Paper · 2016 · Plant Biotechnology Journal

Reduced paucimannosidic N‐glycan formation by suppression of a specific β‐hexosaminidase from Nicotiana benthamiana

Yun‐Ji Shin; Alexandra Castilho; Martina Dicker; et al.

6
claims
9
verbatim quotes
57
citations
2
research areas
✓
Open access · cc-by

Abstract

Plants are attractive hosts for the production of recombinant glycoproteins for therapeutic use. Recent advances in glyco-engineering facilitate the elimination of nonmammalian-type glycosylation and introduction of missing pathways for customized N-glycan formation. However, some therapeutically relevant recombinant glycoproteins exhibit unwanted truncated (paucimannosidic) N-glycans that lack GlcNAc residues at the nonreducing terminal end. These paucimannosidic N-glycans increase product heterogeneity and may affect the biological function of the recombinant drugs. Here, we identified two enzymes, β-hexosaminidases (HEXOs) that account for the formation of paucimannosidic N-glycans in Nicotiana benthamiana, a widely used expression host for recombinant proteins. Subcellular localization studies showed that HEXO1 is a vacuolar protein and HEXO3 is mainly located at the plasma membrane in N. benthamiana leaf epidermal cells. Both enzymes are functional and can complement the corresponding HEXO-deficient Arabidopsis thaliana mutants. In planta expression of HEXO3 demonstrated that core α1,3-fucose enhances the trimming of GlcNAc residues from the Fc domain of human IgG. Finally, using RNA interference, we show that suppression of HEXO3 expression can be applied to increase the amounts of complex N-glycans on plant-produced human α1-antitrypsin.

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two β-hexosaminidases account for paucimannosidic N-glycan formation in Nicotiana benthamiana.

Taxon
Nicotiana benthamianaNicotiana benthamianae0
Gene
β-hexosaminidases (HEXOs)e0
Outcome
formation of paucimannosidic N-glycanse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified two enzymes, β-hexosaminidases (HEXOs) that account for the formation of paucimannosidic N-glycans in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 581–718 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HEXO1 localized to the vacuole.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Gene
HEXO1e0
Outcome
vacuolar proteine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HEXO1 is a vacuolar protein”

✓ located verbatim in the source · abstract, characters 821–848 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 94–115 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HEXO3 localized mainly to the plasma membrane in leaf epidermal cells.

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leaf epidermal cellse0
Gene
HEXO3e0
Outcome
mainly located at the plasma membranee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HEXO3 is mainly located at the plasma membrane in N. benthamiana leaf epidermal cells”

✓ located verbatim in the source · abstract, characters 853–938 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Both enzymes complemented corresponding HEXO-deficient Arabidopsis mutants.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Both enzymese0
Outcome
complemente0
Comparator
HEXO-deficient Arabidopsis thaliana mutantse0

Not reportedGeneDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both enzymes are functional and can complement the corresponding HEXO-deficient Arabidopsis thaliana mutants.”

✓ located verbatim in the source · abstract, characters 940–1049 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Core α1,3-fucose enhanced GlcNAc trimming from human IgG Fc in planta.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Gene
HEXO3e0
Compound
core α1,3-fucosee0
Outcome
trimming of GlcNAc residues from the Fc domain of human IgGe0
Direction
enhancese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In planta expression of HEXO3 demonstrated that core α1,3-fucose enhances the trimming of GlcNAc residues from the Fc domain of human IgG.”

✓ located verbatim in the source · abstract, characters 1050–1188 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 94–115 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

RNA interference suppression of HEXO3 increased complex N-glycans on plant-produced human α1-antitrypsin.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
suppression of HEXO3 expressione0
Gene
HEXO3e0
Outcome
amounts of complex N-glycans on plant-produced human α1-antitrypsine0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“using RNA interference, we show that suppression of HEXO3 expression can be applied to increase the amounts of complex N-glycans on plant-produced human α1-antitrypsin”

✓ located verbatim in the source · abstract, characters 1198–1365 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 94–115 · show in text ↑

loss of function · molecular: metabolites · Nicotiana benthamianaPositive and negative results

35 papers: 10 positive, 25 negative or no effect

9 papers in the same direction as this paper · 25 in the opposite direction

  1. negative
  2. negative
  3. no effect

31 papers more in this group

See all 35 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.