Paper · 2011 · Plant Cell & Environment

Circadian control of root elongation and C partitioning in Arabidopsis thaliana

NIMA YAZDANBAKHSH; RONAN SULPICE; ALEXANDER GRAF; et al.

13
claims
27
verbatim quotes
159
citations
2
research areas
✓
Open access

Abstract

Plants grow in a light/dark cycle. We have investigated how growth is buffered against the resulting changes in the carbon supply. Growth of primary roots of Arabidopsis seedlings was monitored using time-resolved video imaging. The average daily rate of growth is increased in longer light periods or by addition of sugars. It responds slowly over days when the conditions are changed. The momentary rate of growth exhibits a robust diel oscillation with a minimum 8-9 h after dawn and a maximum towards the end of the night. Analyses with starch metabolism mutants show that starch turnover is required to maintain growth at night. A carbon shortfall leads to an inhibition of growth, which is not immediately reversed when carbon becomes available again. The diel oscillation persists in continuous light and is strongly modified in clock mutants. Central clock functions that depend on CCA1/LHY are required to set an appropriate rate of starch degradation and maintain a supply of carbon to support growth through to dawn, whereas ELF3 acts to decrease growth in the light period and promote growth in the night. Thus, while the overall growth rate depends on the carbon supply, the clock orchestrates diurnal carbon allocation and growth.

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Claims 13

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Longer light periods increased average daily root growth.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
longer light periodse0
Outcome
average daily rate of growthe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The average daily rate of growth is increased in longer light periods”

✓ located verbatim in the source · abstract, characters 229–298 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Added sugars increased average daily root growth.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
addition of sugarse0
Outcome
average daily rate of growthe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The average daily rate of growth is increased in longer light periods or by addition of sugars”

✓ located verbatim in the source · abstract, characters 229–323 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Root growth adjusted slowly over days after a change in conditions.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
responds slowly over dayse0
Qualifier
when the conditions are changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“It responds slowly over days when the conditions are changed”

✓ located verbatim in the source · abstract, characters 325–385 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Momentary root growth had a diel minimum 8-9 hours after dawn.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
momentary rate of growthe0
Direction
minimume0
Value
8-9 h after dawne0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The momentary rate of growth exhibits a robust diel oscillation with a minimum 8-9 h after dawn”

✓ located verbatim in the source · abstract, characters 387–482 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Momentary root growth peaked near the end of the night.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
maximume0
Direction
maximume0
Qualifier
towards the end of the nighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a maximum towards the end of the night”

✓ located verbatim in the source · abstract, characters 487–525 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Starch turnover was required to maintain root growth at night.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
maintain growth at nighte0
Qualifier
starch turnovere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“starch turnover is required to maintain growth at night”

✓ located verbatim in the source · abstract, characters 577–632 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

A carbon shortfall inhibited growth.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
carbon shortfalle0
Outcome
growthe0
Direction
inhibitione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A carbon shortfall leads to an inhibition of growth”

✓ located verbatim in the source · abstract, characters 634–685 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Growth inhibition persisted after carbon became available again.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
not immediately reversede0
Qualifier
when carbon becomes available againe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“which is not immediately reversed when carbon becomes available again”

✓ located verbatim in the source · abstract, characters 687–756 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The diel root growth oscillation persisted under continuous light.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
continuous lighte0
Outcome
diel oscillation persistse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The diel oscillation persists in continuous light”

✓ located verbatim in the source · abstract, characters 758–807 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Clock mutants strongly modified the diel root growth oscillation.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
clock mutantse0
Outcome
diel oscillatione1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“is strongly modified in clock mutants”

✓ located verbatim in the source · abstract, characters 812–849 · show in text ↑
e1

“The diel oscillation persists in continuous light”

✓ located verbatim in the source · abstract, characters 758–807 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

CCA1/LHY-dependent clock functions set an appropriate starch degradation rate and maintained carbon supply through dawn.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
CCA1/LHYe0
Outcome
rate of starch degradation and maintain a supply of carbone0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Central clock functions that depend on CCA1/LHY are required to set an appropriate rate of starch degradation and maintain a supply of carbon to support growth through to dawn”

✓ located verbatim in the source · abstract, characters 851–1026 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ELF3 decreased growth during the light period.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
ELF3e0
Outcome
decrease growthe0
Direction
decreasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ELF3 acts to decrease growth in the light period”

✓ located verbatim in the source · abstract, characters 1036–1084 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ELF3 promoted growth at night.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
ELF3e0
Outcome
promote growth in the nighte0
Direction
promotee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ELF3 acts to decrease growth in the light period and promote growth in the night”

✓ located verbatim in the source · abstract, characters 1036–1116 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 59–79 · show in text ↑

light · growth · Arabidopsis thaliana (thale cress)Results differ

44 papers: 30 positive, 14 negative or no effect

29 papers in the same direction as this paper · 14 in the opposite direction

  1. negative
  2. negative
  3. negative

40 papers more in this group

See all 44 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.