Paper · 2023 · International Journal of Molecular Sciences

ABF1 Positively Regulates Rice Chilling Tolerance via Inducing Trehalose Biosynthesis

Yazhou Shu; Wensheng Zhang; Liqun Tang; et al.

10
claims
20
verbatim quotes
23
citations
2
research areas
✓
Open access · cc-by

Abstract

Chilling stress seriously limits grain yield and quality worldwide. However, the genes and the underlying mechanisms that respond to chilling stress remain elusive. This study identified ABF1, a cold-induced transcription factor of the bZIP family. Disruption of ABF1 impaired chilling tolerance with increased ion leakage and reduced proline contents, while ABF1 over-expression lines exhibited the opposite tendency, suggesting that ABF1 positively regulated chilling tolerance in rice. Moreover, SnRK2 protein kinase SAPK10 could phosphorylate ABF1, and strengthen the DNA-binding ability of ABF1 to the G-box cis-element of the promoter of TPS2, a positive regulator of trehalose biosynthesis, consequently elevating the TPS2 transcription and the endogenous trehalose contents. Meanwhile, applying exogenous trehalose enhanced the chilling tolerance of abf1 mutant lines. In summary, this study provides a novel pathway ‘SAPK10-ABF1-TPS2’ involved in rice chilling tolerance through regulating trehalose homeostasis.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

ABF1 was identified as a cold-induced bZIP transcription factor.

Gene
ABF1e0
Outcome
ABF1, a cold-induced transcription factore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“This study identified ABF1, a cold-induced transcription factor of the bZIP family”

✓ located verbatim in the source · abstract, characters 165–247 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of ABF1 impaired chilling tolerance.

Treatment
Disruption of ABF1e0
Gene
ABF1e0
Outcome
chilling tolerancee0
Direction
impairede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of ABF1 impaired chilling tolerance”

✓ located verbatim in the source · abstract, characters 249–295 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of ABF1 increased ion leakage.

Treatment
Disruption of ABF1e0
Gene
ABF1e0
Outcome
ion leakagee0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of ABF1 impaired chilling tolerance with increased ion leakage”

✓ located verbatim in the source · abstract, characters 249–322 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of ABF1 reduced proline content.

Treatment
Disruption of ABF1e0
Gene
ABF1e0
Outcome
proline contentse0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of ABF1 impaired chilling tolerance with increased ion leakage and reduced proline contents”

✓ located verbatim in the source · abstract, characters 249–351 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABF1 overexpression showed the opposite tendency for chilling tolerance, ion leakage and proline content.

Treatment
ABF1 over-expression linese0
Gene
ABF1e0
Outcome
opposite tendencye0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ABF1 over-expression lines exhibited the opposite tendency”

✓ located verbatim in the source · abstract, characters 359–417 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

SAPK10 phosphorylated ABF1.

Gene
SnRK2 protein kinase SAPK10e0
Outcome
phosphorylate ABF1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“SnRK2 protein kinase SAPK10 could phosphorylate ABF1”

✓ located verbatim in the source · abstract, characters 499–551 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

SAPK10 strengthened ABF1 binding to the TPS2 promoter G-box.

Gene
TPS2e0
Outcome
DNA-binding ability of ABF1e0
Qualifier
G-box cis-elemente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“strengthen the DNA-binding ability of ABF1 to the G-box cis-element of the promoter of TPS2”

✓ located verbatim in the source · abstract, characters 557–648 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

The pathway elevated TPS2 transcription.

Gene
TPS2e0
Outcome
TPS2 transcriptione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“consequently elevating the TPS2 transcription”

✓ located verbatim in the source · abstract, characters 698–743 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

The pathway elevated endogenous trehalose content.

Outcome
endogenous trehalose contentse0
Qualifier
endogenous trehalose contentse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“and the endogenous trehalose contents”

✓ located verbatim in the source · abstract, characters 744–781 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous trehalose enhanced chilling tolerance of abf1 mutant lines.

Material
abf1 mutant linese0
Treatment
applying exogenous trehalosee0
Outcome
chilling tolerancee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“applying exogenous trehalose enhanced the chilling tolerance of abf1 mutant lines”

✓ located verbatim in the source · abstract, characters 794–875 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 26–30 · show in text ↑

loss of function · physiology: osmolytes · Oryza sativa (rice)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

loss of function · tolerance: abiotic · Oryza sativa (rice)Positive and negative results

31 papers: 20 positive, 11 negative or no effect

10 papers in the same direction as this paper · 20 in the opposite direction

  1. positive
  2. positive
  3. positive

27 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.