Paper · 2014 · PLANT PHYSIOLOGY

Suppression of Photosynthetic Gene Expression in Roots Is Required for Sustained Root Growth under Phosphate Deficiency

Jun Kang; Haopeng Yu; Caihuan Tian; et al.

10
claims
20
verbatim quotes
80
citations
2
research areas
✓
Open access · cc-by

Abstract

Plants cope with inorganic phosphate (Pi) deficiencies in their environment by adjusting their developmental programs and metabolic activities. For Arabidopsis (Arabidopsis thaliana), the developmental responses include the inhibition of primary root growth and the enhanced formation of lateral roots and root hairs. Pi deficiency also inhibits photosynthesis by suppressing the expression of photosynthetic genes. Early studies showed that photosynthetic gene expression was also suppressed in Pi-deficient roots, a nonphotosynthetic organ; however, the biological relevance of this phenomenon remains unknown. In this work, we characterized an Arabidopsis mutant, hypersensitive to Pi starvation7 (hps7), that is hypersensitive to Pi deficiency; the hypersensitivity includes an increased inhibition of root growth. HPS7 encodes a tyrosylprotein sulfotransferase. Accumulation of HPS7 proteins in root tips is enhanced by Pi deficiency. Comparative RNA sequencing analyses indicated that the expression of many photosynthetic genes is activated in roots of hps7. Under Pi deficiency, the expression of photosynthetic genes in hps7 is further increased, which leads to enhanced accumulation of chlorophyll, starch, and sucrose. Pi-deficient hps7 roots also produce a high level of reactive oxygen species. Previous research showed that the overexpression of GOLDEN-like (GLK) transcription factors in transgenic Arabidopsis activates photosynthesis in roots. The GLK overexpressing (GLK OX) lines also exhibit increased inhibition of root growth under Pi deficiency. The increased inhibition of root growth in hps7 and GLK OX lines by Pi deficiency was completely reversed by growing the plants in the dark. Based on these results, we propose that suppression of photosynthetic gene expression is required for sustained root growth under Pi deficiency.

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Claims 10

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

hps7 shows stronger root growth inhibition under phosphate deficiency.

Taxon
ArabidopsisArabidopsise0
Material
hps7e0
Outcome
inhibition of root growthe0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In this work, we characterized an Arabidopsis mutant, hypersensitive to Pi starvation7 (hps7), that is hypersensitive to Pi deficiency; the hypersensitivity includes an increased inhibition of root growth.”

✓ located verbatim in the source · abstract, characters 613–818 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HPS7 encodes a tyrosylprotein sulfotransferase.

Taxon
ArabidopsisArabidopsist0
Gene
HPS7e0
Outcome
encodes a tyrosylprotein sulfotransferasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HPS7 encodes a tyrosylprotein sulfotransferase.”

✓ located verbatim in the source · abstract, characters 819–866 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phosphate deficiency enhances HPS7 protein accumulation in root tips.

Taxon
ArabidopsisArabidopsist0
Gene
HPS7e0
Outcome
Accumulation of HPS7 proteins in root tipse0
Direction
enhancede0
Qualifier
Pi deficiencye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Accumulation of HPS7 proteins in root tips is enhanced by Pi deficiency.”

✓ located verbatim in the source · abstract, characters 867–939 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Photosynthetic gene expression is activated in hps7 roots.

Taxon
ArabidopsisArabidopsist0
Material
hps7e0
Outcome
expression of many photosynthetic genese0
Direction
activatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression of many photosynthetic genes is activated in roots of hps7.”

✓ located verbatim in the source · abstract, characters 991–1065 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Under phosphate deficiency, photosynthetic gene expression rises further in hps7 roots.

Taxon
ArabidopsisArabidopsist0
Material
hps7e0
Outcome
expression of photosynthetic genese0
Direction
increasede0
Qualifier
Pi deficiencye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Under Pi deficiency, the expression of photosynthetic genes in hps7 is further increased”

✓ located verbatim in the source · abstract, characters 1066–1154 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Under phosphate deficiency, hps7 roots accumulate more chlorophyll, starch, and sucrose.

Taxon
ArabidopsisArabidopsist0
Material
hps7e0
Outcome
accumulation of chlorophyll, starch, and sucrosee0
Direction
enhancede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Under Pi deficiency, the expression of photosynthetic genes in hps7 is further increased, which leads to enhanced accumulation of chlorophyll, starch, and sucrose.”

✓ located verbatim in the source · abstract, characters 1066–1229 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Phosphate deficient hps7 roots produce high reactive oxygen species.

Taxon
ArabidopsisArabidopsist0
Material
hps7e0
Outcome
high level of reactive oxygen speciese0
Qualifier
Pi-deficiente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Pi-deficient hps7 roots also produce a high level of reactive oxygen species.”

✓ located verbatim in the source · abstract, characters 1230–1307 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

GLK overexpressing lines have greater root growth inhibition under phosphate deficiency.

Taxon
ArabidopsisArabidopsist0
Material
GLK OXe0
Gene
GLKe0
Outcome
inhibition of root growthe0
Direction
increasede0
Qualifier
Pi deficiencye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The GLK overexpressing (GLK OX) lines also exhibit increased inhibition of root growth under Pi deficiency.”

✓ located verbatim in the source · abstract, characters 1461–1568 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Dark growth completely reversed the increased root growth inhibition in hps7 and GLK OX lines.

Taxon
ArabidopsisArabidopsist0
Material
hps7 and GLK OX linese0
Treatment
growing the plants in the darke0
Outcome
increased inhibition of root growthe0
Direction
completely reversede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The increased inhibition of root growth in hps7 and GLK OX lines by Pi deficiency was completely reversed by growing the plants in the dark.”

✓ located verbatim in the source · abstract, characters 1569–1709 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose that suppressing photosynthetic genes sustains root growth under phosphate deficiency.

Taxon
ArabidopsisArabidopsist0
Outcome
sustained root growthe0
Qualifier
suppression of photosynthetic gene expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“suppression of photosynthetic gene expression is required for sustained root growth under Pi deficiency.”

✓ located verbatim in the source · abstract, characters 1750–1854 · show in text ↑
t0

“For Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 144–182 · show in text ↑

light · disease · ArabidopsisPositive and negative results

21 papers: 10 positive, 11 negative or no effect

9 papers in the same direction as this paper · 11 in the opposite direction

  1. negative
  2. negative
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.