Paper · 2017 · Plant and Cell Physiology

Three cis-Regulatory Motifs, AuxRE, MYCRS1 and MYCRS2, are Required for Modulating the Auxin- and Mycorrhiza-Responsive Expression of a Tomato GH3 Gene

Xiao Chen; Dehua Liao; Xiaofeng Yang; et al.

12
claims
15
verbatim quotes
13
citations
3
research areas
✓
Open access

Abstract

Auxin is well known to be a key regulator that acts in almost all physiological processes during plant growth, and in interactions between plants and microbes. However, to date, the regulatory mechanisms underlying auxin-mediated plant-arbuscular mycorrhizal (AM) fungi symbiosis have not been well deciphered. Previously we identified a GH3 gene, SlGH3.4, strongly responsive to both auxin induction and mycorrhizal symbiosis. Here, we reported a refined dissection of the SlGH3.4 promoter activity using the β-glucuronidase (GUS) reporter. The SlGH3.4 promoter could drive GUS expression strongly in mycorrhizal roots of soybean and rice plants, and in IAA-treated soybean roots, but not in IAA-treated rice roots. A promoter deletion assay revealed three cis-acting motifs, i.e. the auxin-responsive element, AuxRE, and two newly identified motifs named MYCRS1 and MYCRS2, involved in the activation of auxin- and AM-mediated expression of SlGH3.4. Deletion of the AuxRE from the SlGH3.4 promoter caused almost complete abolition of GUS staining in response to external IAA induction. Seven repeats of AuxRE fused to the Cauliflower mosaic virus (CaMV) 35S minimal promoter could direct GUS expression in both IAA-treated and AM fungal-colonized roots of tobacco plants. Four repeats of MYCRS1 or MYCRS2 fused to the CaMV35S minimal promoter was sufficient to drive GUS expression in arbuscule-containing cells, but not in IAA-treated tobacco roots. In summary, our results offer new insights into the molecular mechanisms underlying the potential cross-talk between the auxin and the AM regulatory pathways in modulating the expression of AM-responsive GH3 genes in diverse mycorrhizal plants.

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Claims 12

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The SlGH3.4 promoter drove strong GUS expression in mycorrhizal soybean roots.

Taxon
soybeanGlycine maxe0
Organ / stage
rootse0
Gene
SlGH3.4e0
Outcome
GUS expressione0
Direction
stronglye0

Not reportedInteractor

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Tomato GH3 Gene”

✓ located verbatim in the source · title, characters 136–151 · show in text ↑
e0

“The SlGH3.4 promoter could drive GUS expression strongly in mycorrhizal roots of soybean and rice plants”

✓ located verbatim in the source · abstract, characters 542–646 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The SlGH3.4 promoter drove strong GUS expression in mycorrhizal rice roots.

Organ / stage
rootse0
Gene
SlGH3.4e0
Outcome
GUS expressione0
Direction
stronglye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The SlGH3.4 promoter could drive GUS expression strongly in mycorrhizal roots of soybean and rice plants”

✓ located verbatim in the source · abstract, characters 542–646 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The SlGH3.4 promoter drove GUS expression in IAA treated soybean roots.

Taxon
soybeanGlycine maxe0
Organ / stage
rootse0
Treatment
IAA-treatede0
Outcome
IAA-treated soybean rootse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“in IAA-treated soybean roots, but not in IAA-treated rice roots.”

✓ located verbatim in the source · abstract, characters 652–716 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The SlGH3.4 promoter did not drive GUS expression in IAA treated rice roots.

Organ / stage
rootse0
Treatment
IAA-treatede0
Outcome
GUS expressione0
Direction
but note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The SlGH3.4 promoter could drive GUS expression strongly in mycorrhizal roots of soybean and rice plants, and in IAA-treated soybean roots, but not in IAA-treated rice roots.”

✓ located verbatim in the source · abstract, characters 542–716 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

AuxRE, MYCRS1 and MYCRS2 were implicated in auxin and AM mediated SlGH3.4 activation.

