Paper · 2003 · Plant Cell & Environment

Gene expression associated with N‐induced shifts in resource allocation in poplar

J. E. K. COOKE; K. A. BROWN; R. WU; et al.

5
claims
9
verbatim quotes
82
citations
3
research areas
✓
Open access

Abstract

ABSTRACT Surprisingly little is known about molecular mechanisms by which nitrogen (N) availability acts to modulate the growth of forest trees. To address this issue, differential display was used in conjunction with filter‐based arrays to identify 52 partial cDNA clones that were significantly regulated within days in response to limiting or luxuriant levels of NH 4 NO 3 fertilization in Populus trichocarpa Torr. & Gray × deltoides Bartr. ex Marsh. A subset of these cDNAs also demonstrated shifts in expression patterns in stem‐girdled trees, a manipulative physiology technique that disrupts phloem transport. Stem girdling also induced changes in glutamine and asparagine pools which were correlated with the observed changes in expression profiles for these genes. The identity of these genes provides insight into biochemical processes that are altered by N availability in poplar. Carbon–nitrogen interactions appear to figure prominently in the N‐response. The gene expression data suggest that N availability modulates the partitioning of C and N resources into metabolic fates that have the potential to alter both wood quality and quantity, including synthesis of vegetative storage proteins, cell wall components, and terpenoids.

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Claims 5

Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Nitrogen fertilization regulated 52 partial cDNA clones.

Taxon
Populus trichocarpa Torr. & Gray × deltoides Bartr. ex MarshPopulus trichocarpae0
Treatment
limiting or luxuriant levels of NH 4 NO 3 fertilizatione0
Outcome
partial cDNA clonese0
Value
52e0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus trichocarpa
Populus trichocarpa · Taxon · picture from its Wikimedia Commons categoryDaniel Mayer (mav) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“identify 52 partial cDNA clones that were significantly regulated within days in response to limiting or luxuriant levels of NH 4 NO 3 fertilization in Populus trichocarpa Torr. & Gray × deltoides Bartr. ex Marsh”

✓ located verbatim in the source · abstract, characters 241–453 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Stem girdling shifted expression of some nitrogen-responsive cDNAs.

Taxon
poplarPopulust0
Treatment
stem‐girdlede0
Outcome
shifts in expression patternse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A subset of these cDNAs also demonstrated shifts in expression patterns in stem‐girdled trees”

✓ located verbatim in the source · abstract, characters 455–548 · show in text ↑
t0

“poplar”

✓ located verbatim in the source · title, characters 75–81 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Girdling changed glutamine and asparagine pools.

Taxon
poplarPopulust0
Treatment
Stem girdlinge0
Outcome
glutamine and asparagine poolse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Stem girdling also induced changes in glutamine and asparagine pools”

✓ located verbatim in the source · abstract, characters 618–686 · show in text ↑
t0

“poplar”

✓ located verbatim in the source · title, characters 75–81 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in amino acid pools correlated with gene expression changes.

Taxon
poplarPopulust0
Gene
these genese0
Outcome
changes in expression profilese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“which were correlated with the observed changes in expression profiles for these genes”

✓ located verbatim in the source · abstract, characters 687–773 · show in text ↑
t0

“poplar”

✓ located verbatim in the source · title, characters 75–81 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Expression data suggested nitrogen availability modulates carbon and nitrogen resource partitioning.

Taxon
poplarPopulust0
Outcome
partitioning of C and N resources into metabolic fatese0
Qualifier
N availabilitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The gene expression data suggest that N availability modulates the partitioning of C and N resources into metabolic fates”

✓ located verbatim in the source · abstract, characters 970–1091 · show in text ↑
t0

“poplar”

✓ located verbatim in the source · title, characters 75–81 · show in text ↑