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Observationobservedoriginal resultmeasured

Claim · model-written summary

The leaf sheath transcriptome changes dynamically during maturation.

Taxon
MaizeZea mayst0
Organ / stage
leaf sheathe0
Outcome
leaf sheath transcriptomee0

Verbatim

e0

“the leaf sheath transcriptome dynamically changes during maturation”

✓ located verbatim in the source · abstract, characters 496–563
t0

“Maize”

✓ located verbatim in the source · title, characters 53–58

Title

Transcriptomic Analysis of Leaf Sheath Maturation in Maize

Lei Dong; Lei Qin; Xiuru Dai; et al. International Journal of Molecular Sciences 2019. doi:10.3390/ijms20102472

Other claims from this paper (4)
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

The mitochondrial transcriptome did not show major changes during leaf aging.

Outcome
mitochondrial transcriptomee0

Not reportedTaxonDirection

Verbatim

e0

“The chloroplast transcriptome, but not the mitochondrial transcriptome, showed major changes during leaf aging”

✓ located verbatim in the source · abstract, characters 687–797

Title

Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis1 

Hye Ryun Woo; Hee Jung Koo; Jeongsik Kim; et al. PLANT PHYSIOLOGY 2016. doi:10.1104/pp.15.01929

Other claims from this paper (3)
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast transcriptome changed substantially during leaf aging.

Organ / stage
leafe0
Outcome
chloroplast transcriptomee0
Direction
major changese0

Not reportedTaxon

Verbatim

e0

“The chloroplast transcriptome, but not the mitochondrial transcriptome, showed major changes during leaf aging”

✓ located verbatim in the source · abstract, characters 687–797

Title

Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis1 

Hye Ryun Woo; Hee Jung Koo; Jeongsik Kim; et al. PLANT PHYSIOLOGY 2016. doi:10.1104/pp.15.01929

Other claims from this paper (3)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Leaf transcriptome and gene repertoire analyses identified genetic changes associated with prey attraction and capture.

Taxon
CephalotusCephalotust0
Organ / stage
leafe0
Outcome
prey attraction, capturee0

Not reportedGeneDirection

Verbatim

e0

“Transcriptome comparison of the two leaf types and gene repertoire analysis identified genetic changes associated with prey attraction, capture, digestion and nutrient absorption.”

✓ located verbatim in the source · abstract, characters 404–583
t0

“Cephalotus”

✓ located verbatim in the source · title, characters 28–38

Title

Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory

Kenji Fukushima; Xiaodong Fang; David Alvarez-Ponce; et al. Nature Ecology & Evolution 2017. doi:10.1038/s41559-016-0059

Other claims from this paper (5)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Leaf transcriptome and gene repertoire analyses identified genetic changes associated with digestion and nutrient absorption.

Taxon
CephalotusCephalotust0
Organ / stage
leafe0
Outcome
digestion and nutrient absorptione0

Not reportedDirection

Verbatim

e0

“Transcriptome comparison of the two leaf types and gene repertoire analysis identified genetic changes associated with prey attraction, capture, digestion and nutrient absorption.”

✓ located verbatim in the source · abstract, characters 404–583
t0

“Cephalotus”

✓ located verbatim in the source · title, characters 28–38

Title

Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory

Kenji Fukushima; Xiaodong Fang; David Alvarez-Ponce; et al. Nature Ecology & Evolution 2017. doi:10.1038/s41559-016-0059

Other claims from this paper (5)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Continuous leaf transcriptome profiling in rice uncovered two major drastic changes in the leaf transcriptional program

Organ / stage
leafe2
Outcome
two major drastic changes in the leaf transcriptional programe2
Value
twoe2
Qualifier
from transplanting until harvestinge2

Verbatim

e0

“a high-resolution transcriptome analysis of rice was conducted”

✓ located verbatim in the source · abstract, characters 405–467
e2

“Continuous transcriptome profiling of leaf from transplanting until harvesting further elucidated the growth-stage specificity of gene expression and uncovered two major drastic changes in the leaf transcriptional program”

✓ located verbatim in the source · abstract, characters 795–1016

Title

Field transcriptome revealed critical developmental and physiological transitions involved in the expression of growth potential in japonicarice

Yutaka Sato; Baltazar Antonio; Nobukazu Namiki; et al. BMC Plant Biology 2011. doi:10.1186/1471-2229-11-10

Other claims from this paper (8)
Associationobservedoriginal resultmeasured

Claim · model-written summary

The transcriptome tracked zone-specific sucrose changes.

Taxon
maizeZea mayst0
Organ / stage
zone-specific changes in Suce0
Outcome
transcriptomee0

Not reportedDirection

Verbatim

e0

“The global metabolome and transcriptome track these zone-specific changes in Suc”

✓ located verbatim in the source · abstract, characters 948–1028
t0

“maize”

✓ located verbatim in the source · title, characters 87–92

Title

The interplay between carbon availability and growth in different zones of the growing maize leaf

Angelika B. Czedik-Eysenberg; Stéphanie Arrivault; Marc A. Lohse; et al. PLANT PHYSIOLOGY 2016. doi:10.1104/pp.16.00994

Other claims from this paper (10)
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Extended severe stress caused more drastic leaf transcriptome changes in rhl1.a than WT.

Material
rhl1.ae0
Organ / stage
leavese0
Treatment
An extended period of severe stresse0
Outcome
transcriptome changese0
Direction
more drastice0
Comparator
WTe0

Verbatim

e0

“An extended period of severe stress caused more drastic transcriptome changes in the roots and leaves of the rhl1.a mutant than in those of the WT.”

✓ located verbatim in the source · abstract, characters 1078–1225
e2

“wild-type (WT) barley cultivar”

✓ located verbatim in the source · abstract, characters 190–220

Title

Transcriptome analysis reveals the role of the root hairs as environmental sensors to maintain plant functions under water-deficiency conditions

Miroslaw Kwasniewski; Agata Daszkowska-Golec; Agnieszka Janiak; et al. Journal of Experimental Botany 2015. doi:10.1093/jxb/erv498

Other claims from this paper (6)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Cadmium transcriptome results agreed with observed physiological changes.

Taxon
Salix matsudana Koidz.Salix matsudanae1
Treatment
Cde0
Outcome
Cd transcriptome resultse0
Qualifier
consistent with observed physiological changese0

Not reportedDirection

Verbatim

e0

“The Cd transcriptome results were consistent with observed physiological changes”

✓ located verbatim in the source · abstract, characters 967–1047
e1

“Salix matsudana Koidz.”

✓ located verbatim in the source · abstract, characters 12–34

Title

Characterization of early transcriptional responses to cadmium in the root and leaf of Cd-resistant Salix matsudana Koidz

Jingli Yang; Kun Li; Wei Zheng; et al. BMC Genomics 2015. doi:10.1186/s12864-015-1923-4

Other claims from this paper (4)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Arabidopsis leaf transcriptomes changed extensively during development.

Taxon
ArabidopsisArabidopsist0
Organ / stage
leaft0
Outcome
Transcriptome profilinge0
Direction
extensive changese0

Verbatim

e0

“Transcriptome profiling showed extensive changes during leaf development.”

✓ located verbatim in the source · abstract, characters 680–753
t0

“Arabidopsis leaf development”

✓ located verbatim in the source · title, characters 74–102

Title

Identification and characterization of ncRNA-associated ceRNA networks in Arabidopsis leaf development

Xianwen Meng; Peijing Zhang; Qi Chen; et al. BMC Genomics 2018. doi:10.1186/s12864-018-4993-2

Other claims from this paper (5)

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