Paper · 2012 · Journal of Experimental Botany

The soluble proteome of tobacco Bright Yellow-2 cells undergoing H2O2-induced programmed cell death

C. Vannini; M. Marsoni; C. Cantara; et al.

9
claims
19
verbatim quotes
17
citations
2
research areas
✓
Open access

Abstract

Plant programmed cell death (PCD) is a genetically controlled process that plays an important role in development and stress responses. Reactive oxygen species (ROS) are key inducers of PCD. The addition of 50 mM H₂O₂ to tobacco Bright Yellow-2 (TBY-2) cell cultures induces PCD. A comparative proteomic analysis of TBY-2 cells treated with 50 mM H₂O₂ for 30 min and 3 h was performed. The results showed early down-regulation of several elements in the cellular redox hub and inhibition of the protein repair-degradation system. The expression patterns of proteins involved in the homeostatic response, in particular those associated with metabolism, were consistently altered. The changes in abundance of several cytoskeleton proteins confirmed the active role of the cytoskeleton in PCD signalling. Cells undergoing H₂O₂-induced PCD fail to cope with oxidative stress. The antioxidant defence system and the anti-PCD signalling cascades are inhibited. This promotes a genetically programmed cell suicide pathway. Fifteen differentially expressed proteins showed an expression pattern similar to that previously observed in TBY-2 cells undergoing heat shock-induced PCD. The possibility that these proteins are part of a core complex required for PCD induction is discussed.

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Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Hydrogen peroxide induced programmed cell death in tobacco Bright Yellow-2 cultures.

Material
Bright Yellow-2 (TBY-2)e0
Treatment
50 mM H₂O₂e0
Outcome
PCDe0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The addition of 50 mM H₂O₂ to tobacco Bright Yellow-2 (TBY-2) cell cultures induces PCD.”

✓ located verbatim in the source · abstract, characters 191–279 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Hydrogen peroxide treatment caused early down-regulation of several redox hub elements.

Material
Bright Yellow-2t0
Treatment
50 mM H₂O₂e1
Outcome
several elements in the cellular redox hube0
Direction
down-regulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The results showed early down-regulation of several elements in the cellular redox hub”

✓ located verbatim in the source · abstract, characters 386–472 · show in text ↑
e1

“TBY-2 cells treated with 50 mM H₂O₂ for 30 min and 3 h”

✓ located verbatim in the source · abstract, characters 316–370 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Hydrogen peroxide treatment inhibited the protein repair-degradation system.

Treatment
50 mM H₂O₂e1
Outcome
protein repair-degradation systeme0
Direction
inhibitione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“inhibition of the protein repair-degradation system”

✓ located verbatim in the source · abstract, characters 477–528 · show in text ↑
e1

“TBY-2 cells treated with 50 mM H₂O₂ for 30 min and 3 h”

✓ located verbatim in the source · abstract, characters 316–370 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Homeostatic response protein expression patterns, particularly metabolism-related proteins, were altered.

Outcome
expression patterns of proteins involved in the homeostatic responsee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The expression patterns of proteins involved in the homeostatic response, in particular those associated with metabolism, were consistently altered.”

✓ located verbatim in the source · abstract, characters 530–678 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cytoskeleton protein abundance changed during programmed cell death.

Outcome
abundance of several cytoskeleton proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The changes in abundance of several cytoskeleton proteins confirmed the active role of the cytoskeleton in PCD signalling.”

✓ located verbatim in the source · abstract, characters 679–801 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Tobacco cells undergoing peroxide-induced programmed cell death failed to cope with oxidative stress.

Outcome
fail to cope with oxidative stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Cells undergoing H₂O₂-induced PCD fail to cope with oxidative stress.”

✓ located verbatim in the source · abstract, characters 802–871 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The antioxidant defence system was inhibited during peroxide-induced programmed cell death.

Outcome
antioxidant defence systeme0
Direction
inhibitede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The antioxidant defence system and the anti-PCD signalling cascades are inhibited.”

✓ located verbatim in the source · abstract, characters 872–954 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Anti-PCD signalling cascades were inhibited during peroxide-induced programmed cell death.

Outcome
anti-PCD signalling cascadese0
Direction
inhibitede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The antioxidant defence system and the anti-PCD signalling cascades are inhibited.”

✓ located verbatim in the source · abstract, characters 872–954 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Fifteen proteins had differential expression resembling the pattern previously seen in heat shock induced cell death.

Outcome
differentially expressed proteinse0
Value
Fifteene0
Comparator
TBY-2 cells undergoing heat shock-induced PCDe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Fifteen differentially expressed proteins showed an expression pattern similar to that previously observed in TBY-2 cells undergoing heat shock-induced PCD.”

✓ located verbatim in the source · abstract, characters 1016–1172 · show in text ↑
t0

“tobacco Bright Yellow-2 cells”

✓ located verbatim in the source · title, characters 24–53 · show in text ↑

hydrogen peroxide · cytology · Nicotiana tabacum (tobacco)Positive and negative results

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.