papers more in this group

See all 26 papers →

loss of function · disease · Solanum lycopersicum (tomato)Positive and negative results

155 papers: 63 positive, 92 negative or no effect

62 papers in the same direction as this paper · 92 in the opposite direction

  1. no effect
  2. positive
  3. negative

151 papers more in this group

See all 155 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.