By interacting organism › Bacteria › Methylophilaceae › Methylophilus

Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

MRGs harbored by PGPB in rice could be acquired by horizontal gene transfer from atmospheric microbes such as Methylophilus and Serratia.

Taxon: riceOryza sativat0
Interactor: MethylophilusMethylophiluse6other
Second interactor: Serratiae6other
Outcome: MRGs harbored by PGPBe6
Qualifier: could also be acquired via horizontal gene transfer (HGT)e6

Verbatim

t0
“(PGPB) in rice”
✓ located verbatim in the source · title, characters 121–135

e6
“MRGs harbored by PGPB in rice could also be acquired via horizontal gene transfer (HGT) from environmental or seed-borne MRG-PGPB, particularly from atmospheric microbes such as Methylophilus and Serratia”
✓ located verbatim in the source · abstract, characters 1386–1590

Title

Seed-borne and environmental transmission mechanisms drive diverse heavy metal-resistant plant growth-promoting bacteria (PGPB) in rice

Jie Hou; Mengqi Liu; Ye Li; et al. Environment International 2025. doi:10.1016/j.envint.2025.109840

Other claims from this paper (7)

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Methylophilus, Massilia and Bradyrhizobium were enriched in transgenic plant rhizospheres.

Taxon: Nicotiana benthamianaNicotiana benthamianat0
Interactor: Methylophilus , Massilia and BradyrhizobiumMethylophilusBradyrhizobiumMassiliae0other
Outcome: rhizosphere microbial communitye0
Direction: enrichede0

Verbatim

e0
“Pb-tolerant microbes such as genera Methylophilus , Massilia and Bradyrhizobium were enriched in the rhizosphere microbial community of transgenic plants”
✓ located verbatim in the source · abstract, characters 1166–1319

t0
“Nicotiana benthamiana”
✓ located verbatim in the source · title, characters 154–175

Title

Co-expression of Cassia tora 1-deoxy-D-xylulose-5-phosphate synthase and 1-deoxy-D-xylulose-5-phosphate reductoisomerase enhances tolerance of transgenic Nicotiana benthamiana to lead (Pb) stress

Xue Huang; Chunyao Tian; Zichun Ma; et al. Frontiers in Plant Science 2025. doi:10.3389/fpls.2025.1657368

Other claims from this paper (8)

Observation Lead acetate upregulated CtDXS1 and CtDXR1 transcription in Cassia tora.
Intervention effect Transgenic coexpressing lines had more endogenous ABA than wild type under Pb stress.
Intervention effect Transgenic lines had higher antioxidant enzyme activity than wild type under Pb stress.
Intervention effect Transgenic lines had lower MDA and hydrogen peroxide content than wild type under Pb stress.
Intervention effect Transgenic lines had lower Pb uptake than wild type.
Observation Heavy metal tolerance gene transcripts increased in transgenic plants.
Observation AUX1 and CP1 were identified as potential nodes in Pb tolerance signaling.
Mechanism The authors conclude that MEP-pathway-mediated ABA accumulation confers Pb tolerance.

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Methylophilus sequences were statistically more abundant in maize-cultivated libraries than in fallow soils.

Taxon: maizeZea mayse1
Treatment: maize-cultivated librariese2
Interactor: MethylophilusMethylophiluse2symbiont
Outcome: number of sequences corresponding to main generae2
Direction: more abundante2
Comparator: fallow soilse2

Verbatim

e1
“roots of maize (Zea mays L.) plants”
✓ located verbatim in the source · abstract, characters 53–88

e2
“The number of sequences corresponding to main genera Sphingomonas, Herbaspirillum, Bradyrhizobium and Methylophilus in the maize-cultivated libraries were statistically more abundant than those from the fallow soils”
✓ located verbatim in the source · abstract, characters 938–1153

Title

Maize Endophytic Bacterial Diversity as Affected by Soil Cultivation History

David Correa-Galeote; Eulogio J. Bedmar; Gregorio J. Arone Frontiers in Microbiology 2018. doi:10.3389/fmicb.2018.00484

Other claims from this paper (10)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The core phyllosphere microbiome of the floating macrophyte contained genera such as Acidovorax, Asticcacaulis, Methylibium and Methylophilus.

Taxon: Floating Macrophytest0
Organ / stage: phyllospheree1
Interactor: Acidovorax, Asticcacaulis, Methylibium, and MethylophilusMethylophilusAcidovoraxAsticcacaulisMethylibiume1other
Outcome: core microbiomee1

Verbatim

t0
“Floating Macrophytes”
✓ located verbatim in the source · title, characters 36–56

e1
“The core microbiome in the phyllosphere contained genera such as Acidovorax, Asticcacaulis, Methylibium, and Methylophilus”
✓ located verbatim in the source · abstract, characters 603–725

Title

Phyllosphere Bacterial Community of Floating Macrophytes in Paddy Soil Environments as Revealed by Illumina High-Throughput Sequencing

Wan-Ying Xie; Jian-Qiang Su; Yong-Guan Zhu Applied and Environmental Microbiology 2014. doi:10.1128/aem.03191-14

Other claims from this paper (7)

Methylophilus 4 claims

4 claims