Paper · 2009 · Molecular Biology

Isolation and characterization of an ABC-transporter cDNA clone from wheat (Triticum aestivum L.)

Xiaojun Hu; Zhengbin Zhang; Zhenyan Fu; et al.

11
claims
20
verbatim quotes
13
citations
2
research areas
—
Not open access

Abstract

The outmost layer of the surface of any land plant is covered with wax, which protects the inner tissues of plants. The Arabidopsis ATP binding cassette (ABC) transporter, Cer5, was found to be an exporter of wax molecules. Full-length wheat tacer5 cDNA, a sequence homologous to cer5, was isolated. Similar to other transporters of the ABCG subfamily, TaCer5 also has a typical basic structure of NBD-MSD (nucleotide-binding folds domain - membrane-spanning domain). Although the identity scores of TaCer5 and other ABCG transporters are not very high, amino acid residues of NBDs and MSDs are highly conserved among them. Tacer5 is a tissue-specific gene. The transcripts of tacer5 were found in leaf tissues and predominantly in stem tissues but were hardly detectable in root tissues. Stress inhibited the expression of tacer5. The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness and also by exogenous phytohormone abscisic acid and salicylic acid, although not significantly. Exposure to polyethylene glycol either increased the expression or decreased it, depending on the duration of exposure. All the above factors also decreased the extent of wax deposited on wheat leaves. It is therefore concluded that transport of wax molecules is affected by environmental factors.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Full-length wheat tacer5 cDNA homologous to cer5 was isolated.

Gene
tacer5e0
Outcome
cDNA, a sequence homologous to cer5, was isolatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Full-length wheat tacer5 cDNA, a sequence homologous to cer5, was isolated.”

✓ located verbatim in the source · abstract, characters 224–299 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TaCer5 has the ABCG transporter NBD-MSD structure.

Gene
TaCer5e0
Outcome
typical basic structure of NBD-MSDe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Similar to other transporters of the ABCG subfamily, TaCer5 also has a typical basic structure of NBD-MSD (nucleotide-binding folds domain - membrane-spanning domain).”

✓ located verbatim in the source · abstract, characters 300–467 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TaCer5 NBD and MSD residues are highly conserved among ABCG transporters despite low overall identity.

Gene
TaCer5e0
Outcome
amino acid residues of NBDs and MSDs are highly conservede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Although the identity scores of TaCer5 and other ABCG transporters are not very high, amino acid residues of NBDs and MSDs are highly conserved among them.”

✓ located verbatim in the source · abstract, characters 468–623 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

tacer5 transcripts occurred in leaves, predominated in stems, and were scarcely detected in roots.

Organ / stage
stem tissuese0
Gene
tacer5e0
Outcome
transcripts of tacer5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The transcripts of tacer5 were found in leaf tissues and predominantly in stem tissues but were hardly detectable in root tissues.”

✓ located verbatim in the source · abstract, characters 658–788 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity significantly decreased tacer5 expression.

Treatment
salinitye0
Outcome
expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness”

✓ located verbatim in the source · abstract, characters 832–925 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Low temperature significantly decreased tacer5 expression.

Treatment
low temperaturee0
Outcome
expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness”

✓ located verbatim in the source · abstract, characters 832–925 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

48-hour darkness significantly decreased tacer5 expression.

Treatment
48-hour-darknesse0
Outcome
expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness”

✓ located verbatim in the source · abstract, characters 832–925 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativenot significant (as stated)measured

Claim · model-written summary

Abscisic acid decreased expression without significance.

Treatment
abscisic acide0
Outcome
expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness and also by exogenous phytohormone abscisic acid and salicylic acid, although not significantly.”

✓ located verbatim in the source · abstract, characters 832–1022 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativenot significant (as stated)measured

Claim · model-written summary

Salicylic acid decreased expression without significance.

Treatment
salicylic acide0
Outcome
expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression was significantly decreased by salinity, low temperature, and 48-hour-darkness and also by exogenous phytohormone abscisic acid and salicylic acid, although not significantly.”

✓ located verbatim in the source · abstract, characters 832–1022 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Polyethylene glycol increased or decreased expression depending on exposure duration.

Treatment
polyethylene glycole0
Outcome
expressione0
Direction
increasede0
Qualifier
depending on the duration of exposuree0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Exposure to polyethylene glycol either increased the expression or decreased it, depending on the duration of exposure.”

✓ located verbatim in the source · abstract, characters 1023–1142 · show in text ↑
t0

“wheat (Triticum aestivum L.)”

✓ located verbatim in the source · title, characters 69–97 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The tested factors decreased wax deposited on wheat leaves.

Organ / stage
leavese0
Treatment
above factorse0
Outcome
extent of wax deposited on wheat leavese0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“All the above factors also decreased the extent of wax deposited on wheat leaves.”

✓ located verbatim in the source · abstract, characters 1143–1224 · show in text ↑

salicylic acid · molecular: expression · Triticum aestivum (wheat)Positive and negative results

35 papers: 29 positive, 6 negative or no effect

5 papers in the same direction as this paper · 29 in the opposite direction

  1. positive
  2. positive
  3. positive

31 papers more in this group

See all 35 papers →

salinity · molecular: expression · Triticum aestivum (wheat)Results differ

39 papers: 22 positive, 17 negative or no effect

16 papers in the same direction as this paper · 22 in the opposite direction

  1. positive
  2. positive
  3. positive

35 papers more in this group

See all 39 papers →

cold · molecular: expression · Triticum aestivum (wheat)Results differ

49 papers: 34 positive, 15 negative or no effect

14 papers in the same direction as this paper · 34 in the opposite direction

  1. positive
  2. positive
  3. positive

45 papers more in this group

See all 49 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.