By organism › Fungi › Hypocreaceae › Trichoderma atroviride

Observationobservedoriginal resultmeasured

Claim · model-written summary

Trichoderma atroviride showed reprogramming of membrane transport and primary metabolism.

Taxon: Trichoderma atrovirideTrichoderma atroviridee0
Interactor: Arabidopsis thalianaArabidopsis thalianae0host
Outcome: reprogramming of membrane transport and primary metabolisme1

Verbatim

e0
“the interaction between Arabidopsis thaliana and the growth-promoting fungus Trichoderma atroviride”
✓ located verbatim in the source · abstract, characters 332–431

e1
“fungal reprogramming of membrane transport and primary metabolism”
✓ located verbatim in the source · abstract, characters 686–751

Title

Integrated Gene Regulatory Network Analysis Reveals Coordinated Transcriptional Reprogramming in the Arabidopsis thaliana–Trichoderma atroviride Interaction

Evelyn Sánchez; Lorena Melet; José D. Fernández; et al. Plants 2026. doi:10.3390/plants15040533

Other claims from this paper (7)

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Putative fungal orthologs of developmental and stress-related TFs, such as CrzA, RME1, NsdC, PacC and RPN4, formed a regulatory core coordinating fungal transport and metabolic adjustment.

Taxon: Trichoderma atrovirideTrichoderma atroviridee0
Interactor: Arabidopsis thalianaArabidopsis thalianae0host
Gene: CrzA, RME1, NsdC, PacC and RPN4e1
Outcome: fungal transport and metabolic adjustmente1

Verbatim

e0
“the interaction between Arabidopsis thaliana and the growth-promoting fungus Trichoderma atroviride”
✓ located verbatim in the source · abstract, characters 332–431

e1
“the putative orthologs of TFs involved in developmental and stress-related TFs in fungi, such as CrzA, RME1, NsdC, PacC and RPN4, formed a regulatory core coordinating fungal transport and metabolic adjustment”
✓ located verbatim in the source · abstract, characters 1095–1304

Title

Integrated Gene Regulatory Network Analysis Reveals Coordinated Transcriptional Reprogramming in the Arabidopsis thaliana–Trichoderma atroviride Interaction

Evelyn Sánchez; Lorena Melet; José D. Fernández; et al. Plants 2026. doi:10.3390/plants15040533

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

T. atroviride showed a strong induction of 20-22 nt sRNAs.

Taxon: T. atrovirideTrichoderma atroviridee1
Interactor: Arabidopsis thalianaArabidopsis thalianae0host
Outcome: 20–22 nt sRNAse1
Direction: inductione1

Verbatim

e0
“the interaction between Arabidopsis thaliana and the growth-promoting fungus Trichoderma atroviride”
✓ located verbatim in the source · abstract, characters 332–431

e1
“T. atroviride exhibited a strong induction of 20–22 nt sRNAs”
✓ located verbatim in the source · abstract, characters 1429–1489

Title

Integrated Gene Regulatory Network Analysis Reveals Coordinated Transcriptional Reprogramming in the Arabidopsis thaliana–Trichoderma atroviride Interaction

Evelyn Sánchez; Lorena Melet; José D. Fernández; et al. Plants 2026. doi:10.3390/plants15040533

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

T. atroviride sRNAs included a small set of high-confidence sRNA-mRNA interactions targeting host genes involved in root function and immunity.

Taxon: T. atrovirideTrichoderma atroviridee1
Interactor: Arabidopsis thalianaArabidopsis thalianae0host
Outcome: high-confidence sRNA–mRNA interactions targeting host genes involved in root function and immunitye1

Verbatim

e0
“the interaction between Arabidopsis thaliana and the growth-promoting fungus Trichoderma atroviride”
✓ located verbatim in the source · abstract, characters 332–431

e1
“T. atroviride exhibited a strong induction of 20–22 nt sRNAs, including a small set of high-confidence sRNA–mRNA interactions targeting host genes involved in root function and immunity”
✓ located verbatim in the source · abstract, characters 1429–1614

Title

Integrated Gene Regulatory Network Analysis Reveals Coordinated Transcriptional Reprogramming in the Arabidopsis thaliana–Trichoderma atroviride Interaction

Evelyn Sánchez; Lorena Melet; José D. Fernández; et al. Plants 2026. doi:10.3390/plants15040533

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus developed dense hyphae on and within perlite, forming beads.

