Paper · 2021 · Journal of Applied Microbiology

Rhizobacterial Bacillus mycoides functions in stimulating the antioxidant defence system and multiple phytohormone signalling pathways to regulate plant growth and stress tolerance

Andi Kurniawan; Huey‐wen Chuang

15
claims
36
verbatim quotes
33
citations
4
research areas
—
Not open access

Abstract

Aims To analyse effects and mechanisms of plant growth promotion mediated by Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings. Methods and Results Bacillus mycoides strain A3 (BmA3) isolated from the bamboo rhizosphere produced phytohormones, including indole-3-acetic acid (IAA) and gibberellic acid (GA), and exhibited phosphate solubilization and radical scavenging activities. A. thaliana seedlings inoculated with BmA3 exhibited an altered root architecture including an increased number of lateral roots and root hairs. Likewise, enhanced photosynthetic efficiency through the accumulation of higher levels of chlorophyll and starch, and increased plant size and fresh weight were observed in the BmA3-treated seedlings. This bacterial inoculation stimulated the antioxidant defence system by increasing the activities of catalase (CAT), guaiacol peroxidase (GPX), ascorbate peroxidase (APX) and phenylalanine ammonia-lyase (PAL). Secondary metabolites, including phenolic compounds, flavonoids and glucosinolates, were induced to higher levels in the BmA3-treated plants. Under drought and heat stresses, lower levels of H2O2, malondialdehyde (MDA) and electrolyte leakage were noticed in the treated seedlings. Genes involved in the signalling pathway of jasmonic acid (JA) including MYC2 and lipoxygenase 1 (LOX1) and salicylic acid (SA) including SAR DEFICIENT 1 (SARD1) and CAM-BINDING PROTEIN 60-LIKE G (CBP60G), and the antioxidant defence system including Ascorbate peroxidase (AtAPX) and alternative oxidase (AOX) were upregulated in BmA3-treated plants. Moreover, pathogenesis-related protein 1 (PR-1) and PR-2, marker genes for disease resistance, as well as DREB2A and HsFA2, which function in abiotic stress regulation, were also upregulated. Conclusions BmA3 was able to activate JA and SA signalling pathways to induce plant growth and abiotic stress tolerance in A. thaliana seedlings. Significance and Impact of Study The plant growth promotion and increased stress tolerance induced by BmA3 were the result of the combined effects of microbial metabolites and activated host plant responses, including phytohormone signalling pathways and antioxidant defence systems.

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Claims 15

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3-inoculated Arabidopsis seedlings had an increased number of lateral roots and root hairs.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
inoculated with BmA3e1
Interactor
BmA3e0symbiont
Outcome
number of lateral roots and root hairse1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“A. thaliana seedlings inoculated with BmA3 exhibited an altered root architecture including an increased number of lateral roots and root hairs”

✓ located verbatim in the source · abstract, characters 402–545 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3-treated Arabidopsis seedlings showed enhanced photosynthetic efficiency.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e2
Interactor
BmA3e0symbiont
Outcome
photosynthetic efficiencye2
Direction
enhancede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e2

“enhanced photosynthetic efficiency through the accumulation of higher levels of chlorophyll and starch, and increased plant size and fresh weight were observed in the BmA3-treated seedlings”

✓ located verbatim in the source · abstract, characters 557–746 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3-treated Arabidopsis seedlings accumulated higher levels of chlorophyll and starch.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e2
Interactor
BmA3e0symbiont
Outcome
chlorophyll and starche2
Direction
highere2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e2

“enhanced photosynthetic efficiency through the accumulation of higher levels of chlorophyll and starch, and increased plant size and fresh weight were observed in the BmA3-treated seedlings”

✓ located verbatim in the source · abstract, characters 557–746 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3-treated Arabidopsis seedlings showed increased plant size and fresh weight.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e2
Interactor
BmA3e0symbiont
Outcome
plant size and fresh weighte2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e2

“enhanced photosynthetic efficiency through the accumulation of higher levels of chlorophyll and starch, and increased plant size and fresh weight were observed in the BmA3-treated seedlings”

✓ located verbatim in the source · abstract, characters 557–746 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bacterial inoculation increased the activities of catalase, guaiacol peroxidase and ascorbate peroxidase in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
bacterial inoculatione3
Interactor
BmA3e0symbiont
Gene
catalase (CAT), guaiacol peroxidase (GPX), ascorbate peroxidase (APX)e3
Outcome
activitiese3
Direction
increasinge3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e3

“This bacterial inoculation stimulated the antioxidant defence system by increasing the activities of catalase (CAT), guaiacol peroxidase (GPX), ascorbate peroxidase (APX) and phenylalanine ammonia-lyase (PAL)”

✓ located verbatim in the source · abstract, characters 748–956 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bacterial inoculation increased phenylalanine ammonia-lyase activity in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
bacterial inoculatione3
Interactor
BmA3e0symbiont
Gene
phenylalanine ammonia-lyase (PAL)e3
Outcome
activitiese3
Direction
increasinge3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e3

“This bacterial inoculation stimulated the antioxidant defence system by increasing the activities of catalase (CAT), guaiacol peroxidase (GPX), ascorbate peroxidase (APX) and phenylalanine ammonia-lyase (PAL)”

✓ located verbatim in the source · abstract, characters 748–956 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3-treated plants had higher levels of secondary metabolites, including phenolic compounds, flavonoids and glucosinolates.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e4
Interactor
BmA3e0symbiont
Outcome
Secondary metabolites, including phenolic compounds, flavonoids and glucosinolatese4
Direction
highere4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e4

