Paper · 2024 · Rice

Allantoate Amidohydrolase OsAAH is Essential for Preharvest Sprouting Resistance in Rice

Ting Xie; Wenling Hu; Jiaxin Shen; et al.

12
claims
24
verbatim quotes
7
citations
4
research areas
✓
Open access · cc-by

Abstract

Abstract Preharvest sprouting (PHS) is an undesirable trait that decreases yield and quality in rice production. Understanding the genes and regulatory mechanisms underlying PHS is of great significance for breeding PHS-resistant rice. In this study, we identified a mutant, preharvest sprouting 39 ( phs39 ), that exhibited an obvious PHS phenotype in the field. MutMap + analysis and transgenic experiments demonstrated that OsAAH , which encodes allantoate amidohydrolase, is the causal gene of phs39 and is essential for PHS resistance. OsAAH was highly expressed in roots and leaves at the heading stage and gradually increased and then weakly declined in the seed developmental stage. OsAAH protein was localized to the endoplasmic reticulum, with a function of hydrolyzing allantoate in vitro. Disruption of OsAAH increased the levels of ureides (allantoate and allantoin) and activated the tricarboxylic acid (TCA) cycle, and thus increased energy levels in developing seeds. Additionally, the disruption of OsAAH significantly increased asparagine, arginine, and lysine levels, decreased tryptophan levels, and decreased levels of indole-3-acetic acid (IAA) and abscisic acid (ABA). Our findings revealed that the OsAAH of ureide catabolism is involved in the regulation of rice PHS via energy and hormone metabolisms, which will help to facilitate the breeding of rice PHS-resistant varieties.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

The phs39 mutant exhibited preharvest sprouting in the field.

Material
preharvest sprouting 39 ( phs39 )e0
Outcome
obvious PHS phenotypee0
Setting
fielde0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“a mutant, preharvest sprouting 39 ( phs39 ), that exhibited an obvious PHS phenotype in the field”

✓ located verbatim in the source · abstract, characters 265–362 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MutMap+ and transgenic experiments identified OsAAH as the causal gene of phs39 and essential for PHS resistance.

Material
phs39e0
Gene
OsAAHe0
Outcome
PHS resistancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsAAH , which encodes allantoate amidohydrolase, is the causal gene of phs39 and is essential for PHS resistance”

✓ located verbatim in the source · abstract, characters 427–539 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsAAH expression was high in roots and leaves at heading.

Organ / stage
roots and leavese0
Gene
OsAAHe0
Outcome
highly expressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsAAH was highly expressed in roots and leaves at the heading stage”

✓ located verbatim in the source · abstract, characters 541–608 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsAAH expression rose and then weakly declined during seed development.

Organ / stage
seed developmental stagee0
Gene
OsAAHt0
Outcome
increased and then weakly declinede0
Direction
increased and then weakly declinede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“gradually increased and then weakly declined in the seed developmental stage”

✓ located verbatim in the source · abstract, characters 613–689 · show in text ↑
t0

“Allantoate Amidohydrolase OsAAH is Essential for Preharvest Sprouting Resistance in Rice”

✓ located verbatim in the source · title, characters 0–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsAAH protein localized to the endoplasmic reticulum.

Gene
OsAAH proteine0
Outcome
localized to the endoplasmic reticulume0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsAAH protein was localized to the endoplasmic reticulum”

✓ located verbatim in the source · abstract, characters 691–747 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsAAH hydrolyzed allantoate in vitro.

Gene
OsAAHt0
Outcome
hydrolyzing allantoatee0
Setting
in vitroe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“with a function of hydrolyzing allantoate in vitro”

✓ located verbatim in the source · abstract, characters 749–799 · show in text ↑
t0

“Allantoate Amidohydrolase OsAAH is Essential for Preharvest Sprouting Resistance in Rice”

✓ located verbatim in the source · title, characters 0–88 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of OsAAH increased ureide levels in developing seeds.

Treatment
Disruption of OsAAHe0
Gene
OsAAHe0
Outcome
levels of ureides (allantoate and allantoin)e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of OsAAH increased the levels of ureides (allantoate and allantoin)”

✓ located verbatim in the source · abstract, characters 801–879 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Disruption of OsAAH activated the TCA cycle.

Treatment
Disruption of OsAAHe0
Gene
OsAAHe0
Outcome
tricarboxylic acid (TCA) cyclee0
Direction
activatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of OsAAH increased the levels of ureides (allantoate and allantoin) and activated the tricarboxylic acid (TCA) cycle”

✓ located verbatim in the source · abstract, characters 801–928 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Disruption of OsAAH increased energy levels in developing seeds.

Organ / stage
developing seedse0
Treatment
Disruption of OsAAHe0
Gene
OsAAHe0
Outcome
energy levelse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Disruption of OsAAH increased the levels of ureides (allantoate and allantoin) and activated the tricarboxylic acid (TCA) cycle, and thus increased energy levels in developing seeds”

✓ located verbatim in the source · abstract, characters 801–982 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Disruption of OsAAH increased asparagine, arginine, and lysine levels.

Treatment
disruption of OsAAHe0
Gene
OsAAHe0
Outcome
asparagine, arginine, and lysine levelse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the disruption of OsAAH significantly increased asparagine, arginine, and lysine levels”

✓ located verbatim in the source · abstract, characters 998–1085 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 84–88 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of OsAAH decreased tryptophan levels.

Treatment
disruption of OsAAHe0
Gene
OsAAHt0
Outcome
tryptophan levelse0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the disruption of OsAAH significantly increased asparagine, arginine, and lysine levels, decreased tryptophan levels”

✓ located verbatim in the source · abstract, characters 998–1114 · show in text ↑
t0

“Allantoate Amidohydrolase OsAAH is Essential for Preharvest Sprouting Resistance in Rice”

✓ located verbatim in the source · title, characters 0–88 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Disruption of OsAAH decreased IAA and ABA levels.

Treatment
disruption of OsAAHe0
Gene
OsAAHt0
Outcome
levels of indole-3-acetic acid (IAA) and abscisic acid (ABA)e0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the disruption of OsAAH significantly increased asparagine, arginine, and lysine levels, decreased tryptophan levels, and decreased levels of indole-3-acetic acid (IAA) and abscisic acid (ABA)”

✓ located verbatim in the source · abstract, characters 998–1190 · show in text ↑
t0

“Allantoate Amidohydrolase OsAAH is Essential for Preharvest Sprouting Resistance in Rice”

✓ located verbatim in the source · title, characters 0–88 · show in text ↑

loss of function · physiology: hormones · Oryza sativa (rice)Positive and negative results

22 papers: 5 positive, 17 negative or no effect

16 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. positive
  3. positive

18 papers more in this group

See all 22 papers →

loss of function · molecular: metabolites · Oryza sativa (rice)Positive and negative results

71 papers: 18 positive, 53 negative or no effect

52 papers in the same direction as this paper · 18 in the opposite direction

  1. negative
  2. positive
  3. positive

67 papers more in this group

See all 71 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.