Paper · 2008 · Molecules and Cells

Physiological Function of NbRanBP1 in Nicotiana benthamiana

Hui-Kyung Cho; Jong-A Park; Hyun-Sook Pai

8
claims
16
verbatim quotes
24
citations
4
research areas
✓
Open access · cc-by-nc-nd

Abstract

This study addresses the physiological functions of the Ran-binding protein homolog NbRanBP1 in Nicotiana benthamiana. Virus-induced gene silencing (VIGS) of NbRanBP1 caused stunted growth, leaf yellowing, and abnormal leaf morphology. The NbRanBP1 gene was constitutively expressed in diverse tissues and an NbRanBP1:GFP fusion protein was primarily localized to the nuclear rim and the cytosol. BiFC analysis revealed in vivo interaction between NbRanBP1 and NbRan1 in the nuclear envelope and the cytosol. Depletion of NbRanBP1 or NbRan1 reduced nuclear accumulation of a NbBTF3:GFP marker protein. In the later stages of development, NbRanBP1 VIGS plants showed stress responses such as reduced mitochondrial membrane potential, excessive production of reactive oxygen species, and induction of defense-related genes. The molecular role of RanBP1 in plants is discussed in comparison with RanBP1 function in yeast and mammals.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virus-induced silencing of NbRanBP1 caused stunted growth, leaf yellowing and abnormal leaf morphology.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
Virus-induced gene silencing (VIGS) of NbRanBP1e0
Gene
NbRanBP1e0
Outcome
stunted growth, leaf yellowing, and abnormal leaf morphologye0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e0

“Virus-induced gene silencing (VIGS) of NbRanBP1 caused stunted growth, leaf yellowing, and abnormal leaf morphology”

✓ located verbatim in the source · abstract, characters 119–234 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NbRanBP1 is constitutively expressed in diverse tissues.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
diverse tissuese1
Gene
NbRanBP1e1
Outcome
constitutively expressede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e1

“The NbRanBP1 gene was constitutively expressed in diverse tissues”

✓ located verbatim in the source · abstract, characters 236–301 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The NbRanBP1:GFP fusion protein is primarily localized to the nuclear rim and the cytosol.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Gene
NbRanBP1:GFPe2
Outcome
primarily localized to the nuclear rim and the cytosole2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e2

“an NbRanBP1:GFP fusion protein was primarily localized to the nuclear rim and the cytosol”

✓ located verbatim in the source · abstract, characters 306–395 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NbRanBP1 interacts with NbRan1 in vivo in the nuclear envelope and the cytosol.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Gene
NbRanBP1e3
Outcome
in vivo interactione3
Qualifier
NbRan1 in the nuclear envelope and the cytosole3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e3

“BiFC analysis revealed in vivo interaction between NbRanBP1 and NbRan1 in the nuclear envelope and the cytosol”

✓ located verbatim in the source · abstract, characters 397–507 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Depletion of NbRanBP1 or NbRan1 reduced nuclear accumulation of a NbBTF3:GFP marker protein.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
Depletion of NbRanBP1 or NbRan1e4
Gene
NbBTF3:GFPe4
Outcome
nuclear accumulation of a NbBTF3:GFP marker proteine4
Direction
reducede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e4

“Depletion of NbRanBP1 or NbRan1 reduced nuclear accumulation of a NbBTF3:GFP marker protein”

✓ located verbatim in the source · abstract, characters 509–600 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In later stages of development, NbRanBP1 VIGS plants show reduced mitochondrial membrane potential.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
later stages of developmente5
Treatment
NbRanBP1 VIGSe5
Outcome
mitochondrial membrane potentiale5
Direction
reducede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e5

“In the later stages of development, NbRanBP1 VIGS plants showed stress responses such as reduced mitochondrial membrane potential, excessive production of reactive oxygen species, and induction of defense-related genes”

✓ located verbatim in the source · abstract, characters 602–820 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In later stages of development, NbRanBP1 VIGS plants show excessive production of reactive oxygen species.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
later stages of developmente5
Treatment
NbRanBP1 VIGSe5
Outcome
reactive oxygen speciese5
Direction
excessive productione5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e5

“In the later stages of development, NbRanBP1 VIGS plants showed stress responses such as reduced mitochondrial membrane potential, excessive production of reactive oxygen species, and induction of defense-related genes”

✓ located verbatim in the source · abstract, characters 602–820 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In later stages of development, NbRanBP1 VIGS plants show induction of defense-related genes.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
later stages of developmente5
Treatment
NbRanBP1 VIGSe5
Outcome
defense-related genese5
Direction
inductione5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 38–59 · show in text ↑
e5

“In the later stages of development, NbRanBP1 VIGS plants showed stress responses such as reduced mitochondrial membrane potential, excessive production of reactive oxygen species, and induction of defense-related genes”

✓ located verbatim in the source · abstract, characters 602–820 · show in text ↑

loss of function · physiology: oxidative · Nicotiana benthamianaPositive and negative results

16 papers: 6 positive, 10 negative or no effect

9 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

12 papers more in this group

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loss of function · molecular: expression · Nicotiana benthamianaPositive and negative results

43 papers: 19 positive, 24 negative or no effect

23 papers in the same direction as this paper · 19 in the opposite direction

  1. positive
  2. positive
  3. positive

39 papers more in this group

See all 43 papers →

loss of function · disease · Nicotiana benthamianaPositive and negative results

143 papers: 50 positive, 93 negative or no effect

92 papers in the same direction as this paper · 50 in the opposite direction

  1. negative
  2. positive
  3. positive

139 papers more in this group

See all 143 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.