Paper · 2022 · Agronomy

Role of ZmGST Gene Family Involved in Nicosulfuron Stress Tolerance Revealed by Genomic and Transcriptomic Analyses

Xiaomin Liu; Dan Zhao; Xian Xu; et al.

10
claims
14
verbatim quotes
3
citations
2
research areas
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Open access · cc-by

Abstract

Glutathione S-transferases (GST) are a large family of polymorphous proteins that play important roles in herbicide detoxification and stress response. Nicosulfuron is the most broadly used herbicide in maize fields, and it can cause different injuries to maize varieties, but little is studied about the systemic and comprehensive GST gene family responding to nicosulfuron stress in maize. In this research, pre-treatment with glutathione S-transferase inhibitor 4-chloro-7-nitrobenzoxadiazole (NBD-Cl) increased nicosulfuron phytotoxicity to both sensitive and tolerant maize genotypes. A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome and named according to the nomenclature system. Based on phylogenetic analyses, highly conserved gene structure and motif distribution were detected in the same class. Chromosome mapping results showed that ZmGST genes were distributed over the 10 chromosomes unevenly. There were thirteen and eight gene pairs identified as tandem and segmental duplication events, respectively, which played important roles in the expansion of the GST gene family in maize. RNA-seq and qRT-PCR analyses showed that there were great dissimilarities in ZmGST gene expression patterns between the tolerant and sensitive maize plants. More highly expressed ZmGST genes were found in the tolerant than in the sensitive without nicosulfuron stress. However, under 60 g a.i. ha−1 nicosulfuron stress, more ZmGST genes were significantly upregulated in HB41 than in HB09. This study provided experimental evidence showing that glutathione S-transferases were involved in nicosulfuron stress in maize. It will contribute to the further functional analysis of the GST gene family in maize.

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Claims 10

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

NBD-Cl pre-treatment increased nicosulfuron phytotoxicity in both sensitive and tolerant maize genotypes

Taxon
maizeZea mayse0
Material
sensitive and tolerant maize genotypese0
Treatment
pre-treatment with glutathione S-transferase inhibitor 4-chloro-7-nitrobenzoxadiazole (NBD-Cl)e0
Outcome
nicosulfuron phytotoxicitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“pre-treatment with glutathione S-transferase inhibitor 4-chloro-7-nitrobenzoxadiazole (NBD-Cl) increased nicosulfuron phytotoxicity to both sensitive and tolerant maize genotypes”

✓ located verbatim in the source · abstract, characters 410–588 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A total of 55 ZmGST genes in six major sub-classes were identified in the maize genome

Taxon
maizeZea mayse1
Gene
ZmGSTe1
Outcome
ZmGST genes belonging to six major sub-classese1
Value
55e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome”

✓ located verbatim in the source · abstract, characters 590–686 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGST genes are distributed unevenly over the 10 maize chromosomes

Taxon
maizeZea mayse1
Gene
ZmGSTe2
Outcome
distributed over the 10 chromosomese2
Qualifier
unevenlye2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome”

✓ located verbatim in the source · abstract, characters 590–686 · show in text ↑
e2

“Chromosome mapping results showed that ZmGST genes were distributed over the 10 chromosomes unevenly”

✓ located verbatim in the source · abstract, characters 855–955 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Thirteen tandem duplication gene pairs were identified in the maize GST family

Taxon
maizeZea mayse3
Gene
GST gene familye3
Outcome
gene pairs identified as tandeme3
Value
thirteene3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“There were thirteen and eight gene pairs identified as tandem and segmental duplication events, respectively, which played important roles in the expansion of the GST gene family in maize”

✓ located verbatim in the source · abstract, characters 957–1144 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Eight segmental duplication gene pairs were identified in the maize GST family

Taxon
maizeZea mayse3
Gene
GST gene familye3
Outcome
segmental duplication eventse3
Value
eighte3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“There were thirteen and eight gene pairs identified as tandem and segmental duplication events, respectively, which played important roles in the expansion of the GST gene family in maize”

✓ located verbatim in the source · abstract, characters 957–1144 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGST expression patterns differ greatly between tolerant and sensitive maize plants

Taxon
maizeZea mayse4
Material
tolerant and sensitive maize plantse4
Outcome
ZmGST gene expression patternse4
Qualifier
great dissimilaritiese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e4

“RNA-seq and qRT-PCR analyses showed that there were great dissimilarities in ZmGST gene expression patterns between the tolerant and sensitive maize plants”

✓ located verbatim in the source · abstract, characters 1146–1301 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Without nicosulfuron stress, more ZmGST genes are highly expressed in the tolerant than in the sensitive maize

Taxon
maizeZea mayse1
Material
tolerante5
Outcome
highly expressed ZmGST genese5
Direction
Moree5
Comparator
sensitivee5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome”

✓ located verbatim in the source · abstract, characters 590–686 · show in text ↑
e5

“More highly expressed ZmGST genes were found in the tolerant than in the sensitive without nicosulfuron stress”

✓ located verbatim in the source · abstract, characters 1303–1413 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Under 60 g a.i. ha−1 nicosulfuron, more ZmGST genes were significantly upregulated in HB41 than in HB09

Taxon
maizeZea mayse1
Material
HB41e6
Treatment
60 g a.i. ha−1 nicosulfuron stresse6
Outcome
ZmGST genes were significantly upregulatede6
Direction
moree6
Comparator
HB09e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome”

✓ located verbatim in the source · abstract, characters 590–686 · show in text ↑
e6

“under 60 g a.i. ha−1 nicosulfuron stress, more ZmGST genes were significantly upregulated in HB41 than in HB09”

✓ located verbatim in the source · abstract, characters 1424–1534 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Glutathione S-transferases are involved in nicosulfuron stress in maize

Taxon
maizeZea mayse7
Gene
glutathione S-transferasese7
Outcome
involved in nicosulfuron stresse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e7

“This study provided experimental evidence showing that glutathione S-transferases were involved in nicosulfuron stress in maize”

✓ located verbatim in the source · abstract, characters 1536–1663 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gene structure and motif distribution are highly conserved within the same ZmGST class

Taxon
maizeZea mayse1
Outcome
gene structure and motif distributione7
Qualifier
highly conservede7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“A total of 55 ZmGST genes belonging to six major sub-classes were identified in the maize genome”

✓ located verbatim in the source · abstract, characters 590–686 · show in text ↑
e7

“Based on phylogenetic analyses, highly conserved gene structure and motif distribution were detected in the same class”

✓ located verbatim in the source · abstract, characters 735–853 · show in text ↑

nicosulfuron · molecular: expression · Zea mays (maize)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

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  2. positive
  3. positive
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.