Taxon: Trichoderma atroviride 1607Trichoderma atroviridee1
Outcome: dense hyphaee0

Verbatim

e0
“the fungus exhibited dense hyphae both on the surface and within the pores of perlite, forming the well-developed fungus-assembling beads 1607Ec”
✓ located verbatim in the source · abstract, characters 715–859

e1
“We previously isolated Trichoderma atroviride 1607 from the moss Brachythecium piligerum capable of reducing environmental salinity, while its efficiency in crop rhizosphere colonization was quite low. To improve its activity in enhancing crop salt tolerance, we introduced the synthetic Escherichia coli strain EcCMC, which exposed artificial glucan-binding protein to provide physical contacts between the fungal hypha…” Show full quote
✓ located verbatim in the source · abstract, characters 219–1630

Title

Synthetic biology-assisted fungus-assembling beads for regulating rhizosphere microbiome and improving plant growth in saline soil

Yuxin Ji; Shuo Liu; Zirun Zhao; et al. Environmental Technology & Innovation 2025. doi:10.1016/j.eti.2025.104343

Other claims from this paper (7)

Intervention effect 1607Ec reduced soil salinity in cabbage cultivation.
Intervention effect 1607Ec improved soil enzyme activity and organic matter content in cabbage cultivation.
Intervention effect 1607Ec improved cabbage leaf chlorophyll content and plant weight.
Intervention effect 1607Ec increased Hypocreaceae, particularly Trichoderma, in the cabbage rhizosphere.
Intervention effect 1607Ec increased the Simpson index of cabbage rhizosphere bacterial composition.
Intervention effect Polysaccharide-producing bacterial families increased in the 1607Ec group.
Intervention effect 1607Ec promoted growth of Poaceae crops in saline soil.

Observationobservedoriginal resultmeasured

Claim · model-written summary

CMU-08 grew and conidiated across the stated temperature and pH ranges.

Taxon: Trichoderma atrovirideTrichoderma atroviridet0
Outcome: robust growth and conidiatione0
Value: 16 to 32 °Ce0
Qualifier: a pH range from 4 to 9e0
Setting: potato dextrose agar (PDA) and malt extract agar (MEA) mediae0

Verbatim

e0
“CMU-08 demonstrated robust growth and conidiation across a temperature range from 16 to 32 °C and a pH range from 4 to 9 on potato dextrose agar (PDA) and malt extract agar (MEA) media.”
✓ located verbatim in the source · abstract, characters 115–300

t0
“Trichoderma atroviride”
✓ located verbatim in the source · title, characters 77–99

Title

Polyphasic Characterization of the Biocontrol Potential of a Novel Strain of Trichoderma atroviride Isolated from Central Mexico

Karla Ivonne González-Martínez; Ma. Soledad Vázquez-Garcidueñas; Alfredo Herrera-Estrella; et al. Journal of Fungi 2024. doi:10.3390/jof10110758

Other claims from this paper (10)

Observation CMU-08 antagonized six phytopathogenic fungi and oomycetes in culture.
Observation CMU-08 directly mycoparasitized test pathogens in dual culture.
Observation CMU-08 volatile and nonvolatile metabolites inhibited pathogen growth with effectiveness depending on organism and medium.
Intervention effect CMU-08 extracellular filtrates inhibited pathogen growth at 750 µg/mL.
Intervention effect CMU-08 extracellular filtrates reduced Botrytis foliar damage on detached tomato leaves by 24–34%.
Intervention effect CMU-08 volatiles reduced Botrytis foliar damage in detached tomato leaves by up to 50%.
Observation CMU-08 lacked basal extracellular chitinase activity.
Intervention effect Pathogen cell walls significantly induced CMU-08 chitinase activity.
Observation Four CMU-08 chitinase genes differed in transcriptional responses by pathogen and interaction stage.
Recommendation The authors identify CMU-08 as a candidate for field biocontrol product development.

