Paper · 2020 · Plant Cell & Environment

Comprehensive transcriptome and proteome analyses reveal a novel sodium chloride responsive gene network in maize seed tissues during germination

Mo‐Xian Chen; Chong‐Chong Lu; Peng‐Cheng Sun; et al.

6
claims
11
verbatim quotes
37
citations
2
research areas
—
Not open access

Abstract

Germination is a plant developmental process by which radicle of mature seeds start to penetrate surrounding barriers for seedling establishment and multiple environmental factors have been shown to affect it. Little is known how high salinity affects seed germination of C4 plant, Zea mays. Preliminary germination assay suggested that isolated embryo alone was able to germinate under 200 mM NaCl treatment, whereas the intact seeds were highly repressed. We hypothesized that maize endosperm may function in perception and transduction of salt signal to surrounding tissues such as embryo, showing a completely different response to that in Arabidopsis. Since salt response involves ABA, we analysed in vivo ABA distribution and quantity and the result demonstrated that ABA level in isolated embryo under NaCl treatment failed to increase in comparison with the water control, suggesting that the elevation of ABA level is an endosperm dependent process. Subsequently, by using advanced profiling techniques such as RNA sequencing and SWATH-MS-based quantitative proteomics, we found substantial differences in post-transcriptional and translational changes between salt-treated embryo and endosperm. In summary, our results indicate that these regulatory mechanisms, such as alternative splicing, are likely to mediate early responses to salt stress during maize seed germination.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Isolated embryos alone were able to germinate under 200 mM NaCl.

Taxon
Zea maysZea mayse4
Organ / stage
isolated embryoe0
Treatment
200 mM NaCl treatmente0
Outcome
germinatee0
Comparator
intact seedse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“isolated embryo alone was able to germinate under 200 mM NaCl treatment, whereas the intact seeds were highly repressed”

✓ located verbatim in the source · abstract, characters 337–456 · show in text ↑
e4

“Little is known how high salinity affects seed germination of C4 plant, Zea mays”

✓ located verbatim in the source · abstract, characters 210–290 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Intact seeds were highly repressed in germination under 200 mM NaCl relative to isolated embryos.

Taxon
Zea maysZea mayse4
Organ / stage
intact seedse0
Treatment
200 mM NaCl treatmente0
Outcome
germinatee0
Direction
highly repressede0
Comparator
isolated embryo alonee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“isolated embryo alone was able to germinate under 200 mM NaCl treatment, whereas the intact seeds were highly repressed”

✓ located verbatim in the source · abstract, characters 337–456 · show in text ↑
e4

“Little is known how high salinity affects seed germination of C4 plant, Zea mays”

✓ located verbatim in the source · abstract, characters 210–290 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

ABA level in isolated embryos under NaCl treatment did not increase compared with the water control.

Taxon
Zea maysZea mayse4
Organ / stage
isolated embryoe1
Treatment
NaCl treatmente1
Outcome
ABA levele1
Direction
failed to increasee1
Comparator
water controle1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“the result demonstrated that ABA level in isolated embryo under NaCl treatment failed to increase in comparison with the water control, suggesting that the elevation of ABA level is an endosperm dependent process”

✓ located verbatim in the source · abstract, characters 745–957 · show in text ↑
e4

“Little is known how high salinity affects seed germination of C4 plant, Zea mays”

✓ located verbatim in the source · abstract, characters 210–290 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The elevation of ABA level is suggested to be an endosperm-dependent process.

Taxon
Zea maysZea mayse4
Organ / stage
endosperme1
Outcome
the elevation of ABA levele1
Qualifier
endosperm dependent processe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“the result demonstrated that ABA level in isolated embryo under NaCl treatment failed to increase in comparison with the water control, suggesting that the elevation of ABA level is an endosperm dependent process”

✓ located verbatim in the source · abstract, characters 745–957 · show in text ↑
e4

“Little is known how high salinity affects seed germination of C4 plant, Zea mays”

✓ located verbatim in the source · abstract, characters 210–290 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Salt-treated embryo and endosperm differed substantially in post-transcriptional and translational changes.

Taxon
Zea maysZea mayse4
Organ / stage
embryo and endosperme2
Treatment
salt-treatede2
Outcome
post-transcriptional and translational changese2
Qualifier
substantial differencese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“we found substantial differences in post-transcriptional and translational changes between salt-treated embryo and endosperm”

✓ located verbatim in the source · abstract, characters 1079–1203 · show in text ↑
e4

“Little is known how high salinity affects seed germination of C4 plant, Zea mays”

✓ located verbatim in the source · abstract, characters 210–290 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Alternative splicing and other regulatory mechanisms are likely to mediate early responses to salt stress during maize seed germination.

Taxon
maizeZea mayse3
Outcome
early responses to salt stresse3
Qualifier
alternative splicinge3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“these regulatory mechanisms, such as alternative splicing, are likely to mediate early responses to salt stress during maize seed germination”

✓ located verbatim in the source · abstract, characters 1243–1384 · show in text ↑

sodium chloride · physiology: hormones · Zea mays (maize)Results differ

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

sodium chloride · growth · Zea mays (maize)Results differ

112 papers: 19 positive, 93 negative or no effect

18 papers in the same direction as this paper · 93 in the opposite direction

  1. negative
  2. negative
  3. negative

108 papers more in this group

See all 112 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.