Search claims · PlantClaims

Mechanismobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Chromatin changes caused changes in root development gene expression.

Taxon: Nicotiana tabacumNicotiana tabacumt0
Outcome: expression of numerous genese0
Qualifier: Structural changes in chromatine0

Not reportedDirection

Verbatim

e0
“Structural changes in chromatin caused significant changes in the expression of numerous genes associated with the development and differentiation of the root system.”
✓ located verbatim in the source · abstract, characters 1406–1572

t0
“Nicotiana tabacum”
✓ located verbatim in the source · title, characters 53–70

Title

Elongating Effect of the Peptide AEDL on the Root of Nicotiana tabacum under Salinity

Larisa I. Fedoreyeva; Ekaterina N. Baranova; Inn A. Chaban; et al. Plants 2022. doi:10.3390/plants11101352

Other claims from this paper (12)

Intervention effect AEDL at 10−7 M elongated seedling root cells.
Intervention effect Salt distorted root development and architecture.
Intervention effect AEDL with salt permitted normal root development.
Observation Reactive oxygen species were detected in AEDL treated root elongation and hair zones.
Intervention effect AEDL reduced ROS marker fluorescence relative to no peptide.
Mechanism AEDL protected roots against salt-associated oxidative damage.
Observation AEDL localization at roots was tissue specific.
Observation FITC-AEDL localized mostly in elongation and root hair zones, with little in meristem.
Intervention effect AEDL changed chromatin structural organization.
Intervention effect AEDL decreased WOX family gene expression.
Mechanism AEDL increased stem cell differentiation and root elongation.
Mechanism Under salt, root elongation involved expansin family genes that weaken cell walls.

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

4CL genes showed significant expression changes.

Taxon: cabbageBrassica oleracea var. capitatae1
Gene: 4CL genese0
Outcome: expression changese0

Verbatim

e0
“significant expression changes of 4CL genes”
✓ located verbatim in the source · abstract, characters 672–715

e1
“cabbage (Brassica oleracea var. capitata)”
✓ located verbatim in the source · abstract, characters 309–350

Title

Multi-Time Point Transcriptome Analysis and Functional Validation Revealed Bol4CL41 Negatively Regulates Black Rot Resistance in Cabbage

Hongxue Ma; Siping Deng; Congcong Kong; et al. International Journal of Molecular Sciences 2025. doi:10.3390/ijms26136179

Other claims from this paper (7)

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Both identified genes had significant expression changes under salt stress.

Taxon: Spartina alternifloraSporobolus alterniflorust0
Treatment: salt stresse0
Outcome: expression changese0

Not reportedDirection

Verbatim

e0
“Both genes exhibited significant expression changes under salt stress”
✓ located verbatim in the source · abstract, characters 1141–1210

t0
“Spartina alterniflora”
✓ located verbatim in the source · title, characters 96–117

Title

High-throughput yeast screening and transcriptomic integration identify salt-tolerance genes in Spartina alterniflora

Jiahui Geng; Shoukun Chen; Shoukun Chen; et al. Current Plant Biology 2025. doi:10.1016/j.cpb.2025.100564

Other claims from this paper (10)

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Chloroplast and mitochondrial perturbations triggered highly overlapping gene expression changes.

Taxon: ArabidopsisArabidopsist0
Treatment: chloroplast and mitochondrial perturbationse0
Outcome: gene expression changese0

Not reportedDirection

Verbatim

e0
“highly significant overlap between gene expression changes triggered by chloroplast and mitochondrial perturbations”
✓ located verbatim in the source · abstract, characters 863–978

t0
“Arabidopsis”
✓ located verbatim in the source · title, characters 126–137

Title

Comparison of Transcriptional Changes to Chloroplast and Mitochondrial Perturbations Reveals Common and Specific Responses in Arabidopsis

Olivier Van Aken; James Whelan Frontiers in Plant Science 2012. doi:10.3389/fpls.2012.00281

Other claims from this paper (6)

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Os08g0431900 expression changes significantly correlated with hypoxia resistance.

Taxon: riceOryza sativat0
Gene: Os08g0431900e0
Outcome: expression changes correlating with hypoxia resistancee0

Not reportedDirection

Verbatim

e0
“Os08g0431900 displayed significant expression changes correlating with hypoxia resistance.”
✓ located verbatim in the source · abstract, characters 1687–1777

t0
“Rice”
✓ located verbatim in the source · title, characters 74–78

Title

Identification of Quantitative Trait Loci and Candidate Genes Involved in Rice Seedling Growth Under Hypoxic Stress

Nari Kim; Rahmatullah Jan; Saleem Asif; et al. International Journal of Molecular Sciences 2025. doi:10.3390/ijms262110420

Other claims from this paper (11)

Observation Cheongcheong and CNDH13, CNDH35 and CNDH91 showed strong hypoxia tolerance.
Observation Nagdong and CNDH14-2, CNDH43 and CNDH50-1 were susceptible to hypoxia.
Intervention effect Hypoxia did not affect rice root length.
Association Shoot length and fresh weight were key indicators of rice hypoxia tolerance.
Association qSL-8 and qSL-10 were associated with shoot length under hypoxia.
Association qFW-2 was associated with fresh weight under hypoxia.
Observation Thirty-five candidate genes in QTL regions showed differential regulation under hypoxia.
Observation Four named candidate genes were upregulated under hypoxia in resistant and susceptible rice lines.
Observation Four named candidate genes were downregulated under hypoxia in resistant and susceptible rice lines.
Observation Os08g0431900 was highly conserved.
Observation Os08g0431900 interacted with stress-response proteins.

