Paper · 2005 · Journal of Experimental Botany

Systemic signalling of environmental cues in Arabidopsis leaves

S. A. Coupe; B. G. Palmer; J. A. Lake; et al.

7
claims
12
verbatim quotes
161
citations
2
research areas
✓
Open access

Abstract

Light intensity and atmospheric CO2 partial pressure are two environmental signals known to regulate stomatal numbers. It has previously been shown that if a mature Arabidopsis leaf is supplied with either elevated CO2 (750 ppm instead of ambient at 370 ppm) or reduced light levels (50 micromol m-2 s-1 instead of 250 micromol m-2 s-1), the young, developing leaves that are not receiving the treatment grow with a stomatal density as if they were exposed to the treatment. But the signal(s) that it is believed is generated in the mature leaves and transmitted to developing leaves are largely unknown. Photosynthetic rates of treated, mature Arabidopsis leaves increased in elevated CO2 and decreased when shaded, as would be expected. Similarly, the levels of sugars (glucose, fructose, and sucrose) in the treated mature leaves increased in elevated CO2 and decreased with shade treatment. The levels of sugar in developing leaves were also measured and it was found that they mirrored this result even though they were not receiving the shade or elevated CO2 treatment. To investigate the effect of these treatments on global gene expression patterns, transcriptomics analysis was carried out using Affymetrix, 22K, and ATH1 arrays. Total RNA was extracted from the developing leaves after the mature leaves had received either the ambient control treatment, the elevated CO2 treatment, or the shade treatment, or both elevated CO2 and shade treatments for 2, 4, 12, 24, 48, or 96 h. The experiment was replicated four times. Two other experiments were also conducted, one to compare and contrast gene expression in response to plants grown at elevated CO2 and the other to look at the effect of these treatments on the mature leaf. The data were analysed and 915 genes from the untreated, signalled leaves were identified as having expression levels affected by the shade treatment. These genes were then compared with those whose transcript abundance was affected by the shade treatment in the mature treated leaves (1181 genes) and with 220 putative 'stomatal signalling' genes previously identified from studies of the yoda mutant. The results of these experiments and how they relate to environmental signalling are discussed, as well as possible mechanisms for systemic signalling.

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Claims 7

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Elevated CO2 increased photosynthesis in treated mature leaves.

Taxon
ArabidopsisArabidopsise0
Organ / stage
mature Arabidopsis leavese0
Treatment
elevated CO2e0
Outcome
Photosynthetic ratese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Photosynthetic rates of treated, mature Arabidopsis leaves increased in elevated CO2”

✓ located verbatim in the source · abstract, characters 605–689 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Shade decreased photosynthesis in treated mature leaves.

Taxon
ArabidopsisArabidopsise0
Organ / stage
mature Arabidopsis leavese0
Treatment
shadede0
Outcome
Photosynthetic ratese0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Photosynthetic rates of treated, mature Arabidopsis leaves increased in elevated CO2 and decreased when shaded”

✓ located verbatim in the source · abstract, characters 605–715 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Elevated CO2 increased glucose, fructose and sucrose in mature leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
mature leavese0
Treatment
elevated CO2e0
Outcome
levels of sugars (glucose, fructose, and sucrose)e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the levels of sugars (glucose, fructose, and sucrose) in the treated mature leaves increased in elevated CO2”

✓ located verbatim in the source · abstract, characters 750–858 · show in text ↑
t0

“Arabidopsis leaves”

✓ located verbatim in the source · title, characters 45–63 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Shade decreased glucose, fructose and sucrose in mature leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
mature leavese0
Treatment
shade treatmente0
Outcome
levels of sugars (glucose, fructose, and sucrose)e0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the levels of sugars (glucose, fructose, and sucrose) in the treated mature leaves increased in elevated CO2 and decreased with shade treatment”

✓ located verbatim in the source · abstract, characters 750–893 · show in text ↑
t0

“Arabidopsis leaves”

✓ located verbatim in the source · title, characters 45–63 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Developing leaf sugars mirrored mature-leaf sugar responses despite no direct treatment.

Taxon
ArabidopsisArabidopsist0
Outcome
levels of sugar in developing leavese0
Direction
mirrorede0
Qualifier
not receiving the shade or elevated CO2 treatmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The levels of sugar in developing leaves were also measured and it was found that they mirrored this result even though they were not receiving the shade or elevated CO2 treatment.”

✓ located verbatim in the source · abstract, characters 895–1075 · show in text ↑
t0

“Arabidopsis leaves”

✓ located verbatim in the source · title, characters 45–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Shade treatment affected expression of 915 genes in untreated developing leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
untreated, signalled leavese0
Treatment
shade treatmente0
Outcome
expression levelse0
Value
915 genese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“915 genes from the untreated, signalled leaves were identified as having expression levels affected by the shade treatment.”

✓ located verbatim in the source · abstract, characters 1766–1889 · show in text ↑
t0

“Arabidopsis leaves”

✓ located verbatim in the source · title, characters 45–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Shade treatment affected transcript abundance of 1181 genes in mature treated leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
mature treated leavese0
Treatment
shade treatmente0
Outcome
transcript abundancee0
Value
1181 genese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“transcript abundance was affected by the shade treatment in the mature treated leaves (1181 genes)”

✓ located verbatim in the source · abstract, characters 1938–2036 · show in text ↑
t0

“Arabidopsis leaves”

✓ located verbatim in the source · title, characters 45–63 · show in text ↑

co2 · physiology: photosynthesis · ArabidopsisPositive and negative results

6 papers: 4 positive, 2 negative or no effect

3 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

2 papers more in this group

See all 6 papers →

co2 · molecular: metabolites · ArabidopsisResults agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.