Paper · 2020 · Plant Pathology

Transcriptomic analysis reveals root metabolic alteration and induction of huanglongbing resistance by sulphonamide antibiotics in huanglongbing‐affected citrus plants

Chuanyu Yang; Charles A. Powell; Yongping Duan; et al.

8
claims
11
verbatim quotes
35
citations
4
research areas
✓
Open access · cc-by

Abstract

Abstract Huanglongbing (HLB) is a devastating disease that affects the entire citrus plant, including the root system. Previous studies have shown that sulphonamide antibiotics can suppress titres of the pathogen that causes HLB, ‘ Candidatus Liberibacter asiaticus’ (CLas), and affect root morphology in the plant through unknown mechanisms. To better understand the response of CLas‐infected roots to sulphonamide antibiotics, hydroponic cultures of CLas‐infected citrus roots were treated with sulfadimethoxine sodium (SDX), indole butyric acid (IBA), or water for 60 days to evaluate root metabolism and resistance against CLas via transcriptomic analysis. This study indicated that SDX and IBA treatments increased active root surface area in HLB‐affected citrus, which may be due to root hair and lateral root growth. CLas titres in HLB‐affected citrus roots treated with SDX were lower than those of IBA and control treatments. Function categorization indicated that plant hormone signal transduction and plant–pathogen interaction were the most markedly enriched pathways in the HLB‐affected citrus root after SDX treatment. The expression of genes involved in biosynthesis of auxin and ethylene, which are related to root hair and lateral root growth, were up‐regulated by SDX. Moreover, SDX also induced genes related to the metabolism of jasmonates, brassinosteroids, reactive oxygen species, and secondary metabolites, which are beneficial for resistance against HLB. In conclusion, we propose a model for SDX in regulating metabolic pathways in the root and resistance against CLas in HLB‐affected citrus root, which is beneficial for recovering an HLB‐affected citrus root system and combating CLas.

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Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SDX increased active root surface area in HLB-affected citrus relative to the untreated comparison.

Taxon
citrusCitruse1
Treatment
SDXe1
Outcome
active root surface areae1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“SDX and IBA treatments increased active root surface area in HLB‐affected citrus”

✓ located verbatim in the source · abstract, characters 687–767 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBA increased active root surface area in HLB-affected citrus.

Taxon
citrusCitruse1
Treatment
IBAe1
Outcome
active root surface areae1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“SDX and IBA treatments increased active root surface area in HLB‐affected citrus”

✓ located verbatim in the source · abstract, characters 687–767 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SDX lowered CLas titres in HLB-affected citrus roots compared with IBA and control treatments.

Taxon
citrusCitruse2
Organ / stage
rootse2
Treatment
SDXe2
Interactor
CLase2pathogen
Outcome
CLas titrese2
Direction
lowere2
Comparator
IBA and control treatmentse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“CLas titres in HLB‐affected citrus roots treated with SDX were lower than those of IBA and control treatments”

✓ located verbatim in the source · abstract, characters 824–933 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

After SDX treatment, plant hormone signal transduction and plant-pathogen interaction were the most markedly enriched pathways in HLB-affected citrus roots.

Taxon
citrusCitruse3
Organ / stage
roote3
Treatment
SDXe3
Outcome
plant hormone signal transduction and plant–pathogen interactione3
Direction
most markedly enrichede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“Function categorization indicated that plant hormone signal transduction and plant–pathogen interaction were the most markedly enriched pathways in the HLB‐affected citrus root after SDX treatment”

✓ located verbatim in the source · abstract, characters 935–1131 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SDX up-regulated genes involved in biosynthesis of auxin and ethylene in HLB-affected citrus roots.

Taxon
citrusCitruse3
Treatment
SDXe4
Outcome
expression of genes involved in biosynthesis of auxin and ethylenee4
Direction
up‐regulatede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“The expression of genes involved in biosynthesis of auxin and ethylene, which are related to root hair and lateral root growth, were up‐regulated by SDX”

✓ located verbatim in the source · abstract, characters 1133–1285 · show in text ↑
e3

“Function categorization indicated that plant hormone signal transduction and plant–pathogen interaction were the most markedly enriched pathways in the HLB‐affected citrus root after SDX treatment”

✓ located verbatim in the source · abstract, characters 935–1131 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SDX induced genes related to the metabolism of jasmonates, brassinosteroids and reactive oxygen species in HLB-affected citrus.

Taxon
citrusCitruse3
Treatment
SDXe5
Outcome
metabolism of jasmonates, brassinosteroids, reactive oxygen speciese5
Direction
inducede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“SDX also induced genes related to the metabolism of jasmonates, brassinosteroids, reactive oxygen species, and secondary metabolites, which are beneficial for resistance against HLB”

✓ located verbatim in the source · abstract, characters 1297–1478 · show in text ↑
e3

“Function categorization indicated that plant hormone signal transduction and plant–pathogen interaction were the most markedly enriched pathways in the HLB‐affected citrus root after SDX treatment”

✓ located verbatim in the source · abstract, characters 935–1131 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SDX induced genes related to the metabolism of secondary metabolites in HLB-affected citrus.

Taxon
citrusCitruse3
Treatment
SDXe5
Outcome
secondary metabolitese5
Direction
inducede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“SDX also induced genes related to the metabolism of jasmonates, brassinosteroids, reactive oxygen species, and secondary metabolites, which are beneficial for resistance against HLB”

✓ located verbatim in the source · abstract, characters 1297–1478 · show in text ↑
e3

“Function categorization indicated that plant hormone signal transduction and plant–pathogen interaction were the most markedly enriched pathways in the HLB‐affected citrus root after SDX treatment”

✓ located verbatim in the source · abstract, characters 935–1131 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose that SDX regulates root metabolic pathways and resistance against CLas in HLB-affected citrus roots.

Taxon
citrusCitruse6
Treatment
SDXe6
Interactor
CLase6pathogen
Outcome
resistance against CLase6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e6

“we propose a model for SDX in regulating metabolic pathways in the root and resistance against CLas in HLB‐affected citrus root”

✓ located verbatim in the source · abstract, characters 1495–1622 · show in text ↑

indole-3-butyric acid · growth · CitrusPositive and negative results

6 papers: 5 positive, 1 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.