Paper · 2025 · Chemical and Biological Technologies in Agriculture

Temporal metabolomics of pea seedlings reveals primary and secondary metabolism dynamics under varying light intensity

Jong Sung Lee; Yu–Mi Shin; Ye Jin Kim; et al.

12
claims
26
verbatim quotes
2
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

Carbon metabolism in plants involves biochemical processes such as photosynthesis, respiration, and carbon partitioning. This study aimed to elucidate the physiological and biochemical dynamics during the early development of pea seedlings (Pisum sativum) across five time points (6, 9, 12, 15, and 18 days) and five cultivars (Dacheong, Daehyeop 1ho, Sanghyeop, Sacheol, and Cheongmi) using semi-targeted metabolic profiling. Furthermore, we investigated the interplay between photosynthetic activity and secondary metabolite accumulation by profiling the metabolic responses of Dacheong seedlings exposed to varying photosynthetic photon flux densities (PPFDs). A total of 83 metabolites were identified. Multivariate analysis revealed similar biochemical dynamics among the five cultivars during the early seedling stage. Metabolic shifts occurred in three distinct phases: (1) an early nitrogen-rich storage metabolism phase characterized by the accumulation of asparagine and raffinose, (2) an intermediate phase marked by the accumulation of branched-chain amino acids, flavonoids, and carotenoids, and (3) a late phase characterized by increased monosaccharides and chlorophylls. These findings suggest that seedling growth relies on the mobilization and conversion of carbohydrates stored in seeds prior to the development of photosynthetic organs. Notably, significant correlations were observed between the photosynthetic pigments and secondary metabolites. Among the cultivars, Dacheong (12 days) exhibited the highest total flavonoid content (33.40 ± 1.29 mg/g). The metabolic changes in Dacheong seedlings under varying PPFD conditions indicated that higher light intensity enhanced sucrose synthesis and chloroplast component composition. Additionally, carotenoid and flavonoid levels peaking at PPFD 400 µmol/m2·s suggested that this light intensity is the optimal condition for maximizing secondary metabolite accumulation through enhanced photosynthetic activity. This study is the first to profile the transition from heterotrophic to autotrophic growth in pea seedlings and reveal significant correlations between photosynthetic pigments and secondary metabolites during the seedling period. These findings provide insights into metabolic reprogramming in pea seedlings and inform strategies for enhancing their growth and nutritional quality. Future studies should include hormone analyses to further understand the metabolic transition processes in seedlings.

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Claims 12

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Semi-targeted profiling identified 83 metabolites.

Taxon
pea seedlingsLathyrus oleraceust0
Outcome
metabolitese0
Value
83 metabolitese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“A total of 83 metabolites were identified.”

✓ located verbatim in the source · abstract, characters 664–706 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Five cultivars showed similar biochemical dynamics early in seedling development.

Taxon
pea seedlingsLathyrus oleraceust0
Material
five cultivarse0
Organ / stage
early seedling stagee0
Outcome
similar biochemical dynamicse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Multivariate analysis revealed similar biochemical dynamics among the five cultivars during the early seedling stage.”

✓ located verbatim in the source · abstract, characters 707–824 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The early metabolic phase accumulated asparagine and raffinose.

Taxon
pea seedlingsLathyrus oleraceust0
Organ / stage
early nitrogen-rich storage metabolism phasee0
Outcome
accumulation of asparagine and raffinosee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“an early nitrogen-rich storage metabolism phase characterized by the accumulation of asparagine and raffinose”

✓ located verbatim in the source · abstract, characters 881–990 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The intermediate phase accumulated branched-chain amino acids, flavonoids, and carotenoids.

Taxon
pea seedlingsLathyrus oleraceust0
Organ / stage
intermediate phasee0
Outcome
accumulation of branched-chain amino acids, flavonoids, and carotenoidse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“an intermediate phase marked by the accumulation of branched-chain amino acids, flavonoids, and carotenoids”

✓ located verbatim in the source · abstract, characters 996–1103 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The late phase had increased monosaccharides and chlorophylls.

