Paper · 2011 · Queensland's institutional digital repository (The University of Queensland)

Carbon Mobilisation and Utilisation in the Sugarcane Biofactory

Brian Patrick O’Neill

19
claims
38
verbatim quotes
2
citations
2
research areas
—
Not open access

Abstract

Heterotrophic axillary bud outgrowth from sugarcane (Saccharum spp. hybrids) setts was used as a model system to demonstrate that sucrose is a mobilisable carbon source. The outgrowth and subsequent biomass accumulation of axillary buds from two-eye setts of mature sugarcane stalks grown in the dark was used to measure carbon mobilisation from sett internode pith tissue. After 42 days growth 99.0 ± 0.72% of sett internode pith sucrose was depleted and 2.66 ± 0.16g of new tissue accumulated. Comparison with a control treatment in which axillary buds were excised at day zero demonstrated that carbon mobilisation was driven by the accumulation of new biomass. Profiling of soluble carbohydrates (viz. sucrose, glucose and fructose), starch, total soluble protein, total amino nitrogen, free amino acids and total insoluble material showed that the sucrose stored in the sett internode pith was the only available carbon source of sufficient size at day zero for the observed biomass accumulation. Other metabolites mobilised were glucose, fructose and some amino acids, notably isoleucine and leucine that were depleted in shoot treatment setts at day 42. Because sucrose stored in mature stalks (in excess of 40 % of stalk dry weight) can be wholly mobilised to supply carbon for the growth of heterotrophic tissues we propose that sucrose mobilisation requires a net sink-to-source transition that acts in toto within sett internode storage parenchyma. From our data it is proposed that mobilisation of sucrose from culm storage parenchyma requires minimal investment of metabolic resources and that the mechanism of sucrose mobilisation is metabolically neutral. Using magnetic resonance spectroscopy and phloem-specific tracer dyes, strong evidence is provided that sucrose is mobilised from sett storage parenchyma via phloem to the growing shoot tissue. Analysis of enzyme activities involved in sucrose metabolism and glycolysis suggest that sucrose synthase activity is down-regulated due to the effects of sucrose mobilisation. Overall, metabolism in storage parenchyma shifts from futile cycling to a more quiescent state during sucrose mobilisation. Trehalose metabolism in sugarcane was engineered in an attempt to create a significant carbon drain of stored sucrose, to impart value added properties and to enhance abiotic stress tolerance. Two transgenes were introduced to the genome: Trehalose-6-phosphate synthase/phosphatase (TPSP) to increase trehalose biosynthesis and an RNAi transgene specific for trehalase to abrogate trehalose catabolism. Plants phenotypically indistinguishable from the wild type plants were recovered that harboured each transgene singularly but no events of co-integration were observed in a total of 14 transgenic lines recovered after bombardment with both constructs. Soluble carbohydrate content was unaffected. Expression of trehalase was abrogated in many lines due to the RNAi transgene; however, no decrease in trehalase activity was observed. A trehalase inhibitor, sufficient to cease porcine trehalase activity wholly, decreased trehalase activity in sugarcane pith tissue extracts by 80%. Trehalose biosynthesis activity in TPSP lines was elevated compared to RNAi lines and the difference bordered on significance (P = 0.080). A positive correlation between TPSP and trehalase activity was present in RNAi transformants that detectably expressed trehalase (Pearson correlation co-efficient = 0.720, P = 0.107). We discuss the implications for engineering trehalose metabolism in terms of an embryonic lethal phenotype due to altered trehalose metabolism.

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Claims 19

Observationobservedoriginal resultmeasured

Claim · model-written summary

Sett internode pith sucrose was 99.0% depleted after 42 days of bud outgrowth.