“Secondary metabolites, including phenolic compounds, flavonoids and glucosinolates, were induced to higher levels in the BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 958–1098 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under drought and heat stress, BmA3-treated seedlings had lower H2O2, malondialdehyde and electrolyte leakage.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
drought and heat stressese5
Interactor
BmA3e0symbiont
Outcome
H2O2, malondialdehyde (MDA) and electrolyte leakagee5
Direction
lowere5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e5

“Under drought and heat stresses, lower levels of H2O2, malondialdehyde (MDA) and electrolyte leakage were noticed in the treated seedlings”

✓ located verbatim in the source · abstract, characters 1100–1238 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3 upregulated the jasmonic acid signalling genes MYC2 and LOX1 in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e7
Interactor
BmA3e0symbiont
Gene
MYC2 and lipoxygenase 1 (LOX1)e6
Outcome
Genes involved in the signalling pathway of jasmonic acid (JA)e6
Direction
upregulatede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e6

“Genes involved in the signalling pathway of jasmonic acid (JA) including MYC2 and lipoxygenase 1 (LOX1)”

✓ located verbatim in the source · abstract, characters 1240–1343 · show in text ↑
e7

“upregulated in BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 1555–1589 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3 upregulated the salicylic acid signalling genes SARD1 and CBP60G in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e7
Interactor
BmA3e0symbiont
Gene
SAR DEFICIENT 1 (SARD1) and CAM-BINDING PROTEIN 60-LIKE G (CBP60G)e1
Outcome
Genes involved in the signalling pathwaye2
Direction
upregulatede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“salicylic acid (SA) including SAR DEFICIENT 1 (SARD1) and CAM-BINDING PROTEIN 60-LIKE G (CBP60G)”

✓ located verbatim in the source · abstract, characters 1348–1444 · show in text ↑
e2

“Genes involved in the signalling pathway”

✓ located verbatim in the source · abstract, characters 1240–1280 · show in text ↑
e7

“upregulated in BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 1555–1589 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3 upregulated the antioxidant defence genes AtAPX and AOX in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e7
Interactor
BmA3e0symbiont
Gene
Ascorbate peroxidase (AtAPX) and alternative oxidase (AOX)e1
Outcome
antioxidant defence systeme1
Direction
upregulatede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“the antioxidant defence system including Ascorbate peroxidase (AtAPX) and alternative oxidase (AOX)”

✓ located verbatim in the source · abstract, characters 1450–1549 · show in text ↑
e7

“upregulated in BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 1555–1589 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3 upregulated the disease-resistance marker genes PR-1 and PR-2 in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e7
Interactor
BmA3e0symbiont
Gene
pathogenesis-related protein 1 (PR-1) and PR-2e1
Outcome
marker genes for disease resistancee1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“Moreover, pathogenesis-related protein 1 (PR-1) and PR-2, marker genes for disease resistance, as well as DREB2A and HsFA2, which function in abiotic stress regulation, were also upregulated”

✓ located verbatim in the source · abstract, characters 1591–1781 · show in text ↑
e7

“upregulated in BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 1555–1589 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BmA3 upregulated the abiotic stress regulators DREB2A and HsFA2 in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
BmA3e7
Interactor
BmA3e0symbiont
Gene
DREB2A and HsFA2e1
Outcome
abiotic stress regulatione1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“Moreover, pathogenesis-related protein 1 (PR-1) and PR-2, marker genes for disease resistance, as well as DREB2A and HsFA2, which function in abiotic stress regulation, were also upregulated”

✓ located verbatim in the source · abstract, characters 1591–1781 · show in text ↑
e7

“upregulated in BmA3-treated plants”

✓ located verbatim in the source · abstract, characters 1555–1589 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Bacillus mycoides strain A3 produced phytohormones, including indole-3-acetic acid and gibberellic acid.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Interactor
BmA3e1symbiont
Outcome
phytohormones, including indole-3-acetic acid (IAA) and gibberellic acid (GA)e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“Bacillus mycoides strain A3 (BmA3) isolated from the bamboo rhizosphere produced phytohormones, including indole-3-acetic acid (IAA) and gibberellic acid (GA), and exhibited phosphate solubilization and radical scavenging activities”

✓ located verbatim in the source · abstract, characters 168–400 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Bacillus mycoides strain A3 showed phosphate solubilization and radical scavenging activities.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Interactor
BmA3e1symbiont
Outcome
phosphate solubilization and radical scavenging activitiese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus mycoides strain A3 (BmA3), in Arabidopsis thaliana seedlings”

✓ located verbatim in the source · abstract, characters 77–146 · show in text ↑
e1

“Bacillus mycoides strain A3 (BmA3) isolated from the bamboo rhizosphere produced phytohormones, including indole-3-acetic acid (IAA) and gibberellic acid (GA), and exhibited phosphate solubilization and radical scavenging activities”

✓ located verbatim in the source · abstract, characters 168–400 · show in text ↑

heat · physiology: oxidative · Arabidopsis thaliana (thale cress)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive
See all 4 papers →

drought · physiology: oxidative · Arabidopsis thaliana (thale cress)Positive and negative results

4 papers: 1 positive, 3 negative or no effect

3 in the opposite direction

  1. negative
  2. negative
  3. negative
See all 4 papers →

inoculation · growth · Arabidopsis thaliana (thale cress)Positive and negative results

52 papers: 46 positive, 6 negative or no effect

45 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. no effect
  3. no effect

48 papers more in this group

See all 52 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.