Paper · 2012 · Journal of Integrative Agriculture

Xoryp_08180 of Xanthomonas oryzae pv. oryzicola, Encoding a Hypothetical Protein, is Regulated by HrpG and HrpX and Required for Full Virulence in Rice

Yi-ping SHEN; Li-fang ZOU; Yu-rong LI; et al.

7
claims
18
verbatim quotes
8
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

Xanthomonas oryzae pv. oryzicola (Xoc) causes a destructive bacterial leaf streak disease in rice. Some of the gene products annotated as hypothetical proteins in the genome of Xoc may contribute to its virulence in rice. A mutant, Mxoc1679, screened from our previous Tn5-tagged mutant library for Xoc strain RS105, showed reduced virulence in rice. In this mutant, a gene named as Xoryp_08180 was disrupted by Tn5 insertion. Xoryp_08180 encodes a 1 306-aa hypothetical protein which is highly conserved in Xanthomonas spp. Non-polar mutation of Xoryp_08180 in RS105 strain led to a significant reduction in bacterial virulence and growth in rice, a delayed hypersensitive response (HR) in non-host tobacco, and a decrease in extracellular protease activity. The deficiencies above were restored to wild-type level in the complementary strain by expressing Xoryp_08180 in trans. In addition, the expression of Xoryp_08180 was repressed in hrpG and hrpX mutants in planta but not in a nutrient-rich condition. These results suggested that Xoryp_08180 is a virulence factor required for extracellular protease production, HR induction and full virulence of Xoc.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Mxoc1679 showed reduced virulence in rice.

Material
Mxoc1679e0
Interactor
Xoce0pathogen
Outcome
virulence in ricee0
Direction
reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“A mutant, Mxoc1679, screened from our previous Tn5-tagged mutant library for Xoc strain RS105, showed reduced virulence in rice.”

✓ located verbatim in the source · abstract, characters 222–350 · show in text ↑
t0

“Xanthomonas oryzae pv. oryzicola”

✓ located verbatim in the source · title, characters 15–47 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Xoryp_08180 encodes a conserved 1 306-aa hypothetical protein.

Gene
Xoryp_08180e0
Outcome
1 306-aa hypothetical proteine0
Qualifier
highly conserved in Xanthomonas spp.e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Xoryp_08180 encodes a 1 306-aa hypothetical protein which is highly conserved in Xanthomonas spp.”

✓ located verbatim in the source · abstract, characters 427–524 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 147–151 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mutation of Xoryp_08180 significantly reduced bacterial virulence and growth in rice.

Treatment
Non-polar mutation of Xoryp_08180e0
Interactor
RS105 straine0pathogen
Gene
Xoryp_08180e0
Outcome
bacterial virulence and growth in ricee0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Non-polar mutation of Xoryp_08180 in RS105 strain led to a significant reduction in bacterial virulence and growth in rice”

✓ located verbatim in the source · abstract, characters 525–647 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The mutation delayed hypersensitive response in non-host tobacco.

Treatment
Non-polar mutation of Xoryp_08180e1
Interactor
Xoce2pathogen
Outcome
hypersensitive response (HR)e0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“a delayed hypersensitive response (HR) in non-host tobacco”

✓ located verbatim in the source · abstract, characters 649–707 · show in text ↑
e1

“Non-polar mutation of Xoryp_08180 in RS105 strain”

✓ located verbatim in the source · abstract, characters 525–574 · show in text ↑
e2

“Xanthomonas oryzae pv. oryzicola (Xoc) causes a destructive bacterial leaf streak disease in rice.”

✓ located verbatim in the source · abstract, characters 0–98 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The mutation decreased extracellular protease activity.

Treatment
Non-polar mutation of Xoryp_08180e1
Interactor
Xoce2pathogen
Gene
Xoryp_08180e1
Outcome
extracellular protease activitye0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“a decrease in extracellular protease activity.”

✓ located verbatim in the source · abstract, characters 713–759 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 147–151 · show in text ↑
e1

“Non-polar mutation of Xoryp_08180 in RS105 strain”

✓ located verbatim in the source · abstract, characters 525–574 · show in text ↑
e2

“Xanthomonas oryzae pv. oryzicola (Xoc) causes a destructive bacterial leaf streak disease in rice.”

✓ located verbatim in the source · abstract, characters 0–98 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Complementation restored the reported deficiencies to wild-type level.

Treatment
expressing Xoryp_08180 in transe0
Interactor
Xoce1pathogen
Gene
Xoryp_08180e0
Outcome
deficiencies abovee0
Direction
restorede0
Comparator
wild-type levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The deficiencies above were restored to wild-type level in the complementary strain by expressing Xoryp_08180 in trans.”

✓ located verbatim in the source · abstract, characters 760–879 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 147–151 · show in text ↑
e1

“Xanthomonas oryzae pv. oryzicola (Xoc) causes a destructive bacterial leaf streak disease in rice.”

✓ located verbatim in the source · abstract, characters 0–98 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Xoryp_08180 expression was repressed in hrpG and hrpX mutants in planta but not in nutrient-rich conditions.

Material
hrpG and hrpX mutantse0
Interactor
Xoce1pathogen
Gene
Xoryp_08180e0
Outcome
expression of Xoryp_08180e0
Direction
repressede0
Qualifier
in planta but not in a nutrient-rich conditione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the expression of Xoryp_08180 was repressed in hrpG and hrpX mutants in planta but not in a nutrient-rich condition.”

✓ located verbatim in the source · abstract, characters 893–1009 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 147–151 · show in text ↑
e1

“Xanthomonas oryzae pv. oryzicola (Xoc) causes a destructive bacterial leaf streak disease in rice.”

✓ located verbatim in the source · abstract, characters 0–98 · show in text ↑

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.