Paper · 2026 · Horticultural Plant Journal

An integrated analysis with transcriptomics and metabolomics highlights VdMYB56 regulation anthocyanin biosynthesis in rabbiteye blueberry (Vaccinium ashei)

Lin Deng; Luonan Shen; Huiying Chong; et al.

10
claims
19
verbatim quotes
3
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

Blueberry ( Vaccinium ashei ) is highly characterized by its nutritional value, with an extremely high anthocyanin content, and rabbiteye blueberry is widely grown across China. However, molecular regulatory mechanisms underlying the high anthocyanin accumulation during the fruit development and colouration of rabbiteye blueberry fruit, have not yet been fully clarified so far. The fruit anthocyanin content of rabbiteye blueberry in the karstic area of Guizhou Province, China, is much higher compared to that in other regions, and the fruit colour is highly affected by anthocyanin accumulation. Currently, the untargeted metabolomics and HPLC assays have been carried out using rabbiteye blueberry fruit at various stages, and it was investigated that cyanidin (Cy) and pelargonidin (Pg) reached their peaks at the red fruit (RF) stage, whereas delphinidin (Dp), petudinin (Pt), malvidin (Mv), and peonidin (Pn) got their ceilings at the mature fruit (MF) stage. Transcriptome and co-expression network analyses showed that 27 differentially expressed genes (DEGs) were associated with anthocyanin content, among which VdMYB56, belonging to the R2R3-MYB family, was markedly up-regulated during the development and colouration of fruit, and was significantly higher in the skin than in the pulp. Furthermore, VdMYB56 -overexpressing tomato fruits demonstrated a substantial elevation in anthocyanin content on the 35 th day after flowering (DAF). It was worth noting that VdMYB56 could directly bind to the promoter of Vd3GT to enhance its expression, thereby further strengthening the anthocyanin accumulation. Meantime, multiple assays verified that VdMYB69, an R2R3-MYB member, might interact with VdMYB56, leading to the promotion of VdMYB56 expression. Conclusively, the VdMYB56-VdMYB69 module is a positive regulator of anthocyanin biosynthesis in rabbiteye blueberry, which may provide new insights into high-anthocyanin breeding, particularly for the southern karstic regions.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Fruit anthocyanin content was higher in Guizhou karst than other regions.

Taxon
rabbiteye blueberrye0
Outcome
fruit anthocyanin contente0
Direction
much highere0
Comparator
other regionse0
Setting
Guizhou Province, Chinae0

Verbatim

e0

“The fruit anthocyanin content of rabbiteye blueberry in the karstic area of Guizhou Province, China, is much higher compared to that in other regions”

✓ located verbatim in the source · abstract, characters 381–530 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fruit colour was strongly affected by anthocyanin accumulation.

Taxon
rabbiteye blueberryt0
Compound
anthocyanine0
Outcome
fruit coloure0

Not reportedDirection

Verbatim

e0

“the fruit colour is highly affected by anthocyanin accumulation”

✓ located verbatim in the source · abstract, characters 536–599 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cyanidin and pelargonidin peaked at the red fruit stage.

Taxon
rabbiteye blueberryt0
Organ / stage
red fruit (RF) stagee0
Outcome
cyanidin (Cy) and pelargonidin (Pg)e0
Direction
peakse0

Verbatim

e0

“cyanidin (Cy) and pelargonidin (Pg) reached their peaks at the red fruit (RF) stage”

✓ located verbatim in the source · abstract, characters 758–841 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Delphinidin, petudinin, malvidin and peonidin peaked at mature fruit stage.

Taxon
rabbiteye blueberryt0
Organ / stage
mature fruit (MF) stagee0
Outcome
delphinidin (Dp), petudinin (Pt), malvidin (Mv), and peonidin (Pn)e0
Direction
ceilingse0

Verbatim

e0

“delphinidin (Dp), petudinin (Pt), malvidin (Mv), and peonidin (Pn) got their ceilings at the mature fruit (MF) stage”

✓ located verbatim in the source · abstract, characters 851–967 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Twenty-seven differentially expressed genes were associated with anthocyanin content.

Taxon
rabbiteye blueberryt0
Gene
differentially expressed genes (DEGs)e0
Outcome
anthocyanin contente0
Value
27e0

Not reportedDirection

Verbatim

e0

“27 differentially expressed genes (DEGs) were associated with anthocyanin content”

✓ located verbatim in the source · abstract, characters 1030–1111 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

VdMYB56 was upregulated during fruit development and colouration.

Taxon
rabbiteye blueberryt0
Organ / stage
fruite0
Gene
VdMYB56e0
Outcome
VdMYB56e0
Direction
up-regulatede0

Verbatim

e0

“VdMYB56, belonging to the R2R3-MYB family, was markedly up-regulated during the development and colouration of fruit”

✓ located verbatim in the source · abstract, characters 1125–1241 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

VdMYB56 expression was higher in skin than pulp.

Taxon
rabbiteye blueberryt0
Organ / stage
skine0
Gene
VdMYB56e1
Outcome
VdMYB56e1
Direction
highere0
Comparator
pulpe0

Verbatim

e0

“was significantly higher in the skin than in the pulp”

✓ located verbatim in the source · abstract, characters 1247–1300 · show in text ↑
e1

“VdMYB56, belonging to the R2R3-MYB family”

✓ located verbatim in the source · abstract, characters 1125–1166 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

VdMYB56 overexpression increased anthocyanin in tomato fruit at 35 days after flowering.

Organ / stage
tomato fruitse0
Treatment
VdMYB56 -overexpressinge0
Gene
VdMYB56e0
Outcome
anthocyanin contente0
Direction
elevatione0
Qualifier
35 th day after flowering (DAF)e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“VdMYB56 -overexpressing tomato fruits demonstrated a substantial elevation in anthocyanin content on the 35 th day after flowering (DAF)”

✓ located verbatim in the source · abstract, characters 1315–1451 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

VdMYB56 bound the Vd3GT promoter and enhanced its expression and anthocyanin accumulation.

Taxon
rabbiteye blueberryt0
Gene
VdMYB56e0
Outcome
anthocyanin accumulatione0
Direction
strengtheninge0

Verbatim

e0

“VdMYB56 could directly bind to the promoter of Vd3GT to enhance its expression, thereby further strengthening the anthocyanin accumulation”

✓ located verbatim in the source · abstract, characters 1478–1616 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

VdMYB69 may interact with VdMYB56 and promote VdMYB56 expression.

Taxon
rabbiteye blueberryt0
Gene
VdMYB69e0
Outcome
VdMYB56 expressione0
Direction
promotione0

Verbatim

e0

“VdMYB69, an R2R3-MYB member, might interact with VdMYB56, leading to the promotion of VdMYB56 expression”

✓ located verbatim in the source · abstract, characters 1658–1762 · show in text ↑
t0

“rabbiteye blueberry (Vaccinium ashei)”

✓ located verbatim in the source · title, characters 119–156 · show in text ↑