Taxillus nigrans 22 claims

species · family Loranthaceae · green plant · NCBI Taxonomy ↗

NCBI synonyms: Loranthus nigrans

2 spellings

22 claims

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Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Chloroplast genomes of Taxillus nigrans and Scurrula parasitica were sequenced for the first time.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: chloroplast genomese0
Comparator: first timee0

Not reportedValue

Verbatim

e0
“sequenced the chloroplast genomes of Taxillus nigrans and Scurrula parasitica for the first time”
✓ located verbatim in the source · abstract, characters 406–502

Title

Comparative Analyses of Chloroplast Genomes for Parasitic Species of Santalales in the Light of Two Newly Sequenced Species, Taxillus nigrans and Scurrula parasitica

Ximing Yue; Ning Miao; Zilu Fan; et al. Genes 2023. doi:10.3390/genes14030560

Other claims from this paper (10)

Observation The chloroplast genomes showed a quadripartite structure.
Observation The twelve Santalales species grouped into three phylogenetic clades.
Observation Viscum, Osyris and Champereia grouped in one clade.
Observation Taxillus, Scurrula and Schoepfia grouped in another clade.
Observation Erythropalum was the most distant third clade.
Observation Viscum and Taxillus were each monophyletic.
Observation Scurrula was sister to Taxillus.
Observation Chloroplast genomes differed in size and gene losses.
Observation Twelve species formed six categories based on chloroplast gene features.
Observation Most photosynthesis genes were retained across the twelve species.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genomes showed a quadripartite structure.

Taxon: Taxillus nigransTaxillus nigranst0
Outcome: typical quadripartite structural organizatione0

Verbatim

e0
“The chloroplast genomes for these species showed typical quadripartite structural organization.”
✓ located verbatim in the source · abstract, characters 504–599

t0
“Taxillus nigrans”
✓ located verbatim in the source · title, characters 125–141

Title

Comparative Analyses of Chloroplast Genomes for Parasitic Species of Santalales in the Light of Two Newly Sequenced Species, Taxillus nigrans and Scurrula parasitica

Ximing Yue; Ning Miao; Zilu Fan; et al. Genes 2023. doi:10.3390/genes14030560

Other claims from this paper (10)

Method / resource Chloroplast genomes of Taxillus nigrans and Scurrula parasitica were sequenced for the first time.
Observation The twelve Santalales species grouped into three phylogenetic clades.
Observation Viscum, Osyris and Champereia grouped in one clade.
Observation Taxillus, Scurrula and Schoepfia grouped in another clade.
Observation Erythropalum was the most distant third clade.
Observation Viscum and Taxillus were each monophyletic.
Observation Scurrula was sister to Taxillus.
Observation Chloroplast genomes differed in size and gene losses.
Observation Twelve species formed six categories based on chloroplast gene features.
Observation Most photosynthesis genes were retained across the twelve species.

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The complete chloroplast genome measured 121,419 bp.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: complete cp genomee1
Value: 121,419 bpe1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“The complete cp genome was 121,419 bp in length”
✓ located verbatim in the source · abstract, characters 291–338

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The large single copy region measured 70,181 bp.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: large single copy (LSC) regione1
Value: 70,181 bpe1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“a large single copy (LSC) region of 70,181 bp”
✓ located verbatim in the source · abstract, characters 351–396

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The small single copy region measured 6100 bp.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: small single copy (SSC) regione1
Value: 6100 bpe1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“a small single copy (SSC) region of 6100 bp”
✓ located verbatim in the source · abstract, characters 401–444

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Each inverted repeat region measured 22,569 bp.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: inverted repeat (IRs) regionse1
Value: 22,569 bpe1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“a pair of 22,569 bp inverted repeat (IRs) regions”
✓ located verbatim in the source · abstract, characters 470–519

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contained 106 genes.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: genese1
Value: 106 genese1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“The genome contained 106 genes”
✓ located verbatim in the source · abstract, characters 521–551

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contained 66 protein-coding genes.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: protein-coding genese1
Value: 66 protein-coding genese1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“66 protein-coding genes”
✓ located verbatim in the source · abstract, characters 563–586

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contained 28 tRNA genes.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: tRNA genese1
Value: 28 tRNA genese1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“28 tRNA genes”
✓ located verbatim in the source · abstract, characters 588–601

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 8 ribosomal RNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contained 8 ribosomal RNA genes.

Taxon: Taxillus nigransTaxillus nigranse0
Outcome: ribosomal RNA genese1
Value: 8 ribosomal RNA genese1

Verbatim

e0
“Taxillus nigrans (Hance) Danser”
✓ located verbatim in the source · abstract, characters 0–31

e1
“8 ribosomal RNA genes”
✓ located verbatim in the source · abstract, characters 603–624

Title

Characterization of the complete chloroplast genome of Taxillus nigrans

Shuyi Zhao; Jialiang Li; Rui Ma; et al. Mitochondrial DNA Part B 2019. doi:10.1080/23802359.2018.1536485

Other claims from this paper (15)

Method / resource The complete chloroplast genome measured 121,419 bp.
Observation The large single copy region measured 70,181 bp.
Observation The small single copy region measured 6100 bp.
Observation Each inverted repeat region measured 22,569 bp.
Observation The genome contained 106 genes.
Observation The genome contained 66 protein-coding genes.
Observation The genome contained 28 tRNA genes.
Observation The genome contained 4 pseudogenes.
Observation Most gene species occurred as single copies.
Observation Fifteen gene species occurred in double copies.
Observation Overall chloroplast genome GC content was 37.4%.
Observation The LSC GC content was 34.8%.
Observation The SSC GC content was 26.3%.
Observation The IR GC content was 42.95%.
Observation Phylogenetic analysis placed T. nigrans close to T. sutchuenensis with strong support.