Paper · 2023 · Botanica Serbica

Expression of heavy metal ATPases (HMA1 and HMA3) in Brassica nigra and B. juncea grown at different Cu levels

Nuriye Meraklı; Abdulrezzak Memon

10
claims
22
verbatim quotes
2
citations
2
research areas
✓
Open access · cc-by

Abstract

Metal pollution is a major environmental problem which affects agriculture and human health. Turkey has significant Cu mining areas in Diyarbak?r and its surrounding areas (Southeast Anatolia). Several crop plants cultivated in these areas are irrigated with water from the Tigris, and most agricultural lands are contaminated with Cu. Brassica nigra and B. juncea are well-known metal accumulator plant species which can hyperaccumulate metals, including copper, in their shoots. The purpose of this study is to evaluate their potential for the phytoremediation of Cu from these contaminated areas as an environmentally friendly and cost-effective means of reducing Cu-contamination. In this research, B. nigra and B. juncea plants were grown in soil at different Cu concentrations (0 to 1000 ?M) and showed no toxicity symptoms while accumulating a significant amount of metal in their leaves. In the leaves of both species, the Cu content increased significantly with the increase in the Cu level in the media. HMA1 (Heavy Metal ATPase 1) in the leaves of both plant species gradually increased with increased Cu levels until 50 ?M, then its expression slowly decreased with the further increase in Cu levels. The expression of HMA3 also increased with an increase in Cu in the leaves of both plant species. However, its expression pattern differed from that of HMA1. Our data showed that an increase in Cu levels in the leaves triggers the expression of both genes, suggesting that they play an active role in Cu detoxification. We propose that these plant species could be used for the decontamination of Cu from polluted soils. These data also indicate that Cu accumulation and tolerance in both plant species is probably a multi-genetic response, possibly involving several other transporter genes in the stress signal pathway. Hence, we also explored the expression of the other metal transporters, such as other HMAs (HMAs 5-8), Nramps (e.g., Nramp3), COPT proteins, and some Cu chaperons in these plant species.

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Claims 10

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Brassica nigra and B. juncea grown at 0 to 1000 µM Cu in soil showed no toxicity symptoms.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Treatment
different Cu concentrationse1
Outcome
toxicity symptomse1
Setting
soile1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e1

“B. nigra and B. juncea plants were grown in soil at different Cu concentrations (0 to 1000 ?M) and showed no toxicity symptoms while accumulating a significant amount of metal in their leaves”

✓ located verbatim in the source · abstract, characters 703–894 · show in text ↑
Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Brassica nigra and B. juncea accumulated a significant amount of metal in their leaves.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Organ / stage
leavese1
Outcome
amount of metale1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e1

“B. nigra and B. juncea plants were grown in soil at different Cu concentrations (0 to 1000 ?M) and showed no toxicity symptoms while accumulating a significant amount of metal in their leaves”

✓ located verbatim in the source · abstract, characters 703–894 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Cu content in the leaves of both species increased significantly with increasing Cu level in the medium.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Organ / stage
leavese2
Treatment
the increase in the Cu level in the mediae2
Outcome
Cu contente2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e2

“In the leaves of both species, the Cu content increased significantly with the increase in the Cu level in the media”

✓ located verbatim in the source · abstract, characters 896–1012 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

HMA1 expression in the leaves of both species gradually increased with increasing Cu levels until 50 ?M.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Organ / stage
leavese3
Treatment
increased Cu levelse3
Gene
HMA1 (Heavy Metal ATPase 1)e3
Outcome
HMA1 (Heavy Metal ATPase 1) in the leavese3
Direction
increasede3
Qualifier
until 50 ?Me3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e3

“HMA1 (Heavy Metal ATPase 1) in the leaves of both plant species gradually increased with increased Cu levels until 50 ?M”

✓ located verbatim in the source · abstract, characters 1014–1134 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

HMA1 expression in the leaves decreased slowly with further increases in Cu levels above 50 ?M.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Organ / stage
leavese3
Treatment
further increase in Cu levelse4
Gene
HMA1e3
Outcome
expressione4
Direction
decreasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e3

“HMA1 (Heavy Metal ATPase 1) in the leaves of both plant species gradually increased with increased Cu levels until 50 ?M”

✓ located verbatim in the source · abstract, characters 1014–1134 · show in text ↑
e4

“then its expression slowly decreased with the further increase in Cu levels”

✓ located verbatim in the source · abstract, characters 1136–1211 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

HMA3 expression in the leaves of both species increased with increasing Cu.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Organ / stage
leavese5
Treatment
an increase in Cue5
Gene
HMA3e5
Outcome
expressione5
Direction
increasede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e5

“The expression of HMA3 also increased with an increase in Cu in the leaves of both plant species”

✓ located verbatim in the source · abstract, characters 1213–1309 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The HMA3 expression pattern differed from that of HMA1.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Gene
HMA3e5
Outcome
expression patterne6
Direction
differede6
Comparator
HMA1e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e5

“The expression of HMA3 also increased with an increase in Cu in the leaves of both plant species”

✓ located verbatim in the source · abstract, characters 1213–1309 · show in text ↑
e6

“However, its expression pattern differed from that of HMA1”

✓ located verbatim in the source · abstract, characters 1311–1369 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

An increase in Cu levels in the leaves triggers expression of both HMA1 and HMA3, suggesting an active role in Cu detoxification.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Treatment
an increase in Cu levelse0
Outcome
expression of both genese0
Qualifier
play an active role in Cu detoxificatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e0

“Our data showed that an increase in Cu levels in the leaves triggers the expression of both genes, suggesting that they play an active role in Cu detoxification”

✓ located verbatim in the source · abstract, characters 1371–1531 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Brassica nigra and B. juncea could be used for decontamination of Cu from polluted soils.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Outcome
decontamination of Cu from polluted soilse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e7

“We propose that these plant species could be used for the decontamination of Cu from polluted soils”

✓ located verbatim in the source · abstract, characters 1533–1632 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

Cu accumulation and tolerance in both species is probably a multi-genetic response involving other transporter genes.

Taxon
Brassica nigra and B. junceaBrassica junceaBrassica nigrat0
Outcome
Cu accumulation and tolerancee0
Qualifier
multi-genetic responsee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗
Brassica nigra
Brassica nigra · TaxonMagnus Manske · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Brassica nigra and B. juncea”

✓ located verbatim in the source · title, characters 53–81 · show in text ↑
e0

“These data also indicate that Cu accumulation and tolerance in both plant species is probably a multi-genetic response, possibly involving several other transporter genes in the stress signal pathway”

✓ located verbatim in the source · abstract, characters 1634–1833 · show in text ↑

copper atom · nutrient: content · Brassica juncea (Indian mustard)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

in vitro · nutrient: content · Brassica juncea (Indian mustard)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.