Taxon
pea seedlingsLathyrus oleraceust0
Organ / stage
late phasee0
Outcome
monosaccharides and chlorophyllse0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“a late phase characterized by increased monosaccharides and chlorophylls”

✓ located verbatim in the source · abstract, characters 1113–1185 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Seedling growth appears to rely on mobilizing and converting seed carbohydrates before photosynthetic organs develop.

Taxon
pea seedlingsLathyrus oleraceust0
Outcome
seedling growthe0
Qualifier
mobilization and conversion of carbohydrates stored in seedse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“seedling growth relies on the mobilization and conversion of carbohydrates stored in seeds prior to the development of photosynthetic organs”

✓ located verbatim in the source · abstract, characters 1215–1355 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Photosynthetic pigments and secondary metabolites were significantly correlated.

Taxon
pea seedlingsLathyrus oleraceust0
Compound
secondary metabolitese0
Outcome
photosynthetic pigmentse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“significant correlations were observed between the photosynthetic pigments and secondary metabolites”

✓ located verbatim in the source · abstract, characters 1366–1466 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Dacheong at 12 days had the highest total flavonoid content of 33.40 ± 1.29 mg/g.

Taxon
pea seedlingsLathyrus oleraceust0
Material
Dacheonge0
Organ / stage
12 dayse0
Outcome
total flavonoid contente0
Direction
higheste0
Value
33.40 ± 1.29 mg/ge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Dacheong (12 days) exhibited the highest total flavonoid content (33.40 ± 1.29 mg/g)”

✓ located verbatim in the source · abstract, characters 1489–1573 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Higher light intensity enhanced sucrose synthesis in Dacheong seedlings.

Taxon
pea seedlingsLathyrus oleraceust0
Material
Dacheonge1
Treatment
higher light intensitye0
Outcome
sucrose synthesise0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“higher light intensity enhanced sucrose synthesis and chloroplast component composition”

✓ located verbatim in the source · abstract, characters 1664–1751 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
e1

“metabolic responses of Dacheong seedlings exposed to varying photosynthetic photon flux densities (PPFDs)”

✓ located verbatim in the source · abstract, characters 557–662 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Higher light intensity enhanced chloroplast component composition in Dacheong seedlings.

Taxon
pea seedlingsLathyrus oleraceust0
Material
Dacheonge1
Treatment
higher light intensitye0
Outcome
chloroplast component compositione0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“higher light intensity enhanced sucrose synthesis and chloroplast component composition”

✓ located verbatim in the source · abstract, characters 1664–1751 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
e1

“metabolic responses of Dacheong seedlings exposed to varying photosynthetic photon flux densities (PPFDs)”

✓ located verbatim in the source · abstract, characters 557–662 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Carotenoid and flavonoid levels peaked at PPFD 400 µmol/m2·s.

Taxon
pea seedlingsLathyrus oleraceust0
Treatment
PPFD 400 µmol/m2·se0
Outcome
carotenoid and flavonoid levelse0
Direction
peakinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“carotenoid and flavonoid levels peaking at PPFD 400 µmol/m2·s”

✓ located verbatim in the source · abstract, characters 1767–1828 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors identify PPFD 400 µmol/m2·s as optimal for secondary metabolite accumulation.

Taxon
pea seedlingsLathyrus oleraceust0
Outcome
optimal condition for maximizing secondary metabolite accumulatione0
Qualifier
enhanced photosynthetic activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“this light intensity is the optimal condition for maximizing secondary metabolite accumulation through enhanced photosynthetic activity”

✓ located verbatim in the source · abstract, characters 1844–1979 · show in text ↑
t0

“pea seedlings”

✓ located verbatim in the source · title, characters 25–38 · show in text ↑

light · molecular: metabolites · Lathyrus oleraceus (pea)Positive and negative results

49 papers: 26 positive, 23 negative or no effect

25 papers in the same direction as this paper · 20 in the opposite direction · 3 reporting no difference from an alternative

  1. negative
  2. no effect
  3. negative

45 papers more in this group

See all 49 papers →

light · quality: general · Lathyrus oleraceus (pea)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.