Taxon
Sugarcanet0
Organ / stage
sett internode pithe1
Outcome
sett internode pith sucrosee1
Value
99.0 ± 0.72%e1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“After 42 days growth 99.0 ± 0.72% of sett internode pith sucrose was depleted and 2.66 ± 0.16g of new tissue accumulated”

✓ located verbatim in the source · abstract, characters 374–494 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Axillary bud outgrowth accumulated 2.66 g of new tissue after 42 days.

Taxon
Sugarcanet0
Outcome
new tissuee2
Value
2.66 ± 0.16ge2

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e2

“2.66 ± 0.16g of new tissue accumulated”

✓ located verbatim in the source · abstract, characters 456–494 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Carbon mobilisation was driven by the accumulation of new biomass, as shown by comparison with excised buds.

Taxon
Sugarcanet0
Outcome
carbon mobilisatione3
Qualifier
driven by the accumulation of new biomasse3
Comparator
axillary buds were excised at day zeroe3

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e3

“Comparison with a control treatment in which axillary buds were excised at day zero demonstrated that carbon mobilisation was driven by the accumulation of new biomass”

✓ located verbatim in the source · abstract, characters 496–663 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Stored sucrose was the only available carbon source of sufficient size at day zero for the biomass accumulation.

Taxon
Sugarcanet0
Organ / stage
sett internode pithe4
Compound
sucrosee4
Outcome
available carbon source of sufficient sizee4

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e4

“the sucrose stored in the sett internode pith was the only available carbon source of sufficient size at day zero”

✓ located verbatim in the source · abstract, characters 849–962 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Isoleucine and leucine were depleted in shoot treatment setts at day 42.

Taxon
Sugarcanet0
Outcome
isoleucine and leucinee5
Qualifier
depleted in shoot treatment setts at day 42e5

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e5

“notably isoleucine and leucine that were depleted in shoot treatment setts at day 42”

✓ located verbatim in the source · abstract, characters 1075–1159 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Sucrose mobilisation is proposed to require a net sink-to-source transition in the storage parenchyma.

Taxon
Sugarcanet0
Outcome
sucrose mobilisatione6
Qualifier
requires a net sink-to-source transitione6

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e6

“we propose that sucrose mobilisation requires a net sink-to-source transition that acts in toto within sett internode storage parenchyma”

✓ located verbatim in the source · abstract, characters 1322–1458 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Sucrose mobilisation from culm storage parenchyma is proposed to require minimal metabolic investment.

Taxon
Sugarcanet0
Outcome
mobilisation of sucrose from culm storage parenchymae7
Qualifier
requires minimal investment of metabolic resourcese7

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e7

“From our data it is proposed that mobilisation of sucrose from culm storage parenchyma requires minimal investment of metabolic resources”

✓ located verbatim in the source · abstract, characters 1460–1597 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The mechanism of sucrose mobilisation is proposed to be metabolically neutral.

Taxon
Sugarcanet0
Outcome
mechanism of sucrose mobilisatione1
Qualifier
metabolically neutrale1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“the mechanism of sucrose mobilisation is metabolically neutral”

✓ located verbatim in the source · abstract, characters 1607–1669 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sucrose is mobilised from sett storage parenchyma via phloem to the growing shoot tissue.

Taxon
Sugarcanet0
Outcome
sucrose is mobilised from sett storage parenchyma via phloem to the growing shoot tissuee1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Using magnetic resonance spectroscopy and phloem-specific tracer dyes, strong evidence is provided that sucrose is mobilised from sett storage parenchyma via phloem to the growing shoot tissue”

✓ located verbatim in the source · abstract, characters 1671–1863 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Sucrose synthase activity is down-regulated by sucrose mobilisation.

Taxon
Sugarcanet0
Gene
sucrose synthasee1
Outcome
sucrose synthase activitye1
Direction
down-regulatede1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Analysis of enzyme activities involved in sucrose metabolism and glycolysis suggest that sucrose synthase activity is down-regulated due to the effects of sucrose mobilisation”

✓ located verbatim in the source · abstract, characters 1865–2040 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Storage parenchyma metabolism shifts from futile cycling to a more quiescent state during sucrose mobilisation.

