Paper · 2020 · Frontiers in Plant Science

CRISPR/Cas9-Mediated Knockout of Galactinol Synthase-Encoding Genes Reduces Raffinose Family Oligosaccharide Levels in Soybean Seeds

Huy Le; Nhung Hong Nguyen; Dong Thị Ta; et al.

9
claims
18
verbatim quotes
69
citations
3
research areas
✓
Open access · cc-by

Abstract

Raffinose family oligosaccharides (RFOs) are major soluble carbohydrates in soybean seeds that cannot be digested by human and other monogastric animals. Hence, a major goal is to reduce RFO levels to improve the nutritional quality of soybean. In this study, we utilized a dual gRNAs CRISPR/Cas9 system to induce knockouts in two soybean galactinol synthase (GOLS) genes, GmGOLS1A and its homeolog GmGOLS1B . Genotyping of T0 plants showed that the construct design was efficient in inducing various deletions in the target sites or sequences spanning the two target sites of both GmGOLS1A and GmGOLS1B genes. A subset of induced alleles was successfully transferred to progeny and, at the T2 generation, we identified null segregants of single and double mutant genotypes without off-target induced mutations. The seed carbohydrate analysis of double mutant lines showed a reduction in the total RFO content of soybean seed from 64.7 mg/g dry weight to 41.95 mg/g dry weight, a 35.2% decrease. On average, the stachyose content, the most predominant RFO in soybean seeds, decreased by 35.4% in double mutant soybean, while the raffinose content increased by 41.7%. A slight decrease in verbascose content was also observed in mutant lines. Aside from changes in soluble carbohydrate content, some mutant lines also exhibited increased protein and fat contents. Otherwise, no difference in seed weight, seed germination, plant development and morphology was observed in the mutants. Our findings indicate that GmGOLS1A and GmGOLS1B contribute to the soybean oligosaccharide profile through RFO biosynthesis pathways, and are promising targets for future investigation, as well as crop improvement efforts. Our results also demonstrate the potential in using elite soybean cultivars for transformation and targeted genome editing.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

The construct induced deletions at both GOLS targets.

Taxon
soybeanGlycine maxt0
Gene
GmGOLS1Ae0
Outcome
various deletionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the construct design was efficient in inducing various deletions in the target sites or sequences spanning the two target sites of both GmGOLS1A and GmGOLS1B genes”

✓ located verbatim in the source · abstract, characters 446–609 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Single and double mutant null segregants were identified without off-target induced mutations.

Taxon
soybeanGlycine maxt0
Outcome
null segregants of single and double mutant genotypes without off-target induced mutationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“we identified null segregants of single and double mutant genotypes without off-target induced mutations”

✓ located verbatim in the source · abstract, characters 706–810 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Double mutants had 35.2% lower total seed RFO content.

Taxon
soybeanGlycine maxt0
Outcome
total RFO contente0
Direction
decreasee0
Value
35.2%e0
Qualifier
64.7 mg/g dry weight to 41.95 mg/g dry weighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“reduction in the total RFO content of soybean seed from 64.7 mg/g dry weight to 41.95 mg/g dry weight, a 35.2% decrease”

✓ located verbatim in the source · abstract, characters 875–994 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Stachyose content decreased 35.4% in double mutants.

Taxon
soybeanGlycine maxt0
Material
double mutant soybeane0
Outcome
stachyose contente0
Direction
decreasede0
Value
35.4%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“stachyose content, the most predominant RFO in soybean seeds, decreased by 35.4% in double mutant soybean”

✓ located verbatim in the source · abstract, characters 1012–1117 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Raffinose content increased 41.7% in double mutants.

Taxon
soybeanGlycine maxt0
Outcome
raffinose contente0
Direction
increasede0
Value
41.7%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“raffinose content increased by 41.7%”

✓ located verbatim in the source · abstract, characters 1129–1165 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Verbascose content decreased slightly in mutant lines.

Taxon
soybeanGlycine maxt0
Material
mutant linese0
Outcome
verbascose contente0
Direction
decreasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“A slight decrease in verbascose content was also observed in mutant lines”

✓ located verbatim in the source · abstract, characters 1167–1240 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Some mutant lines had increased protein and fat contents.

Taxon
soybeanGlycine maxt0
Material
mutant linese0
Outcome
protein and fat contentse0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“some mutant lines also exhibited increased protein and fat contents”

✓ located verbatim in the source · abstract, characters 1294–1361 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Mutants showed no difference in seed weight, germination, development, or morphology.

Taxon
soybeanGlycine maxt0
Material
mutantse0
Outcome
seed weight, seed germination, plant development and morphologye0
Direction
no differencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“no difference in seed weight, seed germination, plant development and morphology was observed in the mutants”

✓ located verbatim in the source · abstract, characters 1374–1482 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

GmGOLS1A and GmGOLS1B contribute to the soybean oligosaccharide profile.

Taxon
soybeanGlycine maxt0
Gene
GmGOLS1A and GmGOLS1Be0
Outcome
soybean oligosaccharide profilee0
Qualifier
RFO biosynthesis pathwayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GmGOLS1A and GmGOLS1B contribute to the soybean oligosaccharide profile through RFO biosynthesis pathways”

✓ located verbatim in the source · abstract, characters 1511–1616 · show in text ↑
t0

“Soybean Seeds”

✓ located verbatim in the source · title, characters 119–132 · show in text ↑