Paper · 1998 · The Plant Journal

Low temperature regulates Arabidopsis Lhcb gene expression in a light‐independent manner

Juan Capel; José A. Jarillo; Francisco Madueño; et al.

10
claims
22
verbatim quotes
33
citations
3
research areas
✓
Open access

Abstract

Low temperature treatment of dark-grown seedlings of Arabidopsis thaliana results in a rapid increase in the amount of mRNAs encoding for the major polypeptides of the light-harvesting complex of photosystem II (Lhcb1 genes). This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts, indicating that low temperature differentially regulates the expression of the Arabidopsis Lhcb1 gene family in the dark. A 1.34 kb fragment of the Lhcb1*3 promoter is sufficient to confer low temperature regulation to a reporter gene in transgenic Arabidopsis etiolated seedlings, suggesting that the regulation is occurring at the transcriptional level. The cold-induced accumulation of Lhcb1*3 mRNA is not part of a general response to stressful conditions since no accumulation is detected in response to water stress, anaerobiosis or salt stress. The amount of Lhcb1*3 mRNA decrease in response to exogenous abscisic acid (ABA) suggesting that this phytohormone acts as a negative regulator. Moreover, the accumulation of Lhcb1*3 mRNAs in cold-treated ABA deficient etiolated seedlings is higher than that of wild-type and ABA insensitive etiolated seedlings, indicating that low temperature regulation of Lhcb1*3 is not mediated by ABA.

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Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low temperature rapidly increased Lhcb1 mRNA in dark grown Arabidopsis seedlings.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Organ / stage
dark-grown seedlingse0
Treatment
Low temperature treatmente0
Gene
Lhcb1 genese0
Outcome
amount of mRNAse0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Low temperature treatment of dark-grown seedlings of Arabidopsis thaliana results in a rapid increase in the amount of mRNAs encoding for the major polypeptides of the light-harvesting complex of photosystem II (Lhcb1 genes).”

✓ located verbatim in the source · abstract, characters 0–225 · show in text ↑
Observationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The cold induced mRNA increase was transient and mainly Lhcb1*3.

Taxon
ArabidopsisArabidopsist0
Gene
Lhcb1*3e0
Outcome
accumulation of Lhcb1*3 transcriptse0
Direction
increasee0
Qualifier
transiente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts”

✓ located verbatim in the source · abstract, characters 226–322 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

A 1.34 kb Lhcb1*3 promoter fragment conferred cold regulation to a reporter gene.

Taxon
ArabidopsisArabidopsise0
Organ / stage
etiolated seedlingse0
Gene
Lhcb1*3e0
Outcome
confer low temperature regulation to a reporter genee0
Value
1.34 kbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A 1.34 kb fragment of the Lhcb1*3 promoter is sufficient to confer low temperature regulation to a reporter gene in transgenic Arabidopsis etiolated seedlings”

✓ located verbatim in the source · abstract, characters 446–604 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that cold regulation of Lhcb1*3 occurs at transcription.

Taxon
ArabidopsisArabidopsist0
Gene
Lhcb1*3e1
Outcome
regulation is occurring at the transcriptional levele0
Qualifier
transcriptional levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“suggesting that the regulation is occurring at the transcriptional level.”

✓ located verbatim in the source · abstract, characters 606–679 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
e1

“This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts”

✓ located verbatim in the source · abstract, characters 226–322 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Water stress did not induce Lhcb1*3 mRNA accumulation.

Taxon
ArabidopsisArabidopsist0
Treatment
water stresse0
Gene
Lhcb1*3e1
Outcome
accumulatione0
Direction
no accumulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“no accumulation is detected in response to water stress, anaerobiosis or salt stress.”

✓ located verbatim in the source · abstract, characters 790–875 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
e1

“This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts”

✓ located verbatim in the source · abstract, characters 226–322 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Anaerobiosis did not induce Lhcb1*3 mRNA accumulation.

Taxon
ArabidopsisArabidopsist0
Treatment
anaerobiosise0
Gene
Lhcb1*3e1
Outcome
accumulatione0
Direction
no accumulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“no accumulation is detected in response to water stress, anaerobiosis or salt stress.”

✓ located verbatim in the source · abstract, characters 790–875 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
e1

“This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts”

✓ located verbatim in the source · abstract, characters 226–322 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salt stress did not induce Lhcb1*3 mRNA accumulation.

Taxon
ArabidopsisArabidopsist0
Treatment
salt stresse0
Gene
Lhcb1*3e1
Outcome
accumulatione0
Direction
no accumulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“no accumulation is detected in response to water stress, anaerobiosis or salt stress.”

✓ located verbatim in the source · abstract, characters 790–875 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
e1

“This increase is transient and seems to be due mainly to the accumulation of Lhcb1*3 transcripts”

✓ located verbatim in the source · abstract, characters 226–322 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Exogenous ABA decreased Lhcb1*3 mRNA.

Taxon
ArabidopsisArabidopsist0
Treatment
exogenous abscisic acid (ABA)e0
Gene
Lhcb1*3e0
Outcome
amount of Lhcb1*3 mRNAe0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The amount of Lhcb1*3 mRNA decrease in response to exogenous abscisic acid (ABA)”

✓ located verbatim in the source · abstract, characters 876–956 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Cold treated ABA deficient seedlings accumulated more Lhcb1*3 mRNA than wild type and ABA insensitive seedlings.

Taxon
ArabidopsisArabidopsist0
Material
ABA deficiente0
Organ / stage
etiolated seedlingse0
Outcome
accumulation of Lhcb1*3 mRNAse0
Direction
highere0
Comparator
wild-type and ABA insensitivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the accumulation of Lhcb1*3 mRNAs in cold-treated ABA deficient etiolated seedlings is higher than that of wild-type and ABA insensitive etiolated seedlings”

✓ located verbatim in the source · abstract, characters 1031–1187 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer cold regulation of Lhcb1*3 is not mediated by ABA.

Taxon
ArabidopsisArabidopsist0
Gene
Lhcb1*3e0
Outcome
low temperature regulation of Lhcb1*3e0
Qualifier
not mediated by ABAe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“indicating that low temperature regulation of Lhcb1*3 is not mediated by ABA.”

✓ located verbatim in the source · abstract, characters 1189–1266 · show in text ↑
t0

“Arabidopsis Lhcb”

✓ located verbatim in the source · title, characters 26–42 · show in text ↑

(+)-abscisic acid · molecular: expression · ArabidopsisPositive and negative results

82 papers: 57 positive, 25 negative or no effect

24 papers in the same direction as this paper · 57 in the opposite direction

  1. positive
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  3. positive

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drought · molecular: metabolites · ArabidopsisPositive and negative results

7 papers: 4 positive, 3 negative or no effect

2 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
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salinity · molecular: metabolites · ArabidopsisPositive and negative results

13 papers: 10 positive, 3 negative or no effect

2 papers in the same direction as this paper · 10 in the opposite direction

  1. positive
  2. positive
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cold · molecular: metabolites · Arabidopsis thaliana (thale cress)Positive and negative results

17 papers: 12 positive, 5 negative or no effect

11 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. no effect
  3. no effect

13 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.