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Transcriptomic profiling identified 734 genes with significant expression changes.

Taxon: Simarouba glaucaSimarouba glaucat0
Gene: genese0
Outcome: genes with significant expression changese0
Value: 734e0

Verbatim

e0
“identified 734 genes with significant expression changes”
✓ located verbatim in the source · abstract, characters 946–1002

t0
“Simarouba glauca”
✓ located verbatim in the source · title, characters 53–69

Title

Untargeted metabolomics-based study of extracts from Simarouba glauca plant parts for insecticidal effects against Spodoptera frugiperda

Komala G; Shanthi Mookiah; Murugan Marimuthu; et al. Scientific Reports 2025. doi:10.1038/s41598-025-01605-y

Other claims from this paper (8)

Observation Simarouba seeds yielded the highest extract recovery in n-hexane.
Observation Ethyl acetate bark extract had the lowest LC₅₀, 4.80%, against Spodoptera frugiperda.
Intervention effect Cold-pressed seed oil inhibited feeding by over 52.3% at elevated concentrations.
Observation Gamma-sitosterol was identified among key metabolites in plant extracts.
Observation Lanosta-8,24-dien-3-one was identified among key metabolites in plant extracts.
Observation Bark extracts had distinct metabolic signatures.
Observation Docking indicated strong ligand interactions with cytochrome P450.
Observation Docking indicated strong ligand interactions with odorant-binding proteins.

Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Gene expression changes were significant at 96HAP, coinciding with considerable sepal development.

Taxon: spinachSpinacia oleraceat0
Organ / stage: sepale0
Outcome: changes in gene expressione0
Direction: changese0

Verbatim

e0
“significant changes in gene expression occurred at 96HAP when there is considerable sepal development”
✓ located verbatim in the source · abstract, characters 1391–1492

t0
“spinach”
✓ located verbatim in the source · title, characters 115–122

Title

Post-pollination sepal longevity of female flower co-regulated by energy-associated multiple pathways in dioecious spinach

Xiaokai Ma; Mahpara Fatima; Jing Li; et al. Frontiers in Plant Science 2022. doi:10.3389/fpls.2022.1010149

Other claims from this paper (7)

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Functional annotation showed significant changes in metabolism, signalling, and transcription-factor expression.

Taxon: Medicago truncatulaMedicago truncatulat0
Outcome: changes in metabolism, signalling and the expression of transcription factorse0

Not reportedDirection

Verbatim

e0
“This showed significant changes in metabolism, signalling and the expression of transcription factors”
✓ located verbatim in the source · abstract, characters 1226–1327

t0
“Medicago truncatula”
✓ located verbatim in the source · title, characters 62–81

Title

Global gene expression analysis of in vitro root formation in Medicago truncatula

Peta Holmes; Michael A. Djordjevic; Nijat Imin Functional Plant Biology 2010. doi:10.1071/fp10159

Other claims from this paper (8)

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Both biostimulants caused significant gene expression changes within 24 hours.

Taxon: tomatoSolanum lycopersicumt0
Treatment: Both biostimulantse0
Outcome: gene expression changese0
Value: 24 he0

Verbatim

e0
“Both biostimulants induced significant gene expression changes within 24 h”
✓ located verbatim in the source · abstract, characters 1412–1486

t0
“tomato”
✓ located verbatim in the source · title, characters 33–39

Title

Transcriptional reprogramming of tomato (Solanum lycopersicum L.) roots treated with humic acids and filter sterilized compost tea

Riccardo Scotti; Nunzio D’Agostino; Catello Pane; et al. BMC Plant Biology 2024. doi:10.1186/s12870-024-05602-7

Other claims from this paper (7)

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Transcriptome analysis found significant changes in WRKY gene family expression.

Gene: WRKY gene familye0
Outcome: expression levelse0
Direction: changese0

Not reportedTaxon

Verbatim

e0
“Transcriptome analysis revealed significant changes in the expression levels of the WRKY gene family.”
✓ located verbatim in the source · abstract, characters 597–698

Title

Transcriptome analysis and genome-wide identification of WRKY gene family in Leonurus japonicus under drought stress

Tongtong Guo; Qing Wang; Yuxiao Yi; et al. BMC Plant Biology 2025. doi:10.1186/s12870-025-06606-7

Other claims from this paper (13)

Intervention effect Drought stress significantly increased malondialdehyde content in L. japonicus.
Intervention effect Drought stress significantly increased proline content in L. japonicus.
Intervention effect Drought stress significantly increased hydrogen peroxide content in L. japonicus.
Method / resource Bioinformatics identified 67 LjWRKY genes in the L. japonicus genome.
Observation The LjWRKY amino acid lengths ranged from 85 to 574.
Observation LjWRKY genes were divided into three subfamilies.
Observation LjWRKY 1, 4, 23 and 44 expression was significantly up-regulated under drought stress.
Observation LjWRKY 21, 25 and 65 expression was significantly down-regulated under drought stress.
Observation After drought stress, differentially expressed genes were enriched in plant hormone signaling.
Observation After drought stress, differentially expressed genes were enriched in MAPK signaling.
Observation After drought stress, differentially expressed genes were enriched in secondary metabolite biosynthesis.
Observation The MAPK pathway contained 19 differentially expressed genes.
Observation Nine MAPK pathway differentially expressed genes contained W-box regions.

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