Taxon
Sugarcanet0
Organ / stage
storage parenchymae1
Outcome
shifts from futile cycling to a more quiescent statee1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Overall, metabolism in storage parenchyma shifts from futile cycling to a more quiescent state during sucrose mobilisation”

✓ located verbatim in the source · abstract, characters 2042–2164 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Transgenic plants carrying each transgene singly were phenotypically indistinguishable from wild type.

Taxon
Sugarcanet0
Outcome
phenotypically indistinguishable from the wild type plantse1
Comparator
wild type plantse1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Plants phenotypically indistinguishable from the wild type plants were recovered that harboured each transgene singularly”

✓ located verbatim in the source · abstract, characters 2569–2690 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

No co-integration events were observed among 14 transgenic lines.

Taxon
Sugarcanet0
Outcome
events of co-integratione1
Qualifier
in a total of 14 transgenic linese1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“no events of co-integration were observed in a total of 14 transgenic lines recovered after bombardment with both constructs”

✓ located verbatim in the source · abstract, characters 2695–2819 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The RNAi transgene abrogated trehalase expression in many lines.

Taxon
Sugarcanet0
Treatment
RNAi transgenee1
Outcome
Expression of trehalasee1
Direction
abrogatede1

Not reportedComparator

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Expression of trehalase was abrogated in many lines due to the RNAi transgene”

✓ located verbatim in the source · abstract, characters 2866–2943 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

No decrease in trehalase activity was observed in the RNAi lines.

Taxon
Sugarcanet0
Outcome
trehalase activitye1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“no decrease in trehalase activity was observed”

✓ located verbatim in the source · abstract, characters 2954–3000 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

A trehalase inhibitor decreased trehalase activity in sugarcane pith extracts by 80%.

Taxon
Sugarcanet0
Organ / stage
pith tissue extractse1
Treatment
trehalase inhibitore1
Outcome
trehalase activity in sugarcane pith tissue extractse1
Direction
decreasede1
Value
80%e1

Not reportedComparator

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“A trehalase inhibitor, sufficient to cease porcine trehalase activity wholly, decreased trehalase activity in sugarcane pith tissue extracts by 80%”

✓ located verbatim in the source · abstract, characters 3002–3149 · show in text ↑
Intervention effectobservedoriginal resultnot significant (as stated)measured

Claim · model-written summary

Trehalose biosynthesis activity was elevated in TPSP lines compared with RNAi lines, borderline significant.

Taxon
Sugarcanet0
Treatment
TPSPe1
Outcome
Trehalose biosynthesis activitye1
Direction
elevatede1
Comparator
RNAi linese1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Trehalose biosynthesis activity in TPSP lines was elevated compared to RNAi lines and the difference bordered on significance (P = 0.080)”

✓ located verbatim in the source · abstract, characters 3151–3288 · show in text ↑
Associationobservedoriginal resultnot significant (as stated)measured

Claim · model-written summary

Trehalase activity was positively correlated with TPSP in RNAi transformants that expressed trehalase.

Taxon
Sugarcanet0
Material
RNAi transformantse1
Outcome
trehalase activitye1
Direction
positivee1
Value
0.720e1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“A positive correlation between TPSP and trehalase activity was present in RNAi transformants that detectably expressed trehalase (Pearson correlation co-efficient = 0.720, P = 0.107)”

✓ located verbatim in the source · abstract, characters 3290–3472 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Soluble carbohydrate content was unaffected by the transgenes.

Taxon
Sugarcanet0
Outcome
Soluble carbohydrate contente1

Verbatim

t0

“Sugarcane Biofactory”

✓ located verbatim in the source · title, characters 43–63 · show in text ↑
e1

“Soluble carbohydrate content was unaffected”

✓ located verbatim in the source · abstract, characters 2821–2864 · show in text ↑