Paper · 2025 · Plant Communications

The transcription factor OsMADS61 positively regulates root elongation and nitrogen use efficiency in rice

Daojian Wang; Zhihao Liang; Changxiao Gu; et al.

6
claims
12
verbatim quotes
0
citations
4
research areas
✓
Open access

Abstract

Plant roots have evolved adaptive strategies mediated by transcriptional networks to cope with fluctuating nitrogen (N) forms and availability. However, the mechanisms linking root-foraging responses to N use efficiency (NUE) in crops remain poorly understood. Here, we show that rice exhibits enhanced root elongation under nitrate compared with ammonium, particularly under low N supply, suggesting a specific regulatory role for nitrate in root morphogenesis. We identify the transcription factor OsMADS61 as a key regulator of nitrate-dependent root morphological and physiological responses, as well as NUE, especially under N-limited conditions. OsMADS61 acts as a transcriptional activator of nitrate metabolism by directly binding to OsNRT2.1 and OsNR2 promoters. Nitric oxide produced via the nitrate reductase pathway, under the control of nitrate-responsive OsMADS61, precisely triggers cell proliferation in the root meristem. Moreover, single-nucleotide polymorphisms in the OsMADS61 promoter may be associated with differential root-foraging responses to nitrate availability. Therefore, enhancing N-adaptive root responses to optimize N uptake and assimilation represents a promising strategy for breeding crops with high NUE.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rice roots elongated more under nitrate than ammonium, especially with low nitrogen.

Treatment
nitratee0e1
Outcome
root elongatione0e1
Direction
enhancede0e1
Qualifier
low N supplye0e1
Comparator
ammoniume0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“rice exhibits enhanced root elongation under nitrate compared with ammonium, particularly under low N supply”

✓ located verbatim in the source · abstract, characters 280–388 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

OsMADS61 regulates nitrate-dependent root morphology and physiology and NUE under nitrogen limitation.

Gene
OsMADS61e0e1
Outcome
root morphological and physiological responses, as well as NUEe0e1
Qualifier
under N-limited conditionse0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsMADS61 as a key regulator of nitrate-dependent root morphological and physiological responses, as well as NUE, especially under N-limited conditions”

✓ located verbatim in the source · abstract, characters 500–650 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

OsMADS61 activates nitrate metabolism by directly binding OsNRT2.1 and OsNR2 promoters.

Gene
OsMADS61e0e1
Outcome
nitrate metabolisme0e1
Qualifier
directly binding to OsNRT2.1 and OsNR2 promoterse0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsMADS61 acts as a transcriptional activator of nitrate metabolism by directly binding to OsNRT2.1 and OsNR2 promoters”

✓ located verbatim in the source · abstract, characters 652–770 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Nitrate-reductase-derived nitric oxide triggers cell proliferation in the root meristem under OsMADS61 control.

Organ / stage
root meristeme0e1
Gene
OsMADS61e0e1
Compound
Nitric oxidee0e1
Outcome
cell proliferatione0e1
Direction
triggerse0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Nitric oxide produced via the nitrate reductase pathway, under the control of nitrate-responsive OsMADS61, precisely triggers cell proliferation in the root meristem”

✓ located verbatim in the source · abstract, characters 772–937 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

OsMADS61 promoter polymorphisms may be associated with differing root responses to nitrate.

Gene
OsMADS61e0e1
Outcome
root-foraging responsese0e1
Direction
differentiale0e1
Qualifier
nitrate availabilitye0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“single-nucleotide polymorphisms in the OsMADS61 promoter may be associated with differential root-foraging responses to nitrate availability”

✓ located verbatim in the source · abstract, characters 949–1089 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose enhancing nitrogen-adaptive roots as a breeding strategy for high NUE.

Taxon
cropse0e1
Outcome
high NUEe0e1
Qualifier
enhancing N-adaptive root responses to optimize N uptake and assimilatione0e1

Verbatim

e0

“enhancing N-adaptive root responses to optimize N uptake and assimilation represents a promising strategy for breeding crops with high NUE”

✓ located verbatim in the source · abstract, characters 1102–1240 · show in text ↑
e1

“rice exhibits enhanced root elongation”

✓ located verbatim in the source · abstract, characters 280–318 · show in text ↑

nitrogen · growth · Oryza sativa (rice)Positive and negative results

511 papers: 402 positive, 109 negative or no effect

401 papers in the same direction as this paper · 101 in the opposite direction · 8 reporting no difference from an alternative

  1. negative
  2. negative
  3. negative

507 papers more in this group

See all 511 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.