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

CMU-08 antagonized six phytopathogenic fungi and oomycetes in culture.

Taxon: Trichoderma atrovirideTrichoderma atroviridet0
Outcome: efficient antagoniste0
Value: six speciese0
Setting: PDA, MEA, and Vogel minimal medium (VMM)e0

Verbatim

e0
“The strain is an efficient antagonist of six species of phytopathogenic fungi and oomycetes in PDA, MEA, and Vogel minimal medium (VMM).”
✓ located verbatim in the source · abstract, characters 301–437

t0
“Trichoderma atroviride”
✓ located verbatim in the source · title, characters 77–99

Title

Polyphasic Characterization of the Biocontrol Potential of a Novel Strain of Trichoderma atroviride Isolated from Central Mexico

Karla Ivonne González-Martínez; Ma. Soledad Vázquez-Garcidueñas; Alfredo Herrera-Estrella; et al. Journal of Fungi 2024. doi:10.3390/jof10110758

Other claims from this paper (10)

Observation CMU-08 grew and conidiated across the stated temperature and pH ranges.
Observation CMU-08 directly mycoparasitized test pathogens in dual culture.
Observation CMU-08 volatile and nonvolatile metabolites inhibited pathogen growth with effectiveness depending on organism and medium.
Intervention effect CMU-08 extracellular filtrates inhibited pathogen growth at 750 µg/mL.
Intervention effect CMU-08 extracellular filtrates reduced Botrytis foliar damage on detached tomato leaves by 24–34%.
Intervention effect CMU-08 volatiles reduced Botrytis foliar damage in detached tomato leaves by up to 50%.
Observation CMU-08 lacked basal extracellular chitinase activity.
Intervention effect Pathogen cell walls significantly induced CMU-08 chitinase activity.
Observation Four CMU-08 chitinase genes differed in transcriptional responses by pathogen and interaction stage.
Recommendation The authors identify CMU-08 as a candidate for field biocontrol product development.

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

CMU-08 directly mycoparasitized test pathogens in dual culture.

Taxon: Trichoderma atrovirideTrichoderma atroviridet0
Outcome: direct mycoparasitisme0
Setting: dual-culture assayse0

Verbatim

e0
“Antagonist mechanisms of CMU-08 included direct mycoparasitism observed in dual-culture assays, as well as antibiosis attributed to growth inhibition via both volatile and non-volatile metabolites, with the effectiveness varying depending on the test phytopathogen and culture medium.”
✓ located verbatim in the source · abstract, characters 438–722

t0
“Trichoderma atroviride”
✓ located verbatim in the source · title, characters 77–99

Title

Polyphasic Characterization of the Biocontrol Potential of a Novel Strain of Trichoderma atroviride Isolated from Central Mexico

Karla Ivonne González-Martínez; Ma. Soledad Vázquez-Garcidueñas; Alfredo Herrera-Estrella; et al. Journal of Fungi 2024. doi:10.3390/jof10110758

Other claims from this paper (10)

Observation CMU-08 grew and conidiated across the stated temperature and pH ranges.
Observation CMU-08 antagonized six phytopathogenic fungi and oomycetes in culture.
Observation CMU-08 volatile and nonvolatile metabolites inhibited pathogen growth with effectiveness depending on organism and medium.
Intervention effect CMU-08 extracellular filtrates inhibited pathogen growth at 750 µg/mL.
Intervention effect CMU-08 extracellular filtrates reduced Botrytis foliar damage on detached tomato leaves by 24–34%.
Intervention effect CMU-08 volatiles reduced Botrytis foliar damage in detached tomato leaves by up to 50%.
Observation CMU-08 lacked basal extracellular chitinase activity.
Intervention effect Pathogen cell walls significantly induced CMU-08 chitinase activity.
Observation Four CMU-08 chitinase genes differed in transcriptional responses by pathogen and interaction stage.
Recommendation The authors identify CMU-08 as a candidate for field biocontrol product development.

