Abstract
Aim of study: Intensive agriculture impacts physical, chemical, and biological characteristics of soil; therefore, the addition of organic matter (OM) to soil can have significant implications for crop production. This study investigated the impact of three crop management systems on tomato production and soil microbial communities in intensive greenhouse farming. Area of study: Province of Almería (Spain). Material and methods: The three crop management systems included: (1) conventional management, using synthetic chemical fertilizers without OM application (CM); (2) conventional management, using synthetic chemical fertilizers with at least one OM application in the last three years (CMOM); and (3) fully organic management, featuring yearly OM applications and no use of synthetic chemical fertilizers (ORG). Main results: Compared to CM soils, OM addition in CMOM and ORG led to higher soil NO3- and NH4+ content, which in turn increased nitrogen (N) availability, leading to an increase in soil respiration. The addition of OM also altered the composition of prokaryotic and fungal soil communities. Besides, the addition of OM reduced the presence and abundance of potential fungal pathogenic organisms, like Sclerotinia sp. and Plectosphaerella cucumerina. OM addition to conventionally managed greenhouses (CMOM) led to higher crop yields compared to CM greenhouses, resulting in an overall increase of 880 g m-2. Production under fully organic management (ORG) was lowest, possibly due to the nutrient and pest management practices used. Research highlights: Our data show the importance of organic matter management in shaping microbial communities in intensive greenhouse systems, which can be a key factor in developing a more sustainable agriculture to feed a growing human population.
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Claims 9
Claim · model-written summary
Organic matter addition raised soil nitrate and ammonium relative to conventional management.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- OM additione0
- Outcome
- soil NO3- and NH4+ contente0
- Direction
- highere0
- Comparator
- CM soilse0
- Setting
- greenhouse farmingt0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“Compared to CM soils, OM addition in CMOM and ORG led to higher soil NO3- and NH4+ content”
t0“tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Organic matter addition increased nitrogen availability.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- organic mattert0
- Outcome
- nitrogen (N) availabilitye0
- Direction
- increasede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“which in turn increased nitrogen (N) availability”
t0“organic matter management on the activity and structure of soil microbial community in intensive tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Organic matter addition increased soil respiration.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- organic mattert0
- Outcome
- soil respiratione0
- Direction
- increasee0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“leading to an increase in soil respiration.”
t0“organic matter management on the activity and structure of soil microbial community in intensive tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Organic matter addition altered prokaryotic soil community composition.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- addition of OMe0
- Outcome
- composition of prokaryotice0
Not reportedComparatorDirection
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“The addition of OM also altered the composition of prokaryotic and fungal soil communities.”
t0“tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Organic matter addition altered fungal soil community composition.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- addition of OMe0
- Outcome
- fungal soil communitiese0
Not reportedComparatorDirection
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“The addition of OM also altered the composition of prokaryotic and fungal soil communities.”
t0“tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Organic matter addition reduced the presence and abundance of Sclerotinia sp.
- Taxon
- Sclerotinia sp.
Sclerotiniae0 - Treatment
- addition of OMe0
- Outcome
- presence and abundancee0
- Direction
- reducede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“the addition of OM reduced the presence and abundance of potential fungal pathogenic organisms, like Sclerotinia sp. and Plectosphaerella cucumerina.”
Claim · model-written summary
Organic matter addition reduced the presence and abundance of Plectosphaerella cucumerina.
- Taxon
- Plectosphaerella cucumerinaPlectosphaerella cucumerinae0
- Treatment
- addition of OMe0
- Outcome
- presence and abundancee0
- Direction
- reducede0
Not reportedComparator
Verbatim
e0“the addition of OM reduced the presence and abundance of potential fungal pathogenic organisms, like Sclerotinia sp. and Plectosphaerella cucumerina.”
Claim · model-written summary
CMOM greenhouses yielded 880 g m-2 more tomato crop than CM greenhouses.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- OM addition to conventionally managed greenhouses (CMOM)e0
- Outcome
- crop yieldse0
- Direction
- highere0
- Value
- 880 g m-2e0
- Comparator
- CM greenhousese0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“OM addition to conventionally managed greenhouses (CMOM) led to higher crop yields compared to CM greenhouses, resulting in an overall increase of 880 g m-2.”
t0“tomato (Solanum lycopersicum L.) greenhouse farming”
Claim · model-written summary
Fully organic management had the lowest tomato production.
- Taxon
- tomato
Solanum lycopersicumt0 - Treatment
- fully organic management (ORG)e0
- Outcome
- Productione0
- Direction
- loweste0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“Production under fully organic management (ORG) was lowest”
t0“tomato (Solanum lycopersicum L.) greenhouse farming”
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