Gene
SlGH3.4e0
Outcome
activation of auxin- and AM-mediated expression of SlGH3.4e0
Qualifier
AuxRE, and two newly identified motifs named MYCRS1 and MYCRS2e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato GH3 Gene”

✓ located verbatim in the source · title, characters 136–151 · show in text ↑
e0

“three cis-acting motifs, i.e. the auxin-responsive element, AuxRE, and two newly identified motifs named MYCRS1 and MYCRS2, involved in the activation of auxin- and AM-mediated expression of SlGH3.4.”

✓ located verbatim in the source · abstract, characters 752–951 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Deleting AuxRE almost abolished IAA induced GUS staining.

Treatment
Deletion of the AuxREe0
Gene
SlGH3.4e0
Outcome
GUS staininge0
Direction
almost complete abolitione0
Qualifier
external IAA inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Tomato GH3 Gene”

✓ located verbatim in the source · title, characters 136–151 · show in text ↑
e0

“Deletion of the AuxRE from the SlGH3.4 promoter caused almost complete abolition of GUS staining in response to external IAA induction.”

✓ located verbatim in the source · abstract, characters 952–1087 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seven AuxRE repeats drove GUS expression in IAA treated tobacco roots.

Organ / stage
rootse0
Treatment
Seven repeats of AuxREe0
Outcome
GUS expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Seven repeats of AuxRE fused to the Cauliflower mosaic virus (CaMV) 35S minimal promoter could direct GUS expression in both IAA-treated and AM fungal-colonized roots of tobacco plants.”

✓ located verbatim in the source · abstract, characters 1088–1273 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seven AuxRE repeats drove GUS expression in AM fungal colonized tobacco roots.

Organ / stage
rootse0
Treatment
Seven repeats of AuxREe0
Interactor
AM fungale0symbiont
Outcome
GUS expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Seven repeats of AuxRE fused to the Cauliflower mosaic virus (CaMV) 35S minimal promoter could direct GUS expression in both IAA-treated and AM fungal-colonized roots of tobacco plants.”

✓ located verbatim in the source · abstract, characters 1088–1273 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Four MYCRS1 repeats drove GUS expression in arbuscule containing cells.

Organ / stage
arbuscule-containing cellse0
Treatment
Four repeats of MYCRS1e0
Outcome
GUS expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Four repeats of MYCRS1 or MYCRS2 fused to the CaMV35S minimal promoter was sufficient to drive GUS expression in arbuscule-containing cells, but not in IAA-treated tobacco roots.”

✓ located verbatim in the source · abstract, characters 1274–1452 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Four MYCRS2 repeats drove GUS expression in arbuscule containing cells.

Organ / stage
arbuscule-containing cellse0
Treatment
MYCRS2e0
Outcome
GUS expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Four repeats of MYCRS1 or MYCRS2 fused to the CaMV35S minimal promoter was sufficient to drive GUS expression in arbuscule-containing cells, but not in IAA-treated tobacco roots.”

✓ located verbatim in the source · abstract, characters 1274–1452 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Four MYCRS1 repeats did not drive GUS expression in IAA treated tobacco roots.

Organ / stage
rootse0
Treatment
Four repeats of MYCRS1e0
Outcome
GUS expressione0
Direction
but note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Four repeats of MYCRS1 or MYCRS2 fused to the CaMV35S minimal promoter was sufficient to drive GUS expression in arbuscule-containing cells, but not in IAA-treated tobacco roots.”

✓ located verbatim in the source · abstract, characters 1274–1452 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Four MYCRS2 repeats did not drive GUS expression in IAA treated tobacco roots.

Organ / stage
rootse0
Treatment
MYCRS2e0
Outcome
GUS expressione0
Direction
but note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Four repeats of MYCRS1 or MYCRS2 fused to the CaMV35S minimal promoter was sufficient to drive GUS expression in arbuscule-containing cells, but not in IAA-treated tobacco roots.”

✓ located verbatim in the source · abstract, characters 1274–1452 · show in text ↑

indole-3-acetic acid · molecular: metabolites · Glycine max (soybean)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

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indole-3-acetic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

14 papers: 12 positive, 2 negative or no effect

1 paper in the same direction as this paper · 12 in the opposite direction

  1. positive
  2. positive
  3. positive

10 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.