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

CMU-08 volatile and nonvolatile metabolites inhibited pathogen growth with effectiveness depending on organism and medium.

Taxon: Trichoderma atrovirideTrichoderma atroviridet0
Outcome: growth inhibitione0
Direction: inhibitione0
Qualifier: effectiveness varying depending on the test phytopathogen and culture mediume0

Verbatim

e0
“Antagonist mechanisms of CMU-08 included direct mycoparasitism observed in dual-culture assays, as well as antibiosis attributed to growth inhibition via both volatile and non-volatile metabolites, with the effectiveness varying depending on the test phytopathogen and culture medium.”
✓ located verbatim in the source · abstract, characters 438–722

t0
“Trichoderma atroviride”
✓ located verbatim in the source · title, characters 77–99

Title

Polyphasic Characterization of the Biocontrol Potential of a Novel Strain of Trichoderma atroviride Isolated from Central Mexico

Karla Ivonne González-Martínez; Ma. Soledad Vázquez-Garcidueñas; Alfredo Herrera-Estrella; et al. Journal of Fungi 2024. doi:10.3390/jof10110758

Other claims from this paper (10)

Observation CMU-08 grew and conidiated across the stated temperature and pH ranges.
Observation CMU-08 antagonized six phytopathogenic fungi and oomycetes in culture.
Observation CMU-08 directly mycoparasitized test pathogens in dual culture.
Intervention effect CMU-08 extracellular filtrates inhibited pathogen growth at 750 µg/mL.
Intervention effect CMU-08 extracellular filtrates reduced Botrytis foliar damage on detached tomato leaves by 24–34%.
Intervention effect CMU-08 volatiles reduced Botrytis foliar damage in detached tomato leaves by up to 50%.
Observation CMU-08 lacked basal extracellular chitinase activity.
Intervention effect Pathogen cell walls significantly induced CMU-08 chitinase activity.
Observation Four CMU-08 chitinase genes differed in transcriptional responses by pathogen and interaction stage.
Recommendation The authors identify CMU-08 as a candidate for field biocontrol product development.

Observationobservedoriginal resultmeasured

Claim · model-written summary

CMU-08 lacked basal extracellular chitinase activity.

Taxon: Trichoderma atrovirideTrichoderma atroviridet0
Gene: chitinasee0
Outcome: basal extracellular chitinase enzymatic activitye0
Direction: noe0

Verbatim

e0
“Despite showing no basal extracellular chitinase enzymatic activity, CMU-08 demonstrated significant induction of this activity in cultures supplemented with B. cinerea and Fusarium sp. cell walls.”
✓ located verbatim in the source · abstract, characters 1189–1386

t0
“Trichoderma atroviride”
✓ located verbatim in the source · title, characters 77–99

Title

Polyphasic Characterization of the Biocontrol Potential of a Novel Strain of Trichoderma atroviride Isolated from Central Mexico

Karla Ivonne González-Martínez; Ma. Soledad Vázquez-Garcidueñas; Alfredo Herrera-Estrella; et al. Journal of Fungi 2024. doi:10.3390/jof10110758

Other claims from this paper (10)

Observation CMU-08 grew and conidiated across the stated temperature and pH ranges.
Observation CMU-08 antagonized six phytopathogenic fungi and oomycetes in culture.
Observation CMU-08 directly mycoparasitized test pathogens in dual culture.
Observation CMU-08 volatile and nonvolatile metabolites inhibited pathogen growth with effectiveness depending on organism and medium.
Intervention effect CMU-08 extracellular filtrates inhibited pathogen growth at 750 µg/mL.
Intervention effect CMU-08 extracellular filtrates reduced Botrytis foliar damage on detached tomato leaves by 24–34%.
Intervention effect CMU-08 volatiles reduced Botrytis foliar damage in detached tomato leaves by up to 50%.
Intervention effect Pathogen cell walls significantly induced CMU-08 chitinase activity.
Observation Four CMU-08 chitinase genes differed in transcriptional responses by pathogen and interaction stage.
Recommendation The authors identify CMU-08 as a candidate for field biocontrol product development.

Trichoderma atroviride 36 claims

36 claims