Paper · 2023 · Environmental and Experimental Botany

The NIN-LIKE PROTINE1 (CsNLP1) transcription factor is involved in modulating the nitrate response in cucumber seedlings

Yang Li; Chenyang Feng; Yijing Xing; et al.

8
claims
17
verbatim quotes
6
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

Cucumber is one of the important vegetables cultivated in facilities in China. Due to the deterioration of soil quality in facilities and the low nitrogen use efficiency of existing varieties, it is common to pursue high yield through excessive application of nitrogen fertilizer. Improving crop nitrogen use efficiency is one of the important means to reduce nitrogen fertilizer input. Previous studies have shown that NLP (NIN-like protein) transcription factor family play an important role as transcription factors in regulating plant physiological responses to external nitrogen changes. However, there are few reports on NLPs in cucumber. Here we report that CsNLP1 is a potential candidate to improve cucumber nitrogen use ability. CsNLP1 silencing lines by virus-induced gene silencing (VIGS) showed a significant decrease in the plant biomass, chlorophyll content, nitrogen uptake, total nitrogen content, activities of NR, NIR, GDH, GOGAT and GS, and expression levels of genes involved in nitrogen assimilation and signalling under different nitrogen concentrations. In addition, transfer of CsNLP1 into Arabidopsis nlp7-1 mutant found that the phenotype, nitrate (NO3-) content, NR activity, NIR activity, GDH activity, GOGAT activity and GS activity in transgenic lines could be restored to the wild type level after NO3- treatment. Further study found that CsNLP1 could regulate the expression of NO3- responsive genes such as AtNIR1, AtNIA2, AtNRT1.1 and AtGS2 in plants. Overall, our data indicated that CsNLP1 can affect plant growth, and regulate nitrate assimilation by regulating nitrogen-related genes.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

CsNLP1 silencing decreased plant biomass, chlorophyll content and nitrogen uptake in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
virus-induced gene silencing (VIGS)e0
Gene
CsNLP1e0
Outcome
plant biomass, chlorophyll content, nitrogen uptakee1
Direction
decreasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cucumber seedlings”

✓ located verbatim in the source · title, characters 99–120 · show in text ↑
e0

“CsNLP1 silencing lines by virus-induced gene silencing (VIGS)”

✓ located verbatim in the source · abstract, characters 739–800 · show in text ↑
e1

“showed a significant decrease in the plant biomass, chlorophyll content, nitrogen uptake, total nitrogen content, activities of NR, NIR, GDH, GOGAT and GS, and expression levels of genes involved in nitrogen assimilation and signalling under different nitrogen concentrations”

✓ located verbatim in the source · abstract, characters 801–1076 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

CsNLP1 silencing decreased total nitrogen content and the NR and NIR activities in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
virus-induced gene silencing (VIGS)e0
Gene
CsNLP1e0
Outcome
total nitrogen content, activities of NR, NIRe1
Direction
decreasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cucumber seedlings”

✓ located verbatim in the source · title, characters 99–120 · show in text ↑
e0

“CsNLP1 silencing lines by virus-induced gene silencing (VIGS)”

✓ located verbatim in the source · abstract, characters 739–800 · show in text ↑
e1

“showed a significant decrease in the plant biomass, chlorophyll content, nitrogen uptake, total nitrogen content, activities of NR, NIR, GDH, GOGAT and GS, and expression levels of genes involved in nitrogen assimilation and signalling under different nitrogen concentrations”

✓ located verbatim in the source · abstract, characters 801–1076 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

CsNLP1 silencing decreased GDH, GOGAT and GS activities in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
virus-induced gene silencing (VIGS)e0
Gene
CsNLP1e0
Outcome
GDH, GOGAT and GSe1
Direction
decreasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cucumber seedlings”

✓ located verbatim in the source · title, characters 99–120 · show in text ↑
e0

“CsNLP1 silencing lines by virus-induced gene silencing (VIGS)”

✓ located verbatim in the source · abstract, characters 739–800 · show in text ↑
e1

“showed a significant decrease in the plant biomass, chlorophyll content, nitrogen uptake, total nitrogen content, activities of NR, NIR, GDH, GOGAT and GS, and expression levels of genes involved in nitrogen assimilation and signalling under different nitrogen concentrations”

