Paper · 2015

Rice PCR1 affects grain weight and zinc accumulation

Hyun‐Sook Lee; Won‐Yong Song; Sang-Nag Ahn

11
claims
20
verbatim quotes
0
citations
4
research areas
—
Not open access

Abstract

Plants strictly regulate the uptake and distribution of Zinc (Zn), which is essential for growth and development. Arabidopsis thaliana plant cadmium resistance 2 (AtPCR2), a protein containing a placenta-specific 8 domain (PLAC8), is specifically expressed in the vascular tissue and epidermis of roots and is thought to act as a Zn efflux transporter (Song et al. 2010). Proteins containing PLAC8 domain function as major organ size regulators in Solanum lycopersicum and Zea may, and putative metal ion transporters in Arabidopsis thaliana, Oryza sativa and Brassica juncea. But, there are no reports which showed that the protein containing PALC8 have the function both of seed size regulation and metal homeostasis.In our study, we found that plant cadmium resistance 1 (PCR1) influences on both Zn accumulation and grain weight in rice. The expression of OsPCR1 is elevated in developing seeds of introgression line for GW2, which encodes a protein known to regulate grain weight. Grain weight of OsPCR1 knockout and knockdown lines decreased than the wild type, while OsPCR1 overexpression lines produced heavier grains. Furthermore, the grains of OsPCR1 knockdown lines exhibited substantially higher Zn and lower Cd concentrations than the control. We identified some variation in the OsPCR1 amino acid sequence between the japonica and indica rice types using 15 different rice varieties. Japonica-type PCR1 had a shorter N-terminus than did PCR1 in the other rice types. Furthermore, japonica-type grains accumulated less Zn than did indica-type grains. Our study suggests that rice PCR1 maintains metal ion homeostasis and grain weight and might have been selected for during domestication.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

OsPCR1 expression was elevated in developing seeds of the GW2 introgression line.

Material
introgression line for GW2e0
Organ / stage
developing seedse0
Gene
OsPCR1e0
Outcome
expression of OsPCR1e0
Direction
elevatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The expression of OsPCR1 is elevated in developing seeds of introgression line for GW2”

✓ located verbatim in the source · abstract, characters 842–928 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsPCR1 knockout lines had lower grain weight than wild type.

Treatment
OsPCR1 knockoute0
Gene
OsPCR1e0
Outcome
Grain weighte0
Direction
decreasede0
Comparator
wild typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Grain weight of OsPCR1 knockout and knockdown lines decreased than the wild type”

✓ located verbatim in the source · abstract, characters 986–1066 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsPCR1 knockdown lines had lower grain weight than wild type.

Treatment
knockdown linese0
Gene
OsPCR1e0
Outcome
Grain weighte0
Direction
decreasede0
Comparator
wild typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Grain weight of OsPCR1 knockout and knockdown lines decreased than the wild type”

✓ located verbatim in the source · abstract, characters 986–1066 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsPCR1 overexpression lines produced heavier grains.

Treatment
OsPCR1 overexpressione0
Gene
OsPCR1e0
Outcome
grainse0
Direction
heaviere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsPCR1 overexpression lines produced heavier grains”

✓ located verbatim in the source · abstract, characters 1074–1125 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsPCR1 knockdown grains had substantially higher Zn concentrations than control.

Treatment
OsPCR1 knockdowne0
Gene
OsPCR1e0
Outcome
Zne0
Direction
highere0
Comparator
the controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the grains of OsPCR1 knockdown lines exhibited substantially higher Zn and lower Cd concentrations than the control”

✓ located verbatim in the source · abstract, characters 1140–1255 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsPCR1 knockdown grains had lower Cd concentrations than control.

Treatment
OsPCR1 knockdowne0
Gene
OsPCR1e0
Outcome
Cd concentrationse0
Direction
lowere0
Comparator
the controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the grains of OsPCR1 knockdown lines exhibited substantially higher Zn and lower Cd concentrations than the control”

✓ located verbatim in the source · abstract, characters 1140–1255 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsPCR1 amino acid sequence varied between japonica and indica rice types.

Material
japonica and indica rice typese0
Gene
OsPCR1e0
Outcome
variation in the OsPCR1 amino acid sequencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We identified some variation in the OsPCR1 amino acid sequence between the japonica and indica rice types using 15 different rice varieties”

✓ located verbatim in the source · abstract, characters 1257–1396 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Japonica-type PCR1 had a shorter N-terminus than PCR1 in other rice types.

Material
Japonica-typee0
Gene
PCR1e0
Outcome
N-terminuse0
Direction
shortere0
Comparator
the other rice typese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Japonica-type PCR1 had a shorter N-terminus than did PCR1 in the other rice types”

✓ located verbatim in the source · abstract, characters 1398–1479 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Japonica-type grains accumulated less Zn than indica-type grains.

Material
japonica-typee0
Outcome
Zne0
Direction
lesse0
Comparator
indica-typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“japonica-type grains accumulated less Zn than did indica-type grains”

✓ located verbatim in the source · abstract, characters 1494–1562 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 0–4 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors suggest rice PCR1 maintains metal homeostasis and grain weight.

Gene
PCR1e0
Outcome
metal ion homeostasis and grain weighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Our study suggests that rice PCR1 maintains metal ion homeostasis and grain weight”

✓ located verbatim in the source · abstract, characters 1564–1646 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest PCR1 may have been selected during domestication.

Gene
PCR1t0
Outcome
selected for during domesticatione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“might have been selected for during domestication”

✓ located verbatim in the source · abstract, characters 1651–1700 · show in text ↑
t0

“Rice PCR1”

✓ located verbatim in the source · title, characters 0–9 · show in text ↑