✓ located verbatim in the source · abstract, characters 801–1076 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

CsNLP1 silencing decreased expression of nitrogen assimilation and signalling genes in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
virus-induced gene silencing (VIGS)e0
Gene
CsNLP1e0
Outcome
expression levels of genes involved in nitrogen assimilation and signallinge1
Direction
decreasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cucumber seedlings”

✓ located verbatim in the source · title, characters 99–120 · show in text ↑
e0

“CsNLP1 silencing lines by virus-induced gene silencing (VIGS)”

✓ located verbatim in the source · abstract, characters 739–800 · show in text ↑
e1

“showed a significant decrease in the plant biomass, chlorophyll content, nitrogen uptake, total nitrogen content, activities of NR, NIR, GDH, GOGAT and GS, and expression levels of genes involved in nitrogen assimilation and signalling under different nitrogen concentrations”

✓ located verbatim in the source · abstract, characters 801–1076 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transgenic Arabidopsis nlp7-1 lines restored phenotype and nitrate content to the wild-type level after NO3- treatment.

Taxon
ArabidopsisArabidopsise2
Material
nlp7-1 mutante2
Treatment
NO3- treatmente2
Gene
CsNLP1e2
Outcome
phenotype, nitrate (NO3-) contente2
Direction
restorede2
Comparator
wild type levele2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“transfer of CsNLP1 into Arabidopsis nlp7-1 mutant found that the phenotype, nitrate (NO3-) content, NR activity, NIR activity, GDH activity, GOGAT activity and GS activity in transgenic lines could be restored to the wild type level after NO3- treatment”

✓ located verbatim in the source · abstract, characters 1091–1344 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transgenic Arabidopsis nlp7-1 lines restored NR, NIR and GDH activities to the wild-type level after NO3- treatment.

Taxon
ArabidopsisArabidopsise2
Material
nlp7-1 mutante2
Treatment
NO3- treatmente2
Gene
CsNLP1e2
Outcome
NR activity, NIR activity, GDH activitye2
Direction
restorede2
Comparator
wild type levele2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“transfer of CsNLP1 into Arabidopsis nlp7-1 mutant found that the phenotype, nitrate (NO3-) content, NR activity, NIR activity, GDH activity, GOGAT activity and GS activity in transgenic lines could be restored to the wild type level after NO3- treatment”

✓ located verbatim in the source · abstract, characters 1091–1344 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transgenic Arabidopsis nlp7-1 lines restored GOGAT and GS activities to the wild-type level after NO3- treatment.

Taxon
ArabidopsisArabidopsise2
Material
nlp7-1 mutante2
Treatment
NO3- treatmente2
Gene
CsNLP1e2
Outcome
GOGAT activity and GS activitye2
Direction
restorede2
Comparator
wild type levele2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“transfer of CsNLP1 into Arabidopsis nlp7-1 mutant found that the phenotype, nitrate (NO3-) content, NR activity, NIR activity, GDH activity, GOGAT activity and GS activity in transgenic lines could be restored to the wild type level after NO3- treatment”

✓ located verbatim in the source · abstract, characters 1091–1344 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

CsNLP1 regulates the expression of nitrate-responsive genes such as AtNIR1, AtNIA2, AtNRT1.1 and AtGS2.

Taxon
ArabidopsisArabidopsise2
Gene
CsNLP1e3
Outcome
expression of NO3- responsive genese3
Qualifier
such as AtNIR1, AtNIA2, AtNRT1.1 and AtGS2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“transfer of CsNLP1 into Arabidopsis nlp7-1 mutant”

✓ located verbatim in the source · abstract, characters 1091–1140 · show in text ↑
e3

“Further study found that CsNLP1 could regulate the expression of NO3- responsive genes such as AtNIR1, AtNIA2, AtNRT1.1 and AtGS2 in plants”

✓ located verbatim in the source · abstract, characters 1346–1485 · show in text ↑

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loss of function · nutrient: content · Cucumis sativus (cucumber)Positive and negative results

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  2. positive
  3. negative

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loss of function · molecular: expression · Cucumis sativus (cucumber)Positive and negative results

12 papers: 2 positive, 10 negative